Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15765

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
2,984,068	-		LU632_RS15760	0.47	+1.4
2,984,139	-		LU632_RS15760	0.53	+0.7
2,984,216	+		LU632_RS15760	0.59	+1.1
2,984,216	+		LU632_RS15760	0.59	+2.0
2,984,216	+		LU632_RS15760	0.59	+0.2
2,984,216	+		LU632_RS15760	0.59	-0.2
2,984,217	-		LU632_RS15760	0.59	-1.8
2,984,217	-		LU632_RS15760	0.59	-0.8
2,984,257	-		LU632_RS15760	0.62	-0.0
2,984,317	-		LU632_RS15760	0.67	-1.9
2,984,377	-		LU632_RS15760	0.72	-0.7
2,984,413	+		LU632_RS15760	0.75	+2.4
2,984,414	-		LU632_RS15760	0.75	-1.5
2,984,452	+		LU632_RS15760	0.78	-0.3
2,984,596	+		LU632_RS15760	0.90	-2.1
2,984,605	-				-0.5
2,984,706	-				+0.0
2,984,747	+				+1.7
2,984,748	-				+1.2
2,984,753	+				+1.9
2,984,773	+				+2.9
2,984,773	+				-4.1
2,984,795	-				-0.8
2,984,814	+				-3.4
2,984,841	+				-1.3
2,985,801	-		LU632_RS15765	0.82	-2.1
2,986,049	+				+0.2
2,986,049	+				+1.8
2,986,049	+				-0.6
2,986,049	+				+2.8
2,986,049	+				-0.0
2,986,093	+				+1.4
2,986,094	-				-0.8
2,986,125	+				-0.4
2,986,462	+				+0.1
2,986,462	+				+2.1
2,986,463	-				-1.1
2,986,566	+		LU632_RS15775	0.16	-0.3
2,986,572	+		LU632_RS15775	0.17	+2.1
2,986,572	+		LU632_RS15775	0.17	+0.2
2,986,573	-		LU632_RS15775	0.17	+2.8
2,986,587	-		LU632_RS15775	0.19	+2.5
2,986,591	+		LU632_RS15775	0.19	-0.7
2,986,591	+		LU632_RS15775	0.19	+1.8
2,986,664	-		LU632_RS15775	0.29	-0.5
2,986,687	+		LU632_RS15775	0.32	+1.6
2,986,688	-		LU632_RS15775	0.32	-1.3
2,986,720	+		LU632_RS15775	0.36	+1.5