Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15730

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
2,977,141	-				-3.1
2,977,154	-				-0.2
2,977,298	+				-0.5
2,977,388	+		LU632_RS15730	0.27	-1.0
2,977,449	+		LU632_RS15730	0.39	-1.9
2,977,452	+		LU632_RS15730	0.39	-1.5
2,977,509	-		LU632_RS15730	0.51	+0.7
2,977,551	-		LU632_RS15730	0.59	-0.7
2,977,633	+		LU632_RS15730	0.75	+0.9
2,977,634	-		LU632_RS15730	0.75	-0.9
2,977,680	+		LU632_RS15730	0.84	-1.2
2,977,737	+				+0.1
2,977,750	-				-1.5
2,977,750	-				+0.0
2,977,775	+				-0.3
2,977,804	+				-0.9
2,977,805	-				-0.2
2,977,805	-				+0.8
2,977,820	+				+0.5
2,977,821	-				+0.5
2,977,868	+				-1.2
2,977,983	+				-1.5
2,978,085	+	recA	LU632_RS15735	0.18	-0.6