Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15325

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
2,903,581	+		LU632_RS15320	0.69	-3.1
2,903,583	+		LU632_RS15320	0.69	-2.7
2,903,683	+		LU632_RS15320	0.79	-0.2
2,903,754	+		LU632_RS15320	0.86	+0.8
2,903,754	+		LU632_RS15320	0.86	+2.1
2,903,755	-		LU632_RS15320	0.86	+0.6
2,903,769	-		LU632_RS15320	0.87	-0.2
2,903,772	+		LU632_RS15320	0.88	+0.1
2,903,772	+		LU632_RS15320	0.88	+1.6
2,903,772	+		LU632_RS15320	0.88	+1.3
2,903,772	+		LU632_RS15320	0.88	-0.2
2,903,773	-		LU632_RS15320	0.88	+2.5
2,903,773	-		LU632_RS15320	0.88	-0.3
2,903,774	+		LU632_RS15320	0.88	+0.4
2,903,775	-		LU632_RS15320	0.88	-0.7
2,903,838	-				+0.8
2,904,056	-		LU632_RS15325	0.44	-0.5
2,904,056	-		LU632_RS15325	0.44	-3.0
2,904,106	-		LU632_RS15325	0.57	-2.1
2,904,276	+				+0.3
2,904,291	+				+0.5
2,904,448	+		LU632_RS15330	0.70	-4.4
2,904,550	-				-1.6