Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15200

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
2,875,940	+				+0.6
2,875,966	-				-1.2
2,876,890	-				+0.5
2,877,008	+	ybcJ	LU632_RS15200	0.46	+2.1
2,877,008	+	ybcJ	LU632_RS15200	0.46	-1.9
2,877,086	-	ybcJ	LU632_RS15200	0.83	-2.2
2,877,114	-				+1.4
2,877,142	+				+1.8
2,877,142	+				-0.0
2,877,142	+				+0.2
2,877,143	-				+0.3
2,877,336	-				-1.3
2,877,343	+				+0.7
2,877,440	-				-0.1