Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14570

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
2,769,686	-				-1.2
2,769,697	-				-1.1
2,769,732	+				-0.7
2,769,732	+				+0.4
2,769,733	-				+2.2
2,769,733	-				-0.2
2,769,796	+				+0.4
2,769,928	+	rluE	LU632_RS14565	0.29	+0.3
2,769,947	+	rluE	LU632_RS14565	0.32	+2.0
2,769,947	+	rluE	LU632_RS14565	0.32	+0.4
2,770,059	-	rluE	LU632_RS14565	0.49	+0.7
2,770,135	+	rluE	LU632_RS14565	0.60	-0.1
2,770,135	+	rluE	LU632_RS14565	0.60	+2.4
2,770,217	-	rluE	LU632_RS14565	0.73	+3.4
2,770,217	-	rluE	LU632_RS14565	0.73	+0.1
2,770,234	+	rluE	LU632_RS14565	0.75	+0.5
2,770,235	-	rluE	LU632_RS14565	0.76	+0.6
2,770,235	-	rluE	LU632_RS14565	0.76	+0.4
2,770,240	+	rluE	LU632_RS14565	0.76	+0.4
2,770,240	+	rluE	LU632_RS14565	0.76	-2.0
2,770,240	+	rluE	LU632_RS14565	0.76	+3.0
2,770,372	+				+1.6
2,770,375	+				+0.4
2,770,376	-				-0.0
2,770,433	-				+0.8
2,770,489	-		LU632_RS14570	0.13	-1.2
2,770,584	-		LU632_RS14570	0.33	-0.4
2,770,654	+		LU632_RS14570	0.48	-3.8
2,770,654	+		LU632_RS14570	0.48	-2.9
2,770,906	+				+3.3