Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14510

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
2,761,016	+		LU632_RS14500	0.38	-0.7
2,761,016	+		LU632_RS14500	0.38	+1.4
2,761,017	-		LU632_RS14500	0.38	-2.2
2,761,111	-		LU632_RS14500	0.82	-1.4
2,761,115	-		LU632_RS14500	0.84	+1.7
2,761,115	-		LU632_RS14500	0.84	+0.4
2,761,115	-		LU632_RS14500	0.84	+1.4
2,761,169	-				-1.7
2,761,264	+				-0.3
2,761,265	-				-0.5
2,761,322	+				+1.3
2,761,398	+				+0.4
2,761,447	-				+0.6
2,761,447	-				+0.1
2,761,447	-				+1.4
2,761,533	+		LU632_RS14505	0.23	-2.9
2,761,533	+		LU632_RS14505	0.23	-0.4
2,761,657	+		LU632_RS14505	0.56	-1.6
2,761,658	-		LU632_RS14505	0.57	-4.5
2,761,865	-				+1.7
2,761,897	-				+1.3
2,761,947	+				+1.4
2,762,093	-		LU632_RS14510	0.26	-0.7
2,762,124	+		LU632_RS14510	0.30	+0.6
2,762,125	-		LU632_RS14510	0.30	+4.0
2,762,139	+		LU632_RS14510	0.32	-4.2
2,762,341	-		LU632_RS14510	0.56	-0.2
2,762,478	+		LU632_RS14510	0.73	-0.2
2,762,479	-		LU632_RS14510	0.73	+0.6
2,762,550	+		LU632_RS14510	0.81	+0.4
2,762,702	-				+1.7
2,762,715	+				+2.0
2,762,716	-				+1.3
2,762,716	-				-0.6
2,762,750	+				+0.4
2,762,763	-				+0.5
2,762,823	+				+1.6
2,762,832	+				+3.1
2,762,832	+				+1.3
2,762,832	+				+1.4
2,762,832	+				+2.3
2,762,832	+				-3.5
2,762,832	+				+0.0
2,762,833	-				-0.5
2,762,833	-				+1.7
2,762,833	-				-2.1
2,762,833	-				-0.6
2,762,833	-				-0.1
2,762,833	-				+2.5
2,762,833	-				+0.4
2,762,846	+				+0.3
2,762,934	-		LU632_RS14515	0.18	-0.6
2,762,990	-		LU632_RS14515	0.29	-1.6
2,763,058	-		LU632_RS14515	0.42	-0.1
2,763,058	-		LU632_RS14515	0.42	+0.4
2,763,110	+		LU632_RS14515	0.51	+0.4
2,763,147	+		LU632_RS14515	0.58	-1.2
2,763,148	-		LU632_RS14515	0.58	-0.1
2,763,154	+		LU632_RS14515	0.59	+0.2
2,763,190	-		LU632_RS14515	0.66	+0.4
2,763,291	-		LU632_RS14515	0.85	+1.9
2,763,291	-		LU632_RS14515	0.85	+0.1
2,763,490	-		LU632_RS14520	0.32	+0.4
2,763,656	+		LU632_RS14520	0.74	+1.2
2,763,656	+		LU632_RS14520	0.74	+0.9