Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14275

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
2,731,646	+				-0.9
2,731,647	-				+1.3
2,731,658	-				+1.4
2,731,810	-		LU632_RS14265	0.11	-1.2
2,731,821	-		LU632_RS14265	0.14	-0.0
2,731,821	-		LU632_RS14265	0.14	+1.0
2,731,990	-		LU632_RS14265	0.52	+0.4
2,731,995	+		LU632_RS14265	0.53	+1.3
2,732,086	-		LU632_RS14265	0.73	+0.4
2,732,107	+		LU632_RS14265	0.78	+0.9
2,732,140	+		LU632_RS14265	0.85	-0.6
2,732,241	-				+4.5
2,732,244	+				-2.4
2,732,261	+				+0.3
2,732,261	+				-0.6
2,732,304	-		LU632_RS14270	0.19	-1.2
2,732,325	-		LU632_RS14270	0.25	+1.0
2,732,440	+		LU632_RS14270	0.55	+2.1
2,732,465	+		LU632_RS14270	0.61	+0.2
2,732,604	+				-1.3
2,732,611	+				-0.6
2,732,718	+		LU632_RS14275	0.43	-2.6
2,732,816	+				+0.1
2,732,816	+				+1.7
2,732,816	+				+0.6
2,732,816	+				+0.3
2,732,817	-				-0.8
2,732,817	-				-1.6
2,733,019	-				-0.1
2,733,142	+		LU632_RS14280	0.16	-2.8
2,733,154	+		LU632_RS14280	0.19	+0.4
2,733,273	+		LU632_RS14280	0.52	-1.6
2,733,274	-		LU632_RS14280	0.53	+0.8
2,733,314	-		LU632_RS14280	0.64	-3.4
2,733,533	-		LU632_RS14285	0.39	+4.0
2,733,533	-		LU632_RS14285	0.39	-1.6
2,733,533	-		LU632_RS14285	0.39	-1.6
2,733,570	-		LU632_RS14285	0.55	+0.9
2,733,712	-				-3.3
2,733,770	+		LU632_RS14290	0.18	+0.4
2,733,804	+		LU632_RS14290	0.31	+0.9
2,733,805	-		LU632_RS14290	0.31	-0.8