Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14230

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
2,726,859	-				-2.6
2,726,907	+				-0.2
2,726,910	-				+0.0
2,726,910	-				+0.2
2,726,910	-				+0.8
2,726,910	-				+0.4
2,726,910	-				+0.0
2,726,910	-				-0.2
2,726,910	-				+0.9
2,727,169	-		LU632_RS14225	0.40	+0.9
2,728,243	-		LU632_RS14235	0.84	+4.4
2,728,584	+		LU632_RS14240	0.40	+2.9
2,728,584	+		LU632_RS14240	0.40	-0.5
2,728,835	+		LU632_RS14240	0.76	+1.4
2,728,835	+		LU632_RS14240	0.76	+0.2
2,728,848	+		LU632_RS14240	0.78	+1.0