Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13865

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
2,659,649	+				+3.3
2,659,650	-				-0.1
2,659,650	-				-1.8
2,659,652	-				-1.8
2,659,652	-				+0.4
2,659,672	-				+0.8
2,659,803	-		LU632_RS13860	0.16	+1.0
2,659,803	-		LU632_RS13860	0.16	-1.9
2,659,803	-		LU632_RS13860	0.16	+0.4
2,659,803	-		LU632_RS13860	0.16	+0.4
2,660,410	-		LU632_RS13860	0.88	+3.0
2,660,410	-		LU632_RS13860	0.88	-0.1
2,660,410	-		LU632_RS13860	0.88	+1.0
2,660,462	-				-1.9
2,660,548	+				-2.2
2,660,692	+		LU632_RS13865	0.25	-1.6
2,660,693	-		LU632_RS13865	0.25	+0.5
2,660,693	-		LU632_RS13865	0.25	+0.4
2,660,758	+		LU632_RS13865	0.43	-0.4
2,660,758	+		LU632_RS13865	0.43	+0.3
2,660,758	+		LU632_RS13865	0.43	+0.4
2,660,811	-		LU632_RS13865	0.58	+0.0
2,660,811	-		LU632_RS13865	0.58	+1.1
2,660,850	-		LU632_RS13865	0.69	-3.1
2,660,850	-		LU632_RS13865	0.69	+0.0
2,660,851	+		LU632_RS13865	0.69	-3.1
2,660,852	-		LU632_RS13865	0.70	-0.4
2,660,978	+				+1.1
2,660,979	-				+1.0
2,660,995	+				-1.3
2,660,998	+				-0.3
2,661,011	+				-3.4
2,661,012	-				+1.4
2,661,012	-				-1.6
2,661,012	-				+1.3
2,661,171	-		LU632_RS13870	0.35	+1.5
2,661,171	-		LU632_RS13870	0.35	-0.6
2,661,323	+		LU632_RS13870	0.68	-1.6
2,661,424	+		LU632_RS13870	0.90	+0.3
2,661,425	-				+0.9
2,661,433	-				+2.2
2,661,434	+				+1.3
2,661,435	+				+0.7
2,661,463	+				+0.1
2,661,660	-		LU632_RS13875	0.58	-0.2
2,661,897	-				+0.3