Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12910

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
2,461,121	-	hns	LU632_RS12905	0.49	+0.4
2,461,169	+	hns	LU632_RS12905	0.60	-0.6
2,461,218	+	hns	LU632_RS12905	0.73	+1.4
2,461,218	+	hns	LU632_RS12905	0.73	-2.4
2,461,327	-				-3.6
2,461,327	-				-0.6
2,461,340	-				-1.6
2,461,470	+				-2.2
2,461,575	+		LU632_RS12910	0.19	+0.4
2,461,636	+		LU632_RS12910	0.25	-0.6
2,461,675	+		LU632_RS12910	0.29	+0.4
2,461,676	-		LU632_RS12910	0.29	-1.6
2,461,731	+		LU632_RS12910	0.35	-1.6
2,461,732	-		LU632_RS12910	0.35	-0.6
2,461,766	+		LU632_RS12910	0.38	-0.6
2,461,767	-		LU632_RS12910	0.38	+0.7
2,461,773	-		LU632_RS12910	0.39	-1.9
2,461,894	-		LU632_RS12910	0.51	-2.4
2,462,383	-				-0.6
2,462,418	+				-2.5