Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11980

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
2,274,241	+				-1.5
2,274,304	+				-0.4
2,274,328	+				+0.9
2,274,329	-				-2.6
2,274,329	-				+0.9
2,274,332	-				+0.5
2,274,336	-				-3.2
2,274,345	-				-0.1
2,274,351	-				+0.3
2,274,351	-				-0.3
2,274,359	+				-0.9
2,274,435	+				+1.1
2,274,444	+				+0.5
2,274,463	+				+2.8
2,274,506	-		LU632_RS11980	0.10	-0.1
2,274,506	-		LU632_RS11980	0.10	+2.4
2,274,579	+		LU632_RS11980	0.63	+0.1