Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11095

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
2,123,655	+				+0.5
2,123,658	-				-1.2
2,123,658	-				+2.3
2,123,658	-				+2.9
2,123,658	-				-2.3
2,123,697	+				-0.2
2,123,764	+				-1.6
2,123,764	+				+1.1
2,123,764	+				+0.4
2,123,764	+				+1.1
2,123,765	-				+3.1
2,123,767	-				-0.9
2,123,767	-				+4.6
2,123,799	-				+0.5
2,123,869	-				-1.0
2,123,879	-				-1.4
2,124,172	+				-1.9
2,124,173	-				-0.3
2,124,222	+				-1.6
2,124,223	-				-2.2
2,124,226	+				+1.2
2,124,226	+				-1.9
2,124,226	+				+0.6
2,124,226	+				-0.1
2,124,227	-				-0.4
2,124,266	-				+2.7
2,124,267	+				-0.1
2,124,268	-				-0.2
2,124,268	-				-0.0
2,124,268	-				+0.4
2,124,268	-				-2.3
2,124,268	-				-1.5
2,124,268	-				+0.9
2,124,306	+				-1.6
2,124,306	+				+0.1
2,124,307	-				-2.0
2,124,307	-				+1.0
2,124,417	-		LU632_RS11095	0.51	-3.8
2,124,417	-		LU632_RS11095	0.51	-1.0
2,124,503	+				-0.3
2,124,539	+				-2.3
2,124,540	-				+0.0
2,124,900	+		LU632_RS11100	0.39	-0.5
2,125,444	+				-1.0
2,125,487	-				-0.2
2,125,497	+				+1.5