Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10595

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
2,024,807	+				-0.1
2,024,807	+				+0.6
2,024,872	+		LU632_RS10595	0.47	-1.9
2,024,893	+		LU632_RS10595	0.63	-0.4
2,024,937	-				-0.3
2,025,063	+				+1.1
2,025,176	+		LU632_RS10600	0.48	+1.3
2,025,176	+		LU632_RS10600	0.48	+0.2
2,025,177	-		LU632_RS10600	0.49	+1.0
2,025,177	-		LU632_RS10600	0.49	+1.1
2,025,256	+		LU632_RS10600	0.84	+0.4
2,025,335	+				+0.2
2,025,336	-				+0.8
2,025,420	+				-1.1
2,025,461	+				+0.6
2,025,461	+				+1.7
2,025,462	-				-1.9
2,025,462	-				-2.0
2,025,462	-				-1.5
2,025,473	-				+0.2
2,025,550	+				+0.7
2,025,582	+				+1.3
2,025,582	+				-1.4
2,025,582	+				-2.0
2,025,582	+				-0.1
2,025,618	-				-2.5
2,025,618	-				-0.0
2,025,625	+				-0.9
2,025,625	+				+3.1
2,025,679	+				-2.1
2,025,704	-		LU632_RS10605	0.12	-1.2
2,025,704	-		LU632_RS10605	0.12	-1.4
2,025,754	+		LU632_RS10605	0.26	+3.7
2,025,755	-		LU632_RS10605	0.26	-3.9
2,025,761	-		LU632_RS10605	0.28	-1.6
2,025,764	-		LU632_RS10605	0.28	+1.8
2,025,764	-		LU632_RS10605	0.28	+0.8