Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10110

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
1,932,070	-				+0.5
1,932,213	+				-0.5
1,932,213	+				+0.1
1,932,213	+				-3.7
1,932,275	-	yccA	LU632_RS10105	0.17	-1.1
1,932,275	-	yccA	LU632_RS10105	0.17	+0.8
1,932,277	+	yccA	LU632_RS10105	0.18	+0.9
1,932,322	+	yccA	LU632_RS10105	0.25	+3.3
1,932,342	-	yccA	LU632_RS10105	0.28	-0.5
1,932,359	-	yccA	LU632_RS10105	0.30	-4.3
1,932,363	-	yccA	LU632_RS10105	0.31	-0.7
1,932,430	+	yccA	LU632_RS10105	0.41	+3.4
1,932,437	-	yccA	LU632_RS10105	0.42	-0.5
1,932,449	+	yccA	LU632_RS10105	0.44	+0.0
1,932,449	+	yccA	LU632_RS10105	0.44	+1.1
1,932,449	+	yccA	LU632_RS10105	0.44	+0.5
1,932,453	+	yccA	LU632_RS10105	0.44	-2.4
1,932,453	+	yccA	LU632_RS10105	0.44	-0.7
1,932,453	+	yccA	LU632_RS10105	0.44	-2.8
1,932,454	-	yccA	LU632_RS10105	0.45	+0.5
1,932,536	-	yccA	LU632_RS10105	0.57	-1.1
1,932,659	-	yccA	LU632_RS10105	0.76	+1.7
1,932,659	-	yccA	LU632_RS10105	0.76	-0.0
1,932,748	-	yccA	LU632_RS10105	0.89	-0.7
1,932,751	+	yccA	LU632_RS10105	0.90	-0.9
1,932,752	-				+1.3
1,932,809	-				-1.3
1,932,817	+				-0.9
1,932,823	+				+0.1
1,932,857	-				-1.0
1,932,996	+				+0.3
1,933,018	-				-2.0
1,933,018	-				+0.4
1,933,018	-				-0.2
1,933,018	-				-0.5
1,933,019	+				+0.7
1,933,143	+				+0.7
1,933,144	-				+0.1
1,933,177	+				-0.2
1,933,319	+				+2.1
1,933,415	-				-3.8
1,933,462	-				+0.5
1,933,594	-				-0.3
1,933,594	-				+1.9
1,933,609	-				+2.5
1,933,670	+				+0.3
1,933,670	+				+2.9
1,933,724	-				-1.2
1,933,725	+				+0.1
1,933,741	-				+0.4
1,933,813	+				-1.8
1,933,813	+				+1.6
1,933,814	-				+0.9
1,933,814	-				+1.8
1,933,823	-				+1.3
1,933,848	+				+2.5
1,933,848	+				-1.0
1,933,849	-				+0.3
1,933,850	+				-2.6
1,933,850	+				+0.1
1,933,851	-				+0.5
1,933,851	-				-1.5
1,933,851	-				+0.2
1,933,873	+				+1.4
1,933,876	-				+1.7
1,933,967	-				+1.9
1,934,075	+				+1.4
1,934,075	+				-0.2