Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08785

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
1,651,509	-	wzc	LU632_RS08780	0.64	-1.8
1,651,540	+	wzc	LU632_RS08780	0.66	+0.5
1,651,691	-	wzc	LU632_RS08780	0.73	+2.1
1,651,700	-	wzc	LU632_RS08780	0.73	+0.5
1,651,711	+	wzc	LU632_RS08780	0.73	+0.2
1,651,745	-	wzc	LU632_RS08780	0.75	-2.1
1,651,798	-	wzc	LU632_RS08780	0.77	-1.5
1,651,840	-	wzc	LU632_RS08780	0.79	-0.9
1,651,850	-	wzc	LU632_RS08780	0.80	-0.9
1,651,850	-	wzc	LU632_RS08780	0.80	-0.5
1,651,894	-	wzc	LU632_RS08780	0.82	-2.6
1,651,894	-	wzc	LU632_RS08780	0.82	-1.3
1,651,894	-	wzc	LU632_RS08780	0.82	-1.7
1,651,903	+	wzc	LU632_RS08780	0.82	-1.8
1,652,001	+	wzc	LU632_RS08780	0.87	-3.4
1,652,002	-	wzc	LU632_RS08780	0.87	-2.3
1,652,002	-	wzc	LU632_RS08780	0.87	-2.5
1,652,018	-	wzc	LU632_RS08780	0.88	-1.9
1,652,024	+	wzc	LU632_RS08780	0.88	-2.1
1,652,034	+	wzc	LU632_RS08780	0.88	-2.9
1,652,240	+				-1.8
1,652,241	-				-1.3
1,652,262	-				-1.0
1,652,288	+				+1.1
1,652,403	+				-1.7
1,652,431	+				-0.9
1,652,432	-				-1.8
1,652,518	-		LU632_RS08785	0.14	-1.5
1,652,632	-		LU632_RS08785	0.26	-1.2
1,652,660	-		LU632_RS08785	0.29	-3.1
1,652,728	-		LU632_RS08785	0.37	-2.8
1,652,768	-		LU632_RS08785	0.41	-3.1
1,652,782	-		LU632_RS08785	0.43	-2.7
1,652,784	+		LU632_RS08785	0.43	-2.3
1,652,855	-		LU632_RS08785	0.51	+0.5
1,652,897	+		LU632_RS08785	0.55	-1.6
1,653,028	+		LU632_RS08785	0.70	-3.5
1,653,028	+		LU632_RS08785	0.70	-1.8
1,653,037	-		LU632_RS08785	0.71	-0.7
1,653,103	-		LU632_RS08785	0.78	-1.6
1,653,136	-		LU632_RS08785	0.82	-0.7
1,653,140	-		LU632_RS08785	0.82	-3.3
1,653,140	-		LU632_RS08785	0.82	-2.6
1,653,209	+		LU632_RS08785	0.90	-4.0
1,653,353	+				-1.7
1,653,354	-				-2.7
1,653,439	+				-1.3
1,653,474	+		LU632_RS08790	0.12	-2.1
1,653,616	-		LU632_RS08790	0.24	-2.8
1,653,616	-		LU632_RS08790	0.24	-0.2
1,653,620	-		LU632_RS08790	0.24	-0.9
1,653,650	-		LU632_RS08790	0.27	+0.0
1,653,714	+		LU632_RS08790	0.33	-1.3
1,653,736	-		LU632_RS08790	0.35	-2.8
1,653,779	-		LU632_RS08790	0.39	-2.1
1,653,962	+		LU632_RS08790	0.55	-1.5
1,654,144	+		LU632_RS08790	0.71	-0.5
1,654,184	-		LU632_RS08790	0.74	-0.9