Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08330

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
1,565,756	-				+0.8
1,565,761	+				-3.4
1,566,737	+				+0.3
1,566,738	-				-2.0
1,566,761	+				+1.0
1,566,845	+				+2.0
1,566,845	+				-0.5
1,566,847	+				-1.3
1,566,847	+				-0.5
1,566,847	+				-0.8
1,566,848	-				+1.5
1,567,058	-	bamC	LU632_RS08330	0.29	-1.8
1,567,058	-	bamC	LU632_RS08330	0.29	+2.6
1,567,139	+	bamC	LU632_RS08330	0.37	-2.1
1,567,139	+	bamC	LU632_RS08330	0.37	+0.5
1,567,141	+	bamC	LU632_RS08330	0.37	+0.5
1,567,141	+	bamC	LU632_RS08330	0.37	+2.1
1,567,141	+	bamC	LU632_RS08330	0.37	-0.5
1,567,263	-	bamC	LU632_RS08330	0.49	+0.3
1,567,297	-	bamC	LU632_RS08330	0.52	+0.5
1,567,384	+	bamC	LU632_RS08330	0.61	-0.5
1,567,385	-	bamC	LU632_RS08330	0.61	-3.4
1,567,474	+	bamC	LU632_RS08330	0.69	-1.9
1,567,544	-	bamC	LU632_RS08330	0.76	+0.1
1,567,592	+	bamC	LU632_RS08330	0.81	-0.0
1,567,592	+	bamC	LU632_RS08330	0.81	+0.5
1,567,593	-	bamC	LU632_RS08330	0.81	-0.1
1,567,595	-	bamC	LU632_RS08330	0.81	+1.7
1,567,595	-	bamC	LU632_RS08330	0.81	-1.0
1,567,726	+				+3.2
1,567,726	+				-2.5
1,567,727	-				+1.7
1,567,956	+				-1.8
1,568,027	+				+2.0
1,568,027	+				+1.2
1,568,028	-				+0.5
1,568,053	-				-0.4
1,568,077	+				+0.4
1,568,187	-				-2.6
1,568,192	-				-2.9
1,568,192	-				-2.6
1,568,509	+		LU632_RS08335	0.38	-1.0
1,568,631	-		LU632_RS08335	0.55	-3.0
1,568,640	+		LU632_RS08335	0.57	-0.5
1,568,685	-		LU632_RS08335	0.63	-2.6