Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS07405

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
1,395,644	+				+6.9
1,395,644	+				+1.3
1,395,645	-				-0.1
1,395,694	+				+0.3
1,395,694	+				-0.0
1,395,725	-				-2.4
1,395,746	+		LU632_RS07400	0.11	-1.4
1,395,901	+		LU632_RS07400	0.37	-0.4
1,395,901	+		LU632_RS07400	0.37	-0.4
1,395,901	+		LU632_RS07400	0.37	+0.6
1,395,902	-		LU632_RS07400	0.38	-0.4
1,395,931	+		LU632_RS07400	0.42	-1.6
1,396,021	-		LU632_RS07400	0.58	-0.5
1,396,084	+		LU632_RS07400	0.68	-2.4
1,396,085	-		LU632_RS07400	0.69	-1.5
1,396,193	-		LU632_RS07400	0.87	+0.8
1,396,197	+		LU632_RS07400	0.87	-1.0
1,396,197	+		LU632_RS07400	0.87	+1.8
1,396,197	+		LU632_RS07400	0.87	+1.1
1,396,197	+		LU632_RS07400	0.87	-0.4
1,396,197	+		LU632_RS07400	0.87	+2.0
1,396,197	+		LU632_RS07400	0.87	-2.2
1,396,197	+		LU632_RS07400	0.87	-0.1
1,396,198	-		LU632_RS07400	0.88	-0.9
1,396,198	-		LU632_RS07400	0.88	-0.8
1,396,198	-		LU632_RS07400	0.88	+1.4
1,396,198	-		LU632_RS07400	0.88	+0.1
1,396,422	+				-1.6
1,396,422	+				+1.4
1,396,422	+				+0.1
1,396,423	-				+0.7
1,396,423	-				-0.1
1,396,452	-				+3.1
1,396,452	-				+1.8
1,396,452	-				+0.3
1,397,761	+				-0.0
1,397,761	+				-0.2
1,397,761	+				-0.3
1,397,761	+				+1.4
1,397,761	+				+0.9
1,397,766	-				+3.6
1,397,897	-				-1.4
1,397,910	+				+1.0
1,397,911	-				+1.1
1,397,934	+				+1.2