Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06555

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
1,260,583	-		LU632_RS06550	0.84	-2.5
1,260,594	+		LU632_RS06550	0.87	+2.6
1,260,594	+		LU632_RS06550	0.87	+1.0
1,260,595	-		LU632_RS06550	0.87	+0.7
1,260,595	-		LU632_RS06550	0.87	-0.3
1,260,595	-		LU632_RS06550	0.87	-2.0
1,260,606	+				-0.1
1,260,606	+				+1.1
1,260,678	-				+1.1
1,260,699	-				-1.3
1,260,718	+				-0.2
1,260,719	-				+3.0
1,260,719	-				-1.2
1,260,899	+				+1.0
1,260,900	-				-1.4
1,261,030	+				-3.0
1,261,033	-				-0.6
1,261,033	-				-0.6
1,261,065	+				+0.4
1,261,075	-				-1.4
1,261,079	-				-1.3
1,261,095	-				+1.1
1,261,229	+				-0.1
1,261,230	-				+0.5
1,261,286	+				-0.3
1,261,342	+				+0.5
1,261,343	-				+0.1
1,261,376	-				-1.1
1,261,377	+				-0.4
1,261,377	+				+1.1
1,261,377	+				+0.5
1,261,378	-				-0.6
1,261,425	+				-0.3
1,262,334	-		LU632_RS06555	0.76	+1.4
1,262,894	-				+0.8