Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04710

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
923,083	+				-0.3
923,084	-				+2.9
923,085	+				-0.5
923,086	-				+1.0
923,087	+				-0.4
923,088	-				-2.2
923,088	-				-1.3
923,088	-				-1.5
923,088	-				-0.2
923,088	-				+0.6
923,117	-				-2.2
923,907	-		LU632_RS04710	0.55	+1.6
924,491	-				+0.2
924,491	-				+0.7
924,491	-				+0.2
924,516	-				+0.3
924,516	-				+5.1
924,568	+				-0.0
924,569	-				-1.1
924,590	+				+5.0
924,591	-				-0.9
924,591	-				+1.8
924,597	+				-0.4
924,598	-				+2.6
924,599	+				+0.8
924,600	-				+0.3
924,601	+				-0.3
924,602	-				-3.3
924,629	+				+0.8
924,630	-				+1.3
924,665	+				+0.0
924,666	-				-1.0
924,666	-				+0.7
924,672	+				-3.0
924,673	-				-0.3
924,674	+				+1.4
924,674	+				+0.6
924,675	-				-2.0
924,675	-				-0.0
924,689	+				+4.0
924,708	+				-1.4
924,728	+				+0.3
924,752	-				+0.6
924,854	-		LU632_RS04715	0.19	+0.2
924,854	-		LU632_RS04715	0.19	-1.3
924,958	+		LU632_RS04715	0.32	-1.4
924,959	-		LU632_RS04715	0.32	+0.9
924,963	-		LU632_RS04715	0.33	+1.1
925,119	+		LU632_RS04715	0.53	+0.3
925,119	-		LU632_RS04715	0.53	-0.2
925,120	-		LU632_RS04715	0.53	+1.1
925,142	-		LU632_RS04715	0.56	-0.3
925,338	-		LU632_RS04715	0.82	+2.2