Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04655

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
909,860	+				+1.0
909,926	+				+3.8
909,927	-				+0.9
909,950	+				-2.0
909,969	+				+0.7
909,969	+				-3.3
909,973	+				-0.9
909,974	-				-1.5
909,993	+				-3.6
909,993	+				-0.4
910,073	-				+0.9
910,093	+				-2.6
910,093	+				-0.5
910,094	-				-0.6
910,171	+				+0.7
910,172	-				-0.3
910,272	-		LU632_RS04650	0.15	-0.1
910,423	+		LU632_RS04650	0.47	-0.6
910,473	-		LU632_RS04650	0.58	-1.0
910,482	-		LU632_RS04650	0.60	-0.4
910,670	+				-0.4
910,671	-				+1.4
910,680	+				-0.0
910,716	-				-1.1
911,509	+				+1.0
911,572	+				+0.6
911,572	+				-0.8
911,572	+				+0.9
911,572	+				+0.7
911,573	-				-1.1
911,573	-				-0.4
911,573	-				+1.2
911,676	+				-1.0
911,676	+				-2.4
911,676	+				-1.4
911,698	-				+1.6
911,698	-				-1.3