Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_04431 and OHPLBJKB_04432 are separated by 385 nucleotides OHPLBJKB_04432 and OHPLBJKB_04433 overlap by 19 nucleotides
OHPLBJKB_04431: OHPLBJKB_04431 - DNA adenine methyltransferase YhdJ, at 79,258 to 79,941
_04431
OHPLBJKB_04432: OHPLBJKB_04432 - hypothetical protein, at 80,327 to 80,764
_04432
OHPLBJKB_04433: OHPLBJKB_04433 - hypothetical protein, at 80,746 to 81,252
_04433
Position (kb)
80
81 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 79.379 kb on + strand, within OHPLBJKB_04431 at 79.380 kb on - strand, within OHPLBJKB_04431 at 79.595 kb on + strand, within OHPLBJKB_04431 at 79.595 kb on + strand, within OHPLBJKB_04431 at 79.595 kb on + strand, within OHPLBJKB_04431 at 79.595 kb on + strand, within OHPLBJKB_04431 at 79.595 kb on + strand, within OHPLBJKB_04431 at 79.596 kb on - strand, within OHPLBJKB_04431 at 79.596 kb on - strand, within OHPLBJKB_04431 at 79.596 kb on - strand, within OHPLBJKB_04431 at 79.596 kb on - strand, within OHPLBJKB_04431 at 79.622 kb on + strand, within OHPLBJKB_04431 at 79.622 kb on + strand, within OHPLBJKB_04431 at 79.622 kb on + strand, within OHPLBJKB_04431 at 79.622 kb on + strand, within OHPLBJKB_04431 at 79.622 kb on + strand, within OHPLBJKB_04431 at 79.622 kb on + strand, within OHPLBJKB_04431 at 79.640 kb on + strand, within OHPLBJKB_04431 at 79.640 kb on + strand, within OHPLBJKB_04431 at 79.640 kb on + strand, within OHPLBJKB_04431 at 79.651 kb on - strand, within OHPLBJKB_04431 at 79.728 kb on - strand, within OHPLBJKB_04431 at 79.767 kb on - strand, within OHPLBJKB_04431 at 79.767 kb on - strand, within OHPLBJKB_04431 at 79.776 kb on + strand, within OHPLBJKB_04431 at 79.822 kb on - strand, within OHPLBJKB_04431 at 79.854 kb on - strand, within OHPLBJKB_04431 at 79.929 kb on + strand at 79.941 kb on + strand at 79.941 kb on + strand at 79.941 kb on + strand at 79.942 kb on - strand at 80.142 kb on + strand at 80.256 kb on - strand at 80.323 kb on + strand at 80.323 kb on + strand at 80.323 kb on + strand at 80.323 kb on + strand at 80.324 kb on - strand at 80.324 kb on - strand at 80.457 kb on + strand, within OHPLBJKB_04432 at 80.458 kb on - strand, within OHPLBJKB_04432 at 80.531 kb on + strand, within OHPLBJKB_04432 at 80.531 kb on + strand, within OHPLBJKB_04432 at 80.532 kb on - strand, within OHPLBJKB_04432 at 80.534 kb on + strand, within OHPLBJKB_04432 at 80.534 kb on + strand, within OHPLBJKB_04432 at 80.625 kb on + strand, within OHPLBJKB_04432 at 80.650 kb on - strand, within OHPLBJKB_04432 at 80.659 kb on + strand, within OHPLBJKB_04432 at 80.812 kb on + strand, within OHPLBJKB_04433 at 80.812 kb on + strand, within OHPLBJKB_04433 at 80.813 kb on - strand, within OHPLBJKB_04433 at 80.978 kb on - strand, within OHPLBJKB_04433 at 80.978 kb on - strand, within OHPLBJKB_04433 at 80.978 kb on - strand, within OHPLBJKB_04433 at 80.978 kb on - strand, within OHPLBJKB_04433 at 81.133 kb on - strand, within OHPLBJKB_04433 at 81.224 kb on + strand at 81.224 kb on + strand at 81.228 kb on + strand at 81.228 kb on + strand at 81.317 kb on + strand at 81.458 kb on + strand at 81.471 kb on + strand at 81.471 kb on + strand at 81.471 kb on + strand at 81.496 kb on - strand at 81.528 kb on + strand at 81.528 kb on + strand at 81.529 kb on - strand at 81.529 kb on - strand at 81.529 kb on - strand at 81.529 kb on - strand at 81.529 kb on - strand at 81.580 kb on + strand at 81.581 kb on - strand at 81.612 kb on - strand at 81.626 kb on - strand at 81.626 kb on - strand at 81.640 kb on + strand at 81.640 kb on + strand at 81.640 kb on + strand at 81.641 kb on - strand at 81.641 kb on - strand at 81.641 kb on - strand at 81.641 kb on - strand at 81.641 kb on - strand at 81.641 kb on - strand at 81.709 kb on - strand at 81.709 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 79,379 + OHPLBJKB_04431 0.18 +0.7 79,380 - OHPLBJKB_04431 0.18 +1.9 79,595 + OHPLBJKB_04431 0.49 -1.1 79,595 + OHPLBJKB_04431 0.49 -1.1 79,595 + OHPLBJKB_04431 0.49 +0.2 79,595 + OHPLBJKB_04431 0.49 +1.3 79,595 + OHPLBJKB_04431 0.49 -1.1 79,596 - OHPLBJKB_04431 0.49 +0.9 79,596 - OHPLBJKB_04431 0.49 +2.5 79,596 - OHPLBJKB_04431 0.49 +1.6 79,596 - OHPLBJKB_04431 0.49 -0.6 79,622 + OHPLBJKB_04431 0.53 -0.1 79,622 + OHPLBJKB_04431 0.53 -0.1 79,622 + OHPLBJKB_04431 0.53 -1.1 79,622 + OHPLBJKB_04431 0.53 +0.9 79,622 + OHPLBJKB_04431 0.53 -1.1 79,622 + OHPLBJKB_04431 0.53 +1.9 79,640 + OHPLBJKB_04431 0.56 +0.9 79,640 + OHPLBJKB_04431 0.56 -0.4 79,640 + OHPLBJKB_04431 0.56 +0.3 79,651 - OHPLBJKB_04431 0.57 -0.1 79,728 - OHPLBJKB_04431 0.69 -0.1 79,767 - OHPLBJKB_04431 0.74 -0.2 79,767 - OHPLBJKB_04431 0.74 +0.9 79,776 + OHPLBJKB_04431 0.76 -0.1 79,822 - OHPLBJKB_04431 0.82 -1.1 79,854 - OHPLBJKB_04431 0.87 +1.9 79,929 + -0.7 79,941 + +0.9 79,941 + +1.9 79,941 + -0.7 79,942 - +1.9 80,142 + +0.9 80,256 - -0.1 80,323 + +0.3 80,323 + -0.7 80,323 + +0.6 80,323 + +1.3 80,324 - -1.3 80,324 - -0.7 80,457 + OHPLBJKB_04432 0.30 -0.1 80,458 - OHPLBJKB_04432 0.30 -0.5 80,531 + OHPLBJKB_04432 0.47 -2.8 80,531 + OHPLBJKB_04432 0.47 -0.1 80,532 - OHPLBJKB_04432 0.47 +1.6 80,534 + OHPLBJKB_04432 0.47 -0.1 80,534 + OHPLBJKB_04432 0.47 -0.1 80,625 + OHPLBJKB_04432 0.68 -1.3 80,650 - OHPLBJKB_04432 0.74 +0.9 80,659 + OHPLBJKB_04432 0.76 +1.9 80,812 + OHPLBJKB_04433 0.13 +0.3 80,812 + OHPLBJKB_04433 0.13 +0.3 80,813 - OHPLBJKB_04433 0.13 -0.7 80,978 - OHPLBJKB_04433 0.46 -0.1 80,978 - OHPLBJKB_04433 0.46 +0.9 80,978 - OHPLBJKB_04433 0.46 -1.4 80,978 - OHPLBJKB_04433 0.46 +0.9 81,133 - OHPLBJKB_04433 0.76 +0.9 81,224 + -0.7 81,224 + +0.2 81,228 + -0.1 81,228 + +0.1 81,317 + -0.1 81,458 + -0.1 81,471 + +0.9 81,471 + -1.1 81,471 + +1.5 81,496 - -0.4 81,528 + -0.9 81,528 + +1.9 81,529 - +0.3 81,529 - -1.4 81,529 - -0.4 81,529 - -1.1 81,529 - -1.1 81,580 + -1.4 81,581 - -0.7 81,612 - -1.1 81,626 - +0.3 81,626 - +1.9 81,640 + -0.1 81,640 + -0.7 81,640 + +0.3 81,641 - +0.9 81,641 - +0.9 81,641 - +0.2 81,641 - +0.1 81,641 - -0.7 81,641 - +0.9 81,709 - -1.1 81,709 - -1.1
Or see this region's nucleotide sequence