Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_03776 and OHPLBJKB_03777 are separated by 94 nucleotides OHPLBJKB_03777 and OHPLBJKB_03778 overlap by 1 nucleotides
OHPLBJKB_03776: OHPLBJKB_03776 - Cytosol aminopeptidase, at 3,963,890 to 3,965,401
_03776
OHPLBJKB_03777: OHPLBJKB_03777 - DNA polymerase III subunit chi, at 3,965,496 to 3,965,978
_03777
OHPLBJKB_03778: OHPLBJKB_03778 - Valine--tRNA ligase, at 3,965,978 to 3,968,833
_03778
Position (kb)
3965
3966 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3964.529 kb on + strand, within OHPLBJKB_03776 at 3964.529 kb on + strand, within OHPLBJKB_03776 at 3964.530 kb on - strand, within OHPLBJKB_03776 at 3964.530 kb on - strand, within OHPLBJKB_03776 at 3964.530 kb on - strand, within OHPLBJKB_03776 at 3964.649 kb on + strand, within OHPLBJKB_03776 at 3964.763 kb on + strand, within OHPLBJKB_03776 at 3964.763 kb on + strand, within OHPLBJKB_03776 at 3964.763 kb on + strand, within OHPLBJKB_03776 at 3964.763 kb on + strand, within OHPLBJKB_03776 at 3964.764 kb on - strand, within OHPLBJKB_03776 at 3964.768 kb on + strand, within OHPLBJKB_03776 at 3964.768 kb on + strand, within OHPLBJKB_03776 at 3964.768 kb on + strand, within OHPLBJKB_03776 at 3964.768 kb on + strand, within OHPLBJKB_03776 at 3964.768 kb on + strand, within OHPLBJKB_03776 at 3964.769 kb on - strand, within OHPLBJKB_03776 at 3964.769 kb on - strand, within OHPLBJKB_03776 at 3964.818 kb on + strand, within OHPLBJKB_03776 at 3964.818 kb on + strand, within OHPLBJKB_03776 at 3964.818 kb on + strand, within OHPLBJKB_03776 at 3964.963 kb on - strand, within OHPLBJKB_03776 at 3964.978 kb on - strand, within OHPLBJKB_03776 at 3964.978 kb on - strand, within OHPLBJKB_03776 at 3964.982 kb on + strand, within OHPLBJKB_03776 at 3964.982 kb on + strand, within OHPLBJKB_03776 at 3964.982 kb on + strand, within OHPLBJKB_03776 at 3964.983 kb on - strand, within OHPLBJKB_03776 at 3964.983 kb on - strand, within OHPLBJKB_03776 at 3964.983 kb on - strand, within OHPLBJKB_03776 at 3964.983 kb on - strand, within OHPLBJKB_03776 at 3964.983 kb on - strand, within OHPLBJKB_03776 at 3964.983 kb on - strand, within OHPLBJKB_03776 at 3964.983 kb on - strand, within OHPLBJKB_03776 at 3964.983 kb on - strand, within OHPLBJKB_03776 at 3965.165 kb on + strand, within OHPLBJKB_03776 at 3965.166 kb on - strand, within OHPLBJKB_03776 at 3965.267 kb on - strand at 3965.270 kb on + strand at 3965.270 kb on + strand at 3965.270 kb on + strand at 3965.270 kb on + strand at 3965.270 kb on + strand at 3965.270 kb on + strand at 3965.271 kb on - strand at 3965.370 kb on + strand at 3965.399 kb on + strand at 3965.400 kb on - strand at 3965.400 kb on - strand at 3965.412 kb on + strand at 3965.412 kb on + strand at 3965.413 kb on - strand at 3965.464 kb on - strand at 3965.485 kb on + strand at 3965.485 kb on + strand at 3965.485 kb on + strand at 3965.505 kb on + strand at 3965.506 kb on - strand at 3965.509 kb on + strand at 3965.510 kb on - strand at 3965.553 kb on + strand, within OHPLBJKB_03777 at 3965.553 kb on + strand, within OHPLBJKB_03777 at 3965.553 kb on + strand, within OHPLBJKB_03777 at 3965.554 kb on - strand, within OHPLBJKB_03777 at 3965.554 kb on - strand, within OHPLBJKB_03777 at 3965.587 kb on + strand, within OHPLBJKB_03777 at 3965.587 kb on + strand, within OHPLBJKB_03777 at 3965.588 kb on - strand, within OHPLBJKB_03777 at 3965.588 kb on - strand, within OHPLBJKB_03777 at 3965.683 kb on - strand, within OHPLBJKB_03777 at 3965.816 kb on + strand, within OHPLBJKB_03777 at 3965.817 kb on - strand, within OHPLBJKB_03777 at 3965.818 kb on + strand, within OHPLBJKB_03777 at 3965.819 kb on - strand, within OHPLBJKB_03777 at 3965.819 kb on - strand, within OHPLBJKB_03777 at 3965.819 kb on - strand, within OHPLBJKB_03777 at 3965.819 kb on - strand, within OHPLBJKB_03777 at 3965.819 kb on - strand, within OHPLBJKB_03777 at 3965.819 kb on - strand, within OHPLBJKB_03777 at 3965.826 kb on - strand, within OHPLBJKB_03777 at 3965.826 kb on - strand, within OHPLBJKB_03777 at 3965.875 kb on + strand, within OHPLBJKB_03777
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 3,964,529 + OHPLBJKB_03776 0.42 +0.0 3,964,529 + OHPLBJKB_03776 0.42 +1.9 3,964,530 - OHPLBJKB_03776 0.42 +0.8 3,964,530 - OHPLBJKB_03776 0.42 -0.5 3,964,530 - OHPLBJKB_03776 0.42 +0.5 3,964,649 + OHPLBJKB_03776 0.50 -0.0 3,964,763 + OHPLBJKB_03776 0.58 -1.3 3,964,763 + OHPLBJKB_03776 0.58 +0.5 3,964,763 + OHPLBJKB_03776 0.58 +0.4 3,964,763 + OHPLBJKB_03776 0.58 -1.1 3,964,764 - OHPLBJKB_03776 0.58 -1.1 3,964,768 + OHPLBJKB_03776 0.58 -0.1 3,964,768 + OHPLBJKB_03776 0.58 -0.7 3,964,768 + OHPLBJKB_03776 0.58 +0.1 3,964,768 + OHPLBJKB_03776 0.58 -0.6 3,964,768 + OHPLBJKB_03776 0.58 -0.8 3,964,769 - OHPLBJKB_03776 0.58 -0.5 3,964,769 - OHPLBJKB_03776 0.58 -1.5 3,964,818 + OHPLBJKB_03776 0.61 -1.5 3,964,818 + OHPLBJKB_03776 0.61 -0.9 3,964,818 + OHPLBJKB_03776 0.61 -1.8 3,964,963 - OHPLBJKB_03776 0.71 -0.2 3,964,978 - OHPLBJKB_03776 0.72 +1.1 3,964,978 - OHPLBJKB_03776 0.72 -0.0 3,964,982 + OHPLBJKB_03776 0.72 +0.0 3,964,982 + OHPLBJKB_03776 0.72 +0.6 3,964,982 + OHPLBJKB_03776 0.72 -0.7 3,964,983 - OHPLBJKB_03776 0.72 -0.3 3,964,983 - OHPLBJKB_03776 0.72 +0.4 3,964,983 - OHPLBJKB_03776 0.72 -0.8 3,964,983 - OHPLBJKB_03776 0.72 -0.2 3,964,983 - OHPLBJKB_03776 0.72 -0.4 3,964,983 - OHPLBJKB_03776 0.72 -1.9 3,964,983 - OHPLBJKB_03776 0.72 -0.3 3,964,983 - OHPLBJKB_03776 0.72 +0.4 3,965,165 + OHPLBJKB_03776 0.84 +0.3 3,965,166 - OHPLBJKB_03776 0.84 -0.6 3,965,267 - +0.2 3,965,270 + +0.4 3,965,270 + +0.8 3,965,270 + -0.4 3,965,270 + +0.4 3,965,270 + +0.1 3,965,270 + +1.0 3,965,271 - +1.0 3,965,370 + +0.2 3,965,399 + +0.9 3,965,400 - -1.1 3,965,400 - -1.9 3,965,412 + +1.1 3,965,412 + +1.4 3,965,413 - +0.3 3,965,464 - +0.0 3,965,485 + -0.3 3,965,485 + -0.3 3,965,485 + +1.0 3,965,505 + -0.3 3,965,506 - +0.6 3,965,509 + -0.2 3,965,510 - -0.9 3,965,553 + OHPLBJKB_03777 0.12 +0.3 3,965,553 + OHPLBJKB_03777 0.12 -1.4 3,965,553 + OHPLBJKB_03777 0.12 +1.6 3,965,554 - OHPLBJKB_03777 0.12 -0.7 3,965,554 - OHPLBJKB_03777 0.12 -1.5 3,965,587 + OHPLBJKB_03777 0.19 -1.3 3,965,587 + OHPLBJKB_03777 0.19 -0.5 3,965,588 - OHPLBJKB_03777 0.19 +0.1 3,965,588 - OHPLBJKB_03777 0.19 -0.5 3,965,683 - OHPLBJKB_03777 0.39 +1.1 3,965,816 + OHPLBJKB_03777 0.66 -0.1 3,965,817 - OHPLBJKB_03777 0.66 -0.8 3,965,818 + OHPLBJKB_03777 0.67 +1.1 3,965,819 - OHPLBJKB_03777 0.67 -1.1 3,965,819 - OHPLBJKB_03777 0.67 -0.4 3,965,819 - OHPLBJKB_03777 0.67 -0.2 3,965,819 - OHPLBJKB_03777 0.67 -1.4 3,965,819 - OHPLBJKB_03777 0.67 -0.9 3,965,819 - OHPLBJKB_03777 0.67 -3.1 3,965,826 - OHPLBJKB_03777 0.68 +0.1 3,965,826 - OHPLBJKB_03777 0.68 +0.1 3,965,875 + OHPLBJKB_03777 0.78 -0.2
Or see this region's nucleotide sequence