Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_03611 and OHPLBJKB_03612 are separated by 58 nucleotides OHPLBJKB_03612 and OHPLBJKB_03613 overlap by 4 nucleotides
OHPLBJKB_03611: OHPLBJKB_03611 - Inner membrane metabolite transport protein YgcS, at 3,792,062 to 3,793,393
_03611
OHPLBJKB_03612: OHPLBJKB_03612 - Ferredoxin-like protein FixX, at 3,793,452 to 3,793,739
_03612
OHPLBJKB_03613: OHPLBJKB_03613 - Putative thiazole biosynthetic enzyme, at 3,793,736 to 3,795,022
_03613
Position (kb)
3793
3794 Strain fitness (log2 ratio)
-2
-1
0
1 at 3792.485 kb on + strand, within OHPLBJKB_03611 at 3792.506 kb on - strand, within OHPLBJKB_03611 at 3792.606 kb on + strand, within OHPLBJKB_03611 at 3792.792 kb on - strand, within OHPLBJKB_03611 at 3792.794 kb on + strand, within OHPLBJKB_03611 at 3792.898 kb on - strand, within OHPLBJKB_03611 at 3792.939 kb on + strand, within OHPLBJKB_03611 at 3792.939 kb on + strand, within OHPLBJKB_03611 at 3792.940 kb on - strand, within OHPLBJKB_03611 at 3793.127 kb on - strand, within OHPLBJKB_03611 at 3793.168 kb on + strand, within OHPLBJKB_03611 at 3793.296 kb on - strand at 3793.296 kb on - strand at 3793.296 kb on - strand at 3793.296 kb on - strand at 3793.296 kb on - strand at 3793.299 kb on + strand at 3793.299 kb on + strand at 3793.299 kb on + strand at 3793.299 kb on + strand at 3793.299 kb on + strand at 3793.299 kb on + strand at 3793.300 kb on - strand at 3793.300 kb on - strand at 3793.300 kb on - strand at 3793.399 kb on - strand at 3793.436 kb on - strand at 3793.440 kb on - strand at 3793.440 kb on - strand at 3793.597 kb on + strand, within OHPLBJKB_03612 at 3793.598 kb on - strand, within OHPLBJKB_03612 at 3793.598 kb on - strand, within OHPLBJKB_03612 at 3793.935 kb on + strand, within OHPLBJKB_03613 at 3793.935 kb on + strand, within OHPLBJKB_03613 at 3793.936 kb on - strand, within OHPLBJKB_03613 at 3793.939 kb on + strand, within OHPLBJKB_03613 at 3793.939 kb on + strand, within OHPLBJKB_03613 at 3793.939 kb on + strand, within OHPLBJKB_03613 at 3793.939 kb on + strand, within OHPLBJKB_03613 at 3793.939 kb on + strand, within OHPLBJKB_03613 at 3793.939 kb on + strand, within OHPLBJKB_03613 at 3793.939 kb on + strand, within OHPLBJKB_03613 at 3793.939 kb on + strand, within OHPLBJKB_03613 at 3793.939 kb on + strand, within OHPLBJKB_03613 at 3793.939 kb on + strand, within OHPLBJKB_03613 at 3793.939 kb on + strand, within OHPLBJKB_03613 at 3793.939 kb on + strand, within OHPLBJKB_03613 at 3793.940 kb on - strand, within OHPLBJKB_03613 at 3793.940 kb on - strand, within OHPLBJKB_03613 at 3793.940 kb on - strand, within OHPLBJKB_03613 at 3793.940 kb on - strand, within OHPLBJKB_03613 at 3793.940 kb on - strand, within OHPLBJKB_03613 at 3793.940 kb on - strand, within OHPLBJKB_03613 at 3793.940 kb on - strand, within OHPLBJKB_03613 at 3793.940 kb on - strand, within OHPLBJKB_03613 at 3793.940 kb on - strand, within OHPLBJKB_03613 at 3793.940 kb on - strand, within OHPLBJKB_03613 at 3793.940 kb on - strand, within OHPLBJKB_03613 at 3793.940 kb on - strand, within OHPLBJKB_03613 at 3794.087 kb on - strand, within OHPLBJKB_03613 at 3794.101 kb on + strand, within OHPLBJKB_03613 at 3794.102 kb on - strand, within OHPLBJKB_03613 at 3794.102 kb on - strand, within OHPLBJKB_03613 at 3794.183 kb on + strand, within OHPLBJKB_03613 at 3794.184 kb on - strand, within OHPLBJKB_03613 at 3794.197 kb on - strand, within OHPLBJKB_03613 at 3794.197 kb on - strand, within OHPLBJKB_03613 at 3794.342 kb on - strand, within OHPLBJKB_03613 at 3794.343 kb on + strand, within OHPLBJKB_03613 at 3794.344 kb on - strand, within OHPLBJKB_03613 at 3794.410 kb on + strand, within OHPLBJKB_03613 at 3794.591 kb on + strand, within OHPLBJKB_03613 at 3794.592 kb on - strand, within OHPLBJKB_03613 at 3794.618 kb on + strand, within OHPLBJKB_03613 at 3794.618 kb on + strand, within OHPLBJKB_03613 at 3794.648 kb on + strand, within OHPLBJKB_03613 at 3794.648 kb on + strand, within OHPLBJKB_03613 at 3794.649 kb on - strand, within OHPLBJKB_03613
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 3,792,485 + OHPLBJKB_03611 0.32 +0.5 3,792,506 - OHPLBJKB_03611 0.33 +0.3 3,792,606 + OHPLBJKB_03611 0.41 +0.3 3,792,792 - OHPLBJKB_03611 0.55 -1.5 3,792,794 + OHPLBJKB_03611 0.55 +0.4 3,792,898 - OHPLBJKB_03611 0.63 -1.7 3,792,939 + OHPLBJKB_03611 0.66 -0.5 3,792,939 + OHPLBJKB_03611 0.66 -0.7 3,792,940 - OHPLBJKB_03611 0.66 +1.6 3,793,127 - OHPLBJKB_03611 0.80 -0.1 3,793,168 + OHPLBJKB_03611 0.83 -0.7 3,793,296 - -0.7 3,793,296 - -0.3 3,793,296 - -0.2 3,793,296 - -0.5 3,793,296 - -1.1 3,793,299 + -0.6 3,793,299 + -0.5 3,793,299 + +0.2 3,793,299 + +0.8 3,793,299 + -0.1 3,793,299 + -0.1 3,793,300 - -0.1 3,793,300 - -0.1 3,793,300 - -1.1 3,793,399 - -0.0 3,793,436 - +0.3 3,793,440 - +1.1 3,793,440 - +0.4 3,793,597 + OHPLBJKB_03612 0.50 -0.5 3,793,598 - OHPLBJKB_03612 0.51 -1.1 3,793,598 - OHPLBJKB_03612 0.51 -0.3 3,793,935 + OHPLBJKB_03613 0.15 +0.1 3,793,935 + OHPLBJKB_03613 0.15 -0.2 3,793,936 - OHPLBJKB_03613 0.16 +0.4 3,793,939 + OHPLBJKB_03613 0.16 +0.6 3,793,939 + OHPLBJKB_03613 0.16 -0.1 3,793,939 + OHPLBJKB_03613 0.16 -0.5 3,793,939 + OHPLBJKB_03613 0.16 +0.1 3,793,939 + OHPLBJKB_03613 0.16 +1.3 3,793,939 + OHPLBJKB_03613 0.16 -0.2 3,793,939 + OHPLBJKB_03613 0.16 +0.1 3,793,939 + OHPLBJKB_03613 0.16 -0.1 3,793,939 + OHPLBJKB_03613 0.16 -0.3 3,793,939 + OHPLBJKB_03613 0.16 -0.2 3,793,939 + OHPLBJKB_03613 0.16 -0.3 3,793,939 + OHPLBJKB_03613 0.16 -0.7 3,793,940 - OHPLBJKB_03613 0.16 +0.2 3,793,940 - OHPLBJKB_03613 0.16 -0.1 3,793,940 - OHPLBJKB_03613 0.16 +0.1 3,793,940 - OHPLBJKB_03613 0.16 +0.4 3,793,940 - OHPLBJKB_03613 0.16 +0.6 3,793,940 - OHPLBJKB_03613 0.16 +0.0 3,793,940 - OHPLBJKB_03613 0.16 -0.7 3,793,940 - OHPLBJKB_03613 0.16 -1.2 3,793,940 - OHPLBJKB_03613 0.16 -0.4 3,793,940 - OHPLBJKB_03613 0.16 +0.2 3,793,940 - OHPLBJKB_03613 0.16 +1.3 3,793,940 - OHPLBJKB_03613 0.16 +0.8 3,794,087 - OHPLBJKB_03613 0.27 -0.2 3,794,101 + OHPLBJKB_03613 0.28 -0.1 3,794,102 - OHPLBJKB_03613 0.28 +0.3 3,794,102 - OHPLBJKB_03613 0.28 +1.3 3,794,183 + OHPLBJKB_03613 0.35 +0.2 3,794,184 - OHPLBJKB_03613 0.35 +0.2 3,794,197 - OHPLBJKB_03613 0.36 +0.1 3,794,197 - OHPLBJKB_03613 0.36 -1.9 3,794,342 - OHPLBJKB_03613 0.47 -0.9 3,794,343 + OHPLBJKB_03613 0.47 -1.0 3,794,344 - OHPLBJKB_03613 0.47 +1.2 3,794,410 + OHPLBJKB_03613 0.52 -0.1 3,794,591 + OHPLBJKB_03613 0.66 +0.3 3,794,592 - OHPLBJKB_03613 0.67 +0.3 3,794,618 + OHPLBJKB_03613 0.69 +0.2 3,794,618 + OHPLBJKB_03613 0.69 -0.5 3,794,648 + OHPLBJKB_03613 0.71 +0.3 3,794,648 + OHPLBJKB_03613 0.71 -1.0 3,794,649 - OHPLBJKB_03613 0.71 -0.4
Or see this region's nucleotide sequence