Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03497

Experiment: Control_HSF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_03496 and OHPLBJKB_03497 are separated by 61 nucleotidesOHPLBJKB_03497 and OHPLBJKB_03498 are separated by 30 nucleotides OHPLBJKB_03496: OHPLBJKB_03496 - Methionine aminopeptidase, at 3,654,798 to 3,655,592 _03496 OHPLBJKB_03497: OHPLBJKB_03497 - Bifunctional uridylyltransferase/uridylyl-removing enzyme, at 3,655,654 to 3,658,326 _03497 OHPLBJKB_03498: OHPLBJKB_03498 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 3,658,357 to 3,659,181 _03498 Position (kb) 3655 3656 3657 3658 3659Strain fitness (log2 ratio) -3 -2 -1 0 1at 3654.671 kb on - strandat 3654.673 kb on + strandat 3654.675 kb on + strandat 3654.675 kb on + strandat 3654.676 kb on - strandat 3654.676 kb on - strandat 3654.676 kb on - strandat 3654.676 kb on - strandat 3654.676 kb on - strandat 3654.754 kb on + strandat 3654.754 kb on + strandat 3654.754 kb on + strandat 3654.754 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.758 kb on + strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.759 kb on - strandat 3654.760 kb on + strandat 3654.760 kb on + strandat 3654.760 kb on + strandat 3654.762 kb on + strandat 3655.591 kb on - strandat 3655.628 kb on + strandat 3655.633 kb on + strandat 3656.756 kb on + strand, within OHPLBJKB_03497at 3656.756 kb on + strand, within OHPLBJKB_03497at 3656.756 kb on + strand, within OHPLBJKB_03497at 3656.756 kb on + strand, within OHPLBJKB_03497at 3656.795 kb on - strand, within OHPLBJKB_03497at 3658.339 kb on + strandat 3659.180 kb on - strandat 3659.185 kb on + strandat 3659.185 kb on + strandat 3659.185 kb on + strandat 3659.185 kb on + strandat 3659.186 kb on - strandat 3659.186 kb on - strandat 3659.189 kb on + strandat 3659.189 kb on + strandat 3659.189 kb on + strandat 3659.189 kb on + strandat 3659.189 kb on + strandat 3659.189 kb on + strandat 3659.189 kb on + strandat 3659.189 kb on + strandat 3659.190 kb on - strandat 3659.190 kb on - strandat 3659.190 kb on - strandat 3659.190 kb on - strandat 3659.190 kb on - strandat 3659.190 kb on - strandat 3659.191 kb on + strandat 3659.191 kb on + strandat 3659.192 kb on - strandat 3659.234 kb on - strandat 3659.269 kb on - strandat 3659.302 kb on + strandat 3659.303 kb on - strandat 3659.303 kb on - strandat 3659.321 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_HSF
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3,654,671 - +0.5
3,654,673 + +0.3
3,654,675 + -0.7
3,654,675 + -0.3
3,654,676 - -0.6
3,654,676 - -1.0
3,654,676 - +0.2
3,654,676 - -0.0
3,654,676 - +0.5
3,654,754 + +0.3
3,654,754 + +1.3
3,654,754 + +1.3
3,654,754 + +0.3
3,654,758 + -0.6
3,654,758 + +0.4
3,654,758 + +1.3
3,654,758 + -1.9
3,654,758 + -0.7
3,654,758 + -1.1
3,654,758 + -0.8
3,654,758 + -2.8
3,654,758 + -0.1
3,654,758 + -0.7
3,654,758 + -1.0
3,654,758 + -0.2
3,654,758 + -0.9
3,654,758 + -0.0
3,654,758 + +0.6
3,654,758 + -2.6
3,654,758 + -0.6
3,654,758 + +0.6
3,654,758 + -0.3
3,654,758 + +1.4
3,654,758 + -0.8
3,654,758 + -0.5
3,654,758 + +0.7
3,654,759 - -0.1
3,654,759 - +0.2
3,654,759 - +0.5
3,654,759 - -0.0
3,654,759 - +0.3
3,654,759 - -0.3
3,654,759 - -0.7
3,654,759 - -1.0
3,654,759 - -0.2
3,654,759 - +0.6
3,654,759 - +0.3
3,654,759 - -0.2
3,654,759 - +0.3
3,654,759 - -0.7
3,654,759 - +0.0
3,654,759 - +0.2
3,654,759 - -0.2
3,654,759 - -1.4
3,654,759 - -0.2
3,654,760 + +0.3
3,654,760 + -1.0
3,654,760 + -1.5
3,654,762 + +0.3
3,655,591 - +1.3
3,655,628 + +0.0
3,655,633 + -0.1
3,656,756 + OHPLBJKB_03497 0.41 -1.3
3,656,756 + OHPLBJKB_03497 0.41 -0.7
3,656,756 + OHPLBJKB_03497 0.41 +1.1
3,656,756 + OHPLBJKB_03497 0.41 +0.9
3,656,795 - OHPLBJKB_03497 0.43 -1.0
3,658,339 + +0.2
3,659,180 - -0.7
3,659,185 + -0.7
3,659,185 + -0.1
3,659,185 + -0.1
3,659,185 + +0.5
3,659,186 - +0.3
3,659,186 - -0.6
3,659,189 + -0.0
3,659,189 + +0.5
3,659,189 + +1.1
3,659,189 + -1.4
3,659,189 + -0.2
3,659,189 + -0.7
3,659,189 + -0.0
3,659,189 + -0.1
3,659,190 - +0.6
3,659,190 - +0.1
3,659,190 - +0.6
3,659,190 - +0.0
3,659,190 - +0.3
3,659,190 - +0.3
3,659,191 + -0.6
3,659,191 + +0.5
3,659,192 - -1.0
3,659,234 - +1.1
3,659,269 - +0.7
3,659,302 + +0.4
3,659,303 - -0.2
3,659,303 - +0.7
3,659,321 - -1.1

Or see this region's nucleotide sequence