Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_03496 and OHPLBJKB_03497 are separated by 61 nucleotides OHPLBJKB_03497 and OHPLBJKB_03498 are separated by 30 nucleotides
OHPLBJKB_03496: OHPLBJKB_03496 - Methionine aminopeptidase, at 3,654,798 to 3,655,592
_03496
OHPLBJKB_03497: OHPLBJKB_03497 - Bifunctional uridylyltransferase/uridylyl-removing enzyme, at 3,655,654 to 3,658,326
_03497
OHPLBJKB_03498: OHPLBJKB_03498 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 3,658,357 to 3,659,181
_03498
Position (kb)
3655
3656
3657
3658
3659 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3654.671 kb on - strand at 3654.673 kb on + strand at 3654.675 kb on + strand at 3654.675 kb on + strand at 3654.676 kb on - strand at 3654.676 kb on - strand at 3654.676 kb on - strand at 3654.676 kb on - strand at 3654.676 kb on - strand at 3654.754 kb on + strand at 3654.754 kb on + strand at 3654.754 kb on + strand at 3654.754 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.758 kb on + strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.759 kb on - strand at 3654.760 kb on + strand at 3654.760 kb on + strand at 3654.760 kb on + strand at 3654.762 kb on + strand at 3655.591 kb on - strand at 3655.628 kb on + strand at 3655.633 kb on + strand at 3656.756 kb on + strand, within OHPLBJKB_03497 at 3656.756 kb on + strand, within OHPLBJKB_03497 at 3656.756 kb on + strand, within OHPLBJKB_03497 at 3656.756 kb on + strand, within OHPLBJKB_03497 at 3656.795 kb on - strand, within OHPLBJKB_03497 at 3658.339 kb on + strand at 3659.180 kb on - strand at 3659.185 kb on + strand at 3659.185 kb on + strand at 3659.185 kb on + strand at 3659.185 kb on + strand at 3659.186 kb on - strand at 3659.186 kb on - strand at 3659.189 kb on + strand at 3659.189 kb on + strand at 3659.189 kb on + strand at 3659.189 kb on + strand at 3659.189 kb on + strand at 3659.189 kb on + strand at 3659.189 kb on + strand at 3659.189 kb on + strand at 3659.190 kb on - strand at 3659.190 kb on - strand at 3659.190 kb on - strand at 3659.190 kb on - strand at 3659.190 kb on - strand at 3659.190 kb on - strand at 3659.191 kb on + strand at 3659.191 kb on + strand at 3659.192 kb on - strand at 3659.234 kb on - strand at 3659.269 kb on - strand at 3659.302 kb on + strand at 3659.303 kb on - strand at 3659.303 kb on - strand at 3659.321 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 3,654,671 - +0.5 3,654,673 + +0.3 3,654,675 + -0.7 3,654,675 + -0.3 3,654,676 - -0.6 3,654,676 - -1.0 3,654,676 - +0.2 3,654,676 - -0.0 3,654,676 - +0.5 3,654,754 + +0.3 3,654,754 + +1.3 3,654,754 + +1.3 3,654,754 + +0.3 3,654,758 + -0.6 3,654,758 + +0.4 3,654,758 + +1.3 3,654,758 + -1.9 3,654,758 + -0.7 3,654,758 + -1.1 3,654,758 + -0.8 3,654,758 + -2.8 3,654,758 + -0.1 3,654,758 + -0.7 3,654,758 + -1.0 3,654,758 + -0.2 3,654,758 + -0.9 3,654,758 + -0.0 3,654,758 + +0.6 3,654,758 + -2.6 3,654,758 + -0.6 3,654,758 + +0.6 3,654,758 + -0.3 3,654,758 + +1.4 3,654,758 + -0.8 3,654,758 + -0.5 3,654,758 + +0.7 3,654,759 - -0.1 3,654,759 - +0.2 3,654,759 - +0.5 3,654,759 - -0.0 3,654,759 - +0.3 3,654,759 - -0.3 3,654,759 - -0.7 3,654,759 - -1.0 3,654,759 - -0.2 3,654,759 - +0.6 3,654,759 - +0.3 3,654,759 - -0.2 3,654,759 - +0.3 3,654,759 - -0.7 3,654,759 - +0.0 3,654,759 - +0.2 3,654,759 - -0.2 3,654,759 - -1.4 3,654,759 - -0.2 3,654,760 + +0.3 3,654,760 + -1.0 3,654,760 + -1.5 3,654,762 + +0.3 3,655,591 - +1.3 3,655,628 + +0.0 3,655,633 + -0.1 3,656,756 + OHPLBJKB_03497 0.41 -1.3 3,656,756 + OHPLBJKB_03497 0.41 -0.7 3,656,756 + OHPLBJKB_03497 0.41 +1.1 3,656,756 + OHPLBJKB_03497 0.41 +0.9 3,656,795 - OHPLBJKB_03497 0.43 -1.0 3,658,339 + +0.2 3,659,180 - -0.7 3,659,185 + -0.7 3,659,185 + -0.1 3,659,185 + -0.1 3,659,185 + +0.5 3,659,186 - +0.3 3,659,186 - -0.6 3,659,189 + -0.0 3,659,189 + +0.5 3,659,189 + +1.1 3,659,189 + -1.4 3,659,189 + -0.2 3,659,189 + -0.7 3,659,189 + -0.0 3,659,189 + -0.1 3,659,190 - +0.6 3,659,190 - +0.1 3,659,190 - +0.6 3,659,190 - +0.0 3,659,190 - +0.3 3,659,190 - +0.3 3,659,191 + -0.6 3,659,191 + +0.5 3,659,192 - -1.0 3,659,234 - +1.1 3,659,269 - +0.7 3,659,302 + +0.4 3,659,303 - -0.2 3,659,303 - +0.7 3,659,321 - -1.1
Or see this region's nucleotide sequence