Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03358

Experiment: Control_HSF

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_HSF
3,506,052	-		OHPLBJKB_03356	0.76	-0.5
3,506,065	+		OHPLBJKB_03356	0.79	-0.5
3,506,163	-				-0.5
3,506,166	+				-0.6
3,506,187	-				-0.2
3,506,345	+				-0.3
3,506,346	-				-0.4
3,506,346	-				+0.1
3,506,346	-				-0.2
3,506,346	-				+0.4
3,506,346	-				+0.2
3,506,388	+				-0.2
3,506,396	+				-1.0
3,506,397	-				-0.7
3,506,397	-				+0.5
3,506,398	+				-1.5
3,506,398	+				+0.5
3,506,398	+				-0.1
3,506,399	-				-0.3
3,506,399	-				+2.0
3,506,399	-				-0.6
3,506,411	+				-0.2
3,506,411	+				+0.3
3,506,411	+				-0.5
3,506,411	+				+0.9
3,506,411	+				+1.3
3,506,411	+				-2.2
3,506,411	+				-0.8
3,506,411	+				-1.9
3,506,411	+				-0.6
3,506,411	+				-0.4
3,506,411	+				+0.7
3,506,411	+				-1.3
3,506,412	-				-0.7
3,506,412	-				-0.2
3,506,412	-				+0.2
3,506,412	-				-0.3
3,506,412	-				+1.3
3,506,412	-				-0.9
3,506,412	-				+0.6
3,506,412	-				+0.0
3,506,412	-				+0.3
3,506,412	-				-1.6
3,506,412	-				-0.5
3,506,412	-				-0.7
3,506,412	-				+0.6
3,506,412	-				+0.5
3,506,412	-				+0.5
3,506,412	-				+1.1
3,506,412	-				-1.3
3,506,412	-				-2.8
3,506,412	-				+1.7
3,506,412	-				-0.8
3,506,417	+				+1.1
3,506,417	+				-0.9
3,506,418	-				-1.0
3,506,549	+		OHPLBJKB_03357	0.19	-0.7
3,506,697	-		OHPLBJKB_03357	0.49	+0.1
3,506,726	+		OHPLBJKB_03357	0.55	-1.7
3,506,726	+		OHPLBJKB_03357	0.55	+1.5
3,506,727	-		OHPLBJKB_03357	0.55	-1.1
3,506,730	+		OHPLBJKB_03357	0.56	-0.3
3,506,972	+				-0.0
3,506,972	+				-2.1
3,506,973	-				-0.5
3,506,973	-				-1.5
3,506,991	+				+0.7
3,506,999	+				-0.1
3,506,999	+				-0.1
3,506,999	+				+0.4
3,506,999	+				+1.0
3,507,000	-				-0.4
3,507,000	-				+0.8
3,507,000	-				-0.1
3,507,000	-				-0.1
3,507,000	-				+0.3
3,507,000	-				+0.5
3,507,015	+				+0.7
3,507,016	-				-0.4
3,507,018	+				-0.2
3,507,018	+				+0.0
3,507,018	+				-1.9
3,507,018	+				-0.7
3,507,018	+				-0.3
3,507,019	-				-0.6
3,507,019	-				-0.7
3,507,019	-				-1.3
3,507,019	-				+0.3
3,507,039	+				-0.7
3,507,039	+				+0.7
3,507,040	-				-0.8
3,507,080	-				+0.9
3,507,082	+				-0.3
3,507,149	-		OHPLBJKB_03358	0.12	+0.0
3,507,149	-		OHPLBJKB_03358	0.12	+0.5
3,507,152	+		OHPLBJKB_03358	0.12	+0.9
3,507,152	+		OHPLBJKB_03358	0.12	-1.0
3,507,152	+		OHPLBJKB_03358	0.12	+0.3
3,507,153	-		OHPLBJKB_03358	0.12	-0.5
3,507,153	-		OHPLBJKB_03358	0.12	-1.2
3,507,222	+		OHPLBJKB_03358	0.19	+0.1
3,507,296	-		OHPLBJKB_03358	0.27	+0.3
3,507,304	+		OHPLBJKB_03358	0.28	-0.4
3,507,305	-		OHPLBJKB_03358	0.28	+0.1
3,507,319	-		OHPLBJKB_03358	0.30	-0.1
3,507,319	-		OHPLBJKB_03358	0.30	+1.1
3,507,319	-		OHPLBJKB_03358	0.30	+1.9
3,507,340	+		OHPLBJKB_03358	0.32	+0.3
3,507,340	+		OHPLBJKB_03358	0.32	+0.7
3,507,343	+		OHPLBJKB_03358	0.32	+0.3
3,507,343	+		OHPLBJKB_03358	0.32	-0.2
3,507,357	-		OHPLBJKB_03358	0.34	-0.5
3,507,359	-		OHPLBJKB_03358	0.34	-0.0
3,507,385	-		OHPLBJKB_03358	0.37	-0.2
3,507,422	-		OHPLBJKB_03358	0.41	+0.0
3,507,440	+		OHPLBJKB_03358	0.43	+0.3
3,507,440	+		OHPLBJKB_03358	0.43	+0.0
3,507,440	+		OHPLBJKB_03358	0.43	+0.4
3,507,440	+		OHPLBJKB_03358	0.43	+0.5
3,507,440	+		OHPLBJKB_03358	0.43	+0.2
3,507,440	+		OHPLBJKB_03358	0.43	+0.5
3,507,440	+		OHPLBJKB_03358	0.43	+1.3
3,507,440	+		OHPLBJKB_03358	0.43	-0.6
3,507,440	+		OHPLBJKB_03358	0.43	-0.7
3,507,441	-		OHPLBJKB_03358	0.43	+0.6
3,507,441	-		OHPLBJKB_03358	0.43	-0.7
3,507,441	-		OHPLBJKB_03358	0.43	-0.1
3,507,441	-		OHPLBJKB_03358	0.43	+1.0
3,507,441	-		OHPLBJKB_03358	0.43	-0.4
3,507,441	-		OHPLBJKB_03358	0.43	+0.5
3,507,463	+		OHPLBJKB_03358	0.45	-0.5
3,507,466	+		OHPLBJKB_03358	0.46	-0.5
3,507,467	-		OHPLBJKB_03358	0.46	+1.1
3,507,507	+		OHPLBJKB_03358	0.50	+0.9
3,507,507	+		OHPLBJKB_03358	0.50	+0.1
3,507,530	+		OHPLBJKB_03358	0.52	+0.4
3,507,530	+		OHPLBJKB_03358	0.52	+0.5
3,507,531	-		OHPLBJKB_03358	0.53	+0.5
3,507,531	-		OHPLBJKB_03358	0.53	+0.7
3,507,531	-		OHPLBJKB_03358	0.53	+0.4
3,507,531	-		OHPLBJKB_03358	0.53	-0.0
3,507,637	+		OHPLBJKB_03358	0.64	+0.5
3,507,637	+		OHPLBJKB_03358	0.64	+0.5
3,507,638	-		OHPLBJKB_03358	0.64	-0.1
3,507,638	-		OHPLBJKB_03358	0.64	+1.0
3,507,638	-		OHPLBJKB_03358	0.64	+0.0
3,507,638	-		OHPLBJKB_03358	0.64	+0.5
3,507,662	-		OHPLBJKB_03358	0.67	+0.2
3,507,667	+		OHPLBJKB_03358	0.67	+0.5
3,507,779	+		OHPLBJKB_03358	0.79	+0.8
3,507,780	-		OHPLBJKB_03358	0.79	-0.7
3,507,780	-		OHPLBJKB_03358	0.79	+1.4
3,507,780	-		OHPLBJKB_03358	0.79	+0.6
3,507,780	-		OHPLBJKB_03358	0.79	-0.7
3,507,780	-		OHPLBJKB_03358	0.79	-0.3
3,507,780	-		OHPLBJKB_03358	0.79	-1.2
3,507,858	+		OHPLBJKB_03358	0.88	-0.0
3,507,931	-				+0.2
3,507,944	+				-0.3
3,507,945	-				-0.7
3,507,954	+				+0.3
3,508,077	-				+0.4
3,508,082	+				+1.0
3,508,117	+				+0.5
3,508,118	-				+0.3
3,508,118	-				+0.2
3,508,173	+		OHPLBJKB_03359	0.15	+1.3
3,508,173	+		OHPLBJKB_03359	0.15	-0.5
3,508,180	+		OHPLBJKB_03359	0.15	-1.2
3,508,181	-		OHPLBJKB_03359	0.15	-2.5
3,508,191	+		OHPLBJKB_03359	0.16	-0.3
3,508,203	+		OHPLBJKB_03359	0.17	+0.7
3,508,204	-		OHPLBJKB_03359	0.17	-0.7
3,508,248	+		OHPLBJKB_03359	0.21	+1.2
3,508,261	-		OHPLBJKB_03359	0.23	+0.2
3,508,286	+		OHPLBJKB_03359	0.25	-0.6
3,508,292	+		OHPLBJKB_03359	0.25	-0.6
3,508,292	+		OHPLBJKB_03359	0.25	+0.0
3,508,292	+		OHPLBJKB_03359	0.25	-1.4
3,508,333	-		OHPLBJKB_03359	0.29	-0.2
3,508,333	-		OHPLBJKB_03359	0.29	-0.8
3,508,333	-		OHPLBJKB_03359	0.29	-0.3
3,508,333	-		OHPLBJKB_03359	0.29	+0.6
3,508,389	+		OHPLBJKB_03359	0.34	-1.2
3,508,395	+		OHPLBJKB_03359	0.35	+1.3
3,508,395	+		OHPLBJKB_03359	0.35	+0.3
3,508,447	-		OHPLBJKB_03359	0.40	-0.3
3,508,592	-		OHPLBJKB_03359	0.53	-0.3
3,508,592	-		OHPLBJKB_03359	0.53	-0.2
3,508,599	+		OHPLBJKB_03359	0.54	+0.1
3,508,627	-		OHPLBJKB_03359	0.56	-0.2
3,508,679	-		OHPLBJKB_03359	0.61	-1.0
3,508,679	-		OHPLBJKB_03359	0.61	+0.3
3,508,679	-		OHPLBJKB_03359	0.61	+0.4
3,508,679	-		OHPLBJKB_03359	0.61	+0.4
3,508,679	-		OHPLBJKB_03359	0.61	-0.8
3,508,679	-		OHPLBJKB_03359	0.61	-0.3
3,508,824	+		OHPLBJKB_03359	0.74	+1.7
3,508,824	+		OHPLBJKB_03359	0.74	-0.2
3,508,884	+		OHPLBJKB_03359	0.80	+0.3
3,508,884	+		OHPLBJKB_03359	0.80	+0.1
3,508,884	+		OHPLBJKB_03359	0.80	-1.7
3,508,904	-		OHPLBJKB_03359	0.82	-1.7