Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_03232 and OHPLBJKB_03233 are separated by 191 nucleotides OHPLBJKB_03233 and OHPLBJKB_03234 are separated by 208 nucleotides OHPLBJKB_03234 and OHPLBJKB_03235 are separated by 187 nucleotides
OHPLBJKB_03232: OHPLBJKB_03232 - Peptidyl-prolyl cis-trans isomerase D, at 3,372,787 to 3,374,658
_03232
OHPLBJKB_03233: OHPLBJKB_03233 - DNA-binding protein HU-beta, at 3,374,850 to 3,375,122
_03233
OHPLBJKB_03234: OHPLBJKB_03234 - Lon protease, at 3,375,331 to 3,377,685
_03234
OHPLBJKB_03235: OHPLBJKB_03235 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 3,377,873 to 3,379,147
_03235
Position (kb)
3375
3376
3377
3378 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3374.410 kb on - strand, within OHPLBJKB_03232 at 3374.411 kb on + strand, within OHPLBJKB_03232 at 3374.411 kb on + strand, within OHPLBJKB_03232 at 3374.411 kb on + strand, within OHPLBJKB_03232 at 3374.411 kb on + strand, within OHPLBJKB_03232 at 3374.412 kb on - strand, within OHPLBJKB_03232 at 3374.439 kb on - strand, within OHPLBJKB_03232 at 3374.537 kb on + strand at 3374.537 kb on + strand at 3374.537 kb on + strand at 3374.538 kb on - strand at 3374.541 kb on + strand at 3374.581 kb on + strand at 3374.581 kb on + strand at 3374.610 kb on + strand at 3374.663 kb on + strand at 3374.663 kb on + strand at 3374.663 kb on + strand at 3374.664 kb on - strand at 3374.691 kb on + strand at 3374.692 kb on - strand at 3374.706 kb on - strand at 3374.706 kb on - strand at 3374.789 kb on - strand at 3374.805 kb on + strand at 3374.805 kb on + strand at 3374.806 kb on - strand at 3374.852 kb on - strand at 3374.852 kb on - strand at 3374.900 kb on + strand, within OHPLBJKB_03233 at 3374.988 kb on + strand, within OHPLBJKB_03233 at 3374.997 kb on + strand, within OHPLBJKB_03233 at 3374.997 kb on + strand, within OHPLBJKB_03233 at 3374.998 kb on - strand, within OHPLBJKB_03233 at 3374.998 kb on - strand, within OHPLBJKB_03233 at 3375.038 kb on + strand, within OHPLBJKB_03233 at 3375.041 kb on + strand, within OHPLBJKB_03233 at 3375.041 kb on + strand, within OHPLBJKB_03233 at 3375.042 kb on - strand, within OHPLBJKB_03233 at 3375.042 kb on - strand, within OHPLBJKB_03233 at 3375.049 kb on - strand, within OHPLBJKB_03233 at 3375.049 kb on - strand, within OHPLBJKB_03233 at 3375.049 kb on - strand, within OHPLBJKB_03233 at 3375.049 kb on - strand, within OHPLBJKB_03233 at 3375.078 kb on - strand, within OHPLBJKB_03233 at 3375.078 kb on - strand, within OHPLBJKB_03233 at 3375.139 kb on - strand at 3375.141 kb on - strand at 3375.145 kb on + strand at 3375.145 kb on + strand at 3375.145 kb on + strand at 3375.171 kb on - strand at 3375.187 kb on + strand at 3375.188 kb on - strand at 3375.189 kb on + strand at 3375.189 kb on + strand at 3375.189 kb on + strand at 3375.190 kb on - strand at 3375.190 kb on - strand at 3375.190 kb on - strand at 3375.209 kb on + strand at 3375.209 kb on + strand at 3375.210 kb on - strand at 3375.222 kb on - strand at 3375.222 kb on - strand at 3375.249 kb on - strand at 3375.249 kb on - strand at 3375.253 kb on + strand at 3375.254 kb on - strand at 3375.433 kb on + strand at 3375.433 kb on + strand at 3375.433 kb on + strand at 3375.433 kb on + strand at 3375.433 kb on + strand at 3375.433 kb on + strand at 3375.434 kb on - strand at 3375.434 kb on - strand at 3375.434 kb on - strand at 3375.465 kb on + strand at 3375.636 kb on + strand, within OHPLBJKB_03234 at 3375.636 kb on + strand, within OHPLBJKB_03234 at 3375.636 kb on + strand, within OHPLBJKB_03234 at 3375.637 kb on - strand, within OHPLBJKB_03234 at 3375.637 kb on - strand, within OHPLBJKB_03234 at 3375.637 kb on - strand, within OHPLBJKB_03234 at 3375.809 kb on + strand, within OHPLBJKB_03234 at 3375.809 kb on + strand, within OHPLBJKB_03234 at 3375.809 kb on + strand, within OHPLBJKB_03234 at 3375.810 kb on - strand, within OHPLBJKB_03234 at 3376.083 kb on - strand, within OHPLBJKB_03234 at 3376.086 kb on - strand, within OHPLBJKB_03234 at 3376.146 kb on + strand, within OHPLBJKB_03234 at 3376.146 kb on + strand, within OHPLBJKB_03234 at 3376.209 kb on - strand, within OHPLBJKB_03234 at 3376.319 kb on + strand, within OHPLBJKB_03234 at 3376.336 kb on + strand, within OHPLBJKB_03234 at 3376.493 kb on + strand, within OHPLBJKB_03234 at 3376.493 kb on + strand, within OHPLBJKB_03234 at 3376.494 kb on - strand, within OHPLBJKB_03234 at 3376.494 kb on - strand, within OHPLBJKB_03234 at 3376.494 kb on - strand, within OHPLBJKB_03234 at 3376.494 kb on - strand, within OHPLBJKB_03234 at 3376.494 kb on - strand, within OHPLBJKB_03234 at 3376.556 kb on + strand, within OHPLBJKB_03234 at 3376.556 kb on + strand, within OHPLBJKB_03234 at 3376.556 kb on + strand, within OHPLBJKB_03234 at 3376.676 kb on + strand, within OHPLBJKB_03234 at 3376.712 kb on + strand, within OHPLBJKB_03234 at 3376.767 kb on + strand, within OHPLBJKB_03234 at 3376.805 kb on + strand, within OHPLBJKB_03234 at 3376.817 kb on - strand, within OHPLBJKB_03234 at 3376.978 kb on - strand, within OHPLBJKB_03234 at 3377.000 kb on + strand, within OHPLBJKB_03234 at 3377.001 kb on - strand, within OHPLBJKB_03234 at 3377.169 kb on + strand, within OHPLBJKB_03234 at 3377.169 kb on + strand, within OHPLBJKB_03234 at 3377.169 kb on + strand, within OHPLBJKB_03234 at 3377.169 kb on + strand, within OHPLBJKB_03234 at 3377.170 kb on - strand, within OHPLBJKB_03234 at 3377.170 kb on - strand, within OHPLBJKB_03234 at 3377.265 kb on - strand, within OHPLBJKB_03234 at 3377.455 kb on + strand at 3377.456 kb on - strand at 3377.456 kb on - strand at 3377.457 kb on + strand at 3377.492 kb on - strand at 3377.685 kb on + strand at 3377.686 kb on - strand at 3377.699 kb on - strand at 3377.704 kb on - strand at 3377.704 kb on - strand at 3377.704 kb on - strand at 3377.718 kb on - strand at 3377.718 kb on - strand at 3377.751 kb on - strand at 3377.751 kb on - strand at 3377.751 kb on - strand at 3377.751 kb on - strand at 3377.751 kb on - strand at 3377.751 kb on - strand at 3377.751 kb on - strand at 3377.751 kb on - strand at 3377.751 kb on - strand at 3377.754 kb on - strand at 3377.754 kb on - strand at 3377.754 kb on - strand at 3377.760 kb on + strand at 3377.760 kb on + strand at 3377.761 kb on - strand at 3377.761 kb on - strand at 3377.761 kb on - strand at 3377.761 kb on - strand at 3377.761 kb on - strand at 3377.761 kb on - strand at 3377.768 kb on + strand at 3377.768 kb on + strand at 3377.768 kb on + strand at 3377.768 kb on + strand at 3377.768 kb on + strand at 3377.769 kb on - strand at 3377.769 kb on - strand at 3377.769 kb on - strand at 3377.769 kb on - strand at 3377.771 kb on - strand at 3377.806 kb on - strand at 3377.848 kb on + strand at 3377.852 kb on + strand at 3377.852 kb on + strand at 3377.852 kb on + strand at 3377.853 kb on - strand at 3377.858 kb on + strand at 3377.911 kb on - strand at 3377.994 kb on + strand at 3377.994 kb on + strand at 3377.995 kb on - strand at 3377.995 kb on - strand at 3378.021 kb on - strand, within OHPLBJKB_03235 at 3378.071 kb on - strand, within OHPLBJKB_03235 at 3378.124 kb on + strand, within OHPLBJKB_03235 at 3378.412 kb on + strand, within OHPLBJKB_03235 at 3378.412 kb on + strand, within OHPLBJKB_03235 at 3378.413 kb on - strand, within OHPLBJKB_03235 at 3378.424 kb on + strand, within OHPLBJKB_03235 at 3378.491 kb on + strand, within OHPLBJKB_03235 at 3378.497 kb on - strand, within OHPLBJKB_03235 at 3378.527 kb on + strand, within OHPLBJKB_03235 at 3378.603 kb on + strand, within OHPLBJKB_03235 at 3378.603 kb on + strand, within OHPLBJKB_03235 at 3378.604 kb on - strand, within OHPLBJKB_03235 at 3378.636 kb on + strand, within OHPLBJKB_03235 at 3378.636 kb on + strand, within OHPLBJKB_03235
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 3,374,410 - OHPLBJKB_03232 0.87 -1.3 3,374,411 + OHPLBJKB_03232 0.87 -2.4 3,374,411 + OHPLBJKB_03232 0.87 -2.1 3,374,411 + OHPLBJKB_03232 0.87 -0.6 3,374,411 + OHPLBJKB_03232 0.87 +1.3 3,374,412 - OHPLBJKB_03232 0.87 -0.3 3,374,439 - OHPLBJKB_03232 0.88 +0.1 3,374,537 + +0.8 3,374,537 + -0.5 3,374,537 + -0.5 3,374,538 - -0.9 3,374,541 + -0.2 3,374,581 + -1.5 3,374,581 + +0.5 3,374,610 + +0.5 3,374,663 + +0.7 3,374,663 + -0.4 3,374,663 + +0.5 3,374,664 - +2.6 3,374,691 + -1.1 3,374,692 - -1.2 3,374,706 - -1.5 3,374,706 - +0.3 3,374,789 - +0.7 3,374,805 + +0.1 3,374,805 + +1.0 3,374,806 - +0.3 3,374,852 - +0.1 3,374,852 - -0.7 3,374,900 + OHPLBJKB_03233 0.18 -1.1 3,374,988 + OHPLBJKB_03233 0.51 -1.3 3,374,997 + OHPLBJKB_03233 0.54 +0.0 3,374,997 + OHPLBJKB_03233 0.54 -0.4 3,374,998 - OHPLBJKB_03233 0.54 -0.8 3,374,998 - OHPLBJKB_03233 0.54 -0.7 3,375,038 + OHPLBJKB_03233 0.69 -1.7 3,375,041 + OHPLBJKB_03233 0.70 -1.6 3,375,041 + OHPLBJKB_03233 0.70 -0.5 3,375,042 - OHPLBJKB_03233 0.70 +0.1 3,375,042 - OHPLBJKB_03233 0.70 -0.9 3,375,049 - OHPLBJKB_03233 0.73 -1.2 3,375,049 - OHPLBJKB_03233 0.73 +0.4 3,375,049 - OHPLBJKB_03233 0.73 +0.3 3,375,049 - OHPLBJKB_03233 0.73 -1.1 3,375,078 - OHPLBJKB_03233 0.84 -0.9 3,375,078 - OHPLBJKB_03233 0.84 -0.6 3,375,139 - -0.5 3,375,141 - -0.4 3,375,145 + +0.4 3,375,145 + +0.0 3,375,145 + -1.3 3,375,171 - -0.6 3,375,187 + -1.3 3,375,188 - -1.6 3,375,189 + +1.0 3,375,189 + -0.3 3,375,189 + -1.4 3,375,190 - -0.6 3,375,190 - -0.7 3,375,190 - -2.1 3,375,209 + -0.7 3,375,209 + +0.6 3,375,210 - +0.5 3,375,222 - +0.1 3,375,222 - +0.5 3,375,249 - +0.9 3,375,249 - +1.3 3,375,253 + -1.1 3,375,254 - +0.5 3,375,433 + -1.1 3,375,433 + -1.3 3,375,433 + +0.3 3,375,433 + -0.4 3,375,433 + +2.3 3,375,433 + -0.7 3,375,434 - -1.1 3,375,434 - -0.6 3,375,434 - -1.4 3,375,465 + -1.2 3,375,636 + OHPLBJKB_03234 0.13 +0.3 3,375,636 + OHPLBJKB_03234 0.13 -1.2 3,375,636 + OHPLBJKB_03234 0.13 -1.9 3,375,637 - OHPLBJKB_03234 0.13 +0.7 3,375,637 - OHPLBJKB_03234 0.13 -0.7 3,375,637 - OHPLBJKB_03234 0.13 +0.1 3,375,809 + OHPLBJKB_03234 0.20 -1.1 3,375,809 + OHPLBJKB_03234 0.20 +0.3 3,375,809 + OHPLBJKB_03234 0.20 -1.3 3,375,810 - OHPLBJKB_03234 0.20 -0.7 3,376,083 - OHPLBJKB_03234 0.32 -0.7 3,376,086 - OHPLBJKB_03234 0.32 -1.1 3,376,146 + OHPLBJKB_03234 0.35 -1.1 3,376,146 + OHPLBJKB_03234 0.35 -1.1 3,376,209 - OHPLBJKB_03234 0.37 +0.9 3,376,319 + OHPLBJKB_03234 0.42 -0.7 3,376,336 + OHPLBJKB_03234 0.43 -0.5 3,376,493 + OHPLBJKB_03234 0.49 +1.3 3,376,493 + OHPLBJKB_03234 0.49 +0.9 3,376,494 - OHPLBJKB_03234 0.49 +1.1 3,376,494 - OHPLBJKB_03234 0.49 -2.1 3,376,494 - OHPLBJKB_03234 0.49 -0.3 3,376,494 - OHPLBJKB_03234 0.49 -0.3 3,376,494 - OHPLBJKB_03234 0.49 -2.3 3,376,556 + OHPLBJKB_03234 0.52 -0.3 3,376,556 + OHPLBJKB_03234 0.52 -1.2 3,376,556 + OHPLBJKB_03234 0.52 -0.7 3,376,676 + OHPLBJKB_03234 0.57 +1.3 3,376,712 + OHPLBJKB_03234 0.59 -1.1 3,376,767 + OHPLBJKB_03234 0.61 -1.1 3,376,805 + OHPLBJKB_03234 0.63 +0.9 3,376,817 - OHPLBJKB_03234 0.63 -0.8 3,376,978 - OHPLBJKB_03234 0.70 -1.9 3,377,000 + OHPLBJKB_03234 0.71 -1.7 3,377,001 - OHPLBJKB_03234 0.71 +0.7 3,377,169 + OHPLBJKB_03234 0.78 -1.5 3,377,169 + OHPLBJKB_03234 0.78 +0.7 3,377,169 + OHPLBJKB_03234 0.78 -1.5 3,377,169 + OHPLBJKB_03234 0.78 +0.7 3,377,170 - OHPLBJKB_03234 0.78 -0.1 3,377,170 - OHPLBJKB_03234 0.78 -1.1 3,377,265 - OHPLBJKB_03234 0.82 -1.1 3,377,455 + -1.1 3,377,456 - +0.3 3,377,456 - +1.3 3,377,457 + +1.3 3,377,492 - +1.3 3,377,685 + +0.4 3,377,686 - -0.1 3,377,699 - +0.5 3,377,704 - -0.3 3,377,704 - -1.0 3,377,704 - +0.3 3,377,718 - +1.5 3,377,718 - +0.8 3,377,751 - +1.0 3,377,751 - -0.3 3,377,751 - +0.1 3,377,751 - -1.2 3,377,751 - +0.7 3,377,751 - +0.7 3,377,751 - +0.2 3,377,751 - -0.5 3,377,751 - +1.2 3,377,754 - +0.6 3,377,754 - -0.6 3,377,754 - -0.5 3,377,760 + -0.3 3,377,760 + -1.7 3,377,761 - -0.4 3,377,761 - -0.2 3,377,761 - +0.6 3,377,761 - -0.2 3,377,761 - -0.7 3,377,761 - -0.7 3,377,768 + -0.1 3,377,768 + +0.3 3,377,768 + -0.7 3,377,768 + -0.3 3,377,768 + -1.1 3,377,769 - -0.8 3,377,769 - -0.3 3,377,769 - +0.5 3,377,769 - -0.9 3,377,771 - -0.3 3,377,806 - +0.1 3,377,848 + +0.2 3,377,852 + -1.0 3,377,852 + +0.3 3,377,852 + -1.1 3,377,853 - -0.5 3,377,858 + -0.4 3,377,911 - +1.5 3,377,994 + -0.7 3,377,994 + -0.1 3,377,995 - -1.7 3,377,995 - -1.7 3,378,021 - OHPLBJKB_03235 0.12 -1.9 3,378,071 - OHPLBJKB_03235 0.16 -1.3 3,378,124 + OHPLBJKB_03235 0.20 -0.2 3,378,412 + OHPLBJKB_03235 0.42 -0.9 3,378,412 + OHPLBJKB_03235 0.42 +1.3 3,378,413 - OHPLBJKB_03235 0.42 -1.4 3,378,424 + OHPLBJKB_03235 0.43 -2.3 3,378,491 + OHPLBJKB_03235 0.48 -0.3 3,378,497 - OHPLBJKB_03235 0.49 -0.7 3,378,527 + OHPLBJKB_03235 0.51 -0.3 3,378,603 + OHPLBJKB_03235 0.57 -0.3 3,378,603 + OHPLBJKB_03235 0.57 -1.4 3,378,604 - OHPLBJKB_03235 0.57 +0.3 3,378,636 + OHPLBJKB_03235 0.60 +1.3 3,378,636 + OHPLBJKB_03235 0.60 -1.3
Or see this region's nucleotide sequence