Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03114

Experiment: Control_HSF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_03113 and OHPLBJKB_03114 are separated by 374 nucleotidesOHPLBJKB_03114 and OHPLBJKB_03115 are separated by 3 nucleotides OHPLBJKB_03113: OHPLBJKB_03113 - Isochorismate synthase EntC, at 3,240,497 to 3,241,672 _03113 OHPLBJKB_03114: OHPLBJKB_03114 - Ferrienterobactin-binding periplasmic protein, at 3,242,047 to 3,243,003 _03114 OHPLBJKB_03115: OHPLBJKB_03115 - Enterobactin exporter EntS, at 3,243,007 to 3,244,257 _03115 Position (kb) 3242 3243 3244Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3241.051 kb on + strand, within OHPLBJKB_03113at 3241.052 kb on - strand, within OHPLBJKB_03113at 3241.073 kb on + strand, within OHPLBJKB_03113at 3241.073 kb on + strand, within OHPLBJKB_03113at 3241.074 kb on - strand, within OHPLBJKB_03113at 3241.074 kb on - strand, within OHPLBJKB_03113at 3241.074 kb on - strand, within OHPLBJKB_03113at 3241.137 kb on + strand, within OHPLBJKB_03113at 3241.176 kb on - strand, within OHPLBJKB_03113at 3241.405 kb on + strand, within OHPLBJKB_03113at 3241.406 kb on - strand, within OHPLBJKB_03113at 3241.406 kb on - strand, within OHPLBJKB_03113at 3241.407 kb on + strand, within OHPLBJKB_03113at 3241.407 kb on + strand, within OHPLBJKB_03113at 3241.407 kb on + strand, within OHPLBJKB_03113at 3241.407 kb on + strand, within OHPLBJKB_03113at 3241.407 kb on + strand, within OHPLBJKB_03113at 3241.407 kb on + strand, within OHPLBJKB_03113at 3241.582 kb on + strandat 3241.603 kb on + strandat 3241.604 kb on - strandat 3241.646 kb on + strandat 3241.646 kb on + strandat 3241.647 kb on - strandat 3241.666 kb on + strandat 3241.666 kb on + strandat 3241.667 kb on - strandat 3241.672 kb on + strandat 3241.673 kb on - strandat 3241.673 kb on - strandat 3241.701 kb on + strandat 3241.704 kb on + strandat 3241.711 kb on + strandat 3241.738 kb on + strandat 3241.738 kb on + strandat 3241.755 kb on + strandat 3241.756 kb on - strandat 3241.756 kb on - strandat 3241.756 kb on - strandat 3241.756 kb on - strandat 3242.024 kb on + strandat 3242.027 kb on + strandat 3242.030 kb on + strandat 3242.031 kb on - strandat 3242.081 kb on + strandat 3242.081 kb on + strandat 3242.082 kb on - strandat 3242.167 kb on - strand, within OHPLBJKB_03114at 3242.167 kb on - strand, within OHPLBJKB_03114at 3242.167 kb on - strand, within OHPLBJKB_03114at 3242.167 kb on - strand, within OHPLBJKB_03114at 3242.191 kb on - strand, within OHPLBJKB_03114at 3242.351 kb on - strand, within OHPLBJKB_03114at 3242.351 kb on - strand, within OHPLBJKB_03114at 3242.443 kb on + strand, within OHPLBJKB_03114at 3242.443 kb on + strand, within OHPLBJKB_03114at 3242.474 kb on + strand, within OHPLBJKB_03114at 3242.475 kb on - strand, within OHPLBJKB_03114at 3242.485 kb on + strand, within OHPLBJKB_03114at 3242.485 kb on + strand, within OHPLBJKB_03114at 3242.485 kb on + strand, within OHPLBJKB_03114at 3242.578 kb on - strand, within OHPLBJKB_03114at 3242.641 kb on + strand, within OHPLBJKB_03114at 3242.644 kb on - strand, within OHPLBJKB_03114at 3242.745 kb on - strand, within OHPLBJKB_03114at 3242.766 kb on + strand, within OHPLBJKB_03114at 3242.868 kb on + strand, within OHPLBJKB_03114at 3242.869 kb on - strand, within OHPLBJKB_03114at 3242.869 kb on - strand, within OHPLBJKB_03114at 3242.872 kb on + strand, within OHPLBJKB_03114at 3242.872 kb on + strand, within OHPLBJKB_03114at 3242.873 kb on - strand, within OHPLBJKB_03114at 3242.873 kb on - strand, within OHPLBJKB_03114at 3242.873 kb on - strand, within OHPLBJKB_03114at 3242.873 kb on - strand, within OHPLBJKB_03114at 3242.923 kb on + strandat 3242.960 kb on - strandat 3242.982 kb on + strandat 3242.988 kb on + strandat 3242.989 kb on - strandat 3243.001 kb on + strandat 3243.002 kb on - strandat 3243.009 kb on - strandat 3243.077 kb on - strandat 3243.261 kb on - strand, within OHPLBJKB_03115at 3243.261 kb on - strand, within OHPLBJKB_03115at 3243.408 kb on + strand, within OHPLBJKB_03115at 3243.408 kb on + strand, within OHPLBJKB_03115at 3243.408 kb on + strand, within OHPLBJKB_03115at 3243.408 kb on + strand, within OHPLBJKB_03115at 3243.408 kb on + strand, within OHPLBJKB_03115at 3243.408 kb on + strand, within OHPLBJKB_03115at 3243.408 kb on + strand, within OHPLBJKB_03115at 3243.409 kb on - strand, within OHPLBJKB_03115at 3243.409 kb on - strand, within OHPLBJKB_03115at 3243.409 kb on - strand, within OHPLBJKB_03115at 3243.409 kb on - strand, within OHPLBJKB_03115at 3243.553 kb on + strand, within OHPLBJKB_03115at 3243.686 kb on - strand, within OHPLBJKB_03115at 3243.693 kb on + strand, within OHPLBJKB_03115at 3243.723 kb on - strand, within OHPLBJKB_03115at 3243.723 kb on - strand, within OHPLBJKB_03115at 3243.865 kb on + strand, within OHPLBJKB_03115at 3243.913 kb on + strand, within OHPLBJKB_03115at 3243.913 kb on + strand, within OHPLBJKB_03115at 3243.914 kb on - strand, within OHPLBJKB_03115at 3243.917 kb on + strand, within OHPLBJKB_03115at 3243.955 kb on - strand, within OHPLBJKB_03115

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_HSF
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3,241,051 + OHPLBJKB_03113 0.47 -0.5
3,241,052 - OHPLBJKB_03113 0.47 -0.7
3,241,073 + OHPLBJKB_03113 0.49 +0.2
3,241,073 + OHPLBJKB_03113 0.49 -0.1
3,241,074 - OHPLBJKB_03113 0.49 -0.1
3,241,074 - OHPLBJKB_03113 0.49 -0.5
3,241,074 - OHPLBJKB_03113 0.49 -0.7
3,241,137 + OHPLBJKB_03113 0.54 -0.1
3,241,176 - OHPLBJKB_03113 0.58 +0.1
3,241,405 + OHPLBJKB_03113 0.77 -1.3
3,241,406 - OHPLBJKB_03113 0.77 +0.3
3,241,406 - OHPLBJKB_03113 0.77 -0.3
3,241,407 + OHPLBJKB_03113 0.77 -0.1
3,241,407 + OHPLBJKB_03113 0.77 -0.4
3,241,407 + OHPLBJKB_03113 0.77 -0.5
3,241,407 + OHPLBJKB_03113 0.77 -0.5
3,241,407 + OHPLBJKB_03113 0.77 +0.5
3,241,407 + OHPLBJKB_03113 0.77 -0.2
3,241,582 + -1.1
3,241,603 + -1.3
3,241,604 - -0.5
3,241,646 + +1.0
3,241,646 + +0.0
3,241,647 - -0.9
3,241,666 + +0.7
3,241,666 + +0.4
3,241,667 - -0.9
3,241,672 + +1.5
3,241,673 - +0.3
3,241,673 - +0.3
3,241,701 + +1.1
3,241,704 + +0.5
3,241,711 + -0.1
3,241,738 + -0.2
3,241,738 + -1.9
3,241,755 + +2.6
3,241,756 - +1.1
3,241,756 - +0.3
3,241,756 - -0.3
3,241,756 - -1.1
3,242,024 + +0.7
3,242,027 + -0.3
3,242,030 + +0.3
3,242,031 - -0.1
3,242,081 + +0.4
3,242,081 + +0.9
3,242,082 - +0.7
3,242,167 - OHPLBJKB_03114 0.13 -0.3
3,242,167 - OHPLBJKB_03114 0.13 -0.5
3,242,167 - OHPLBJKB_03114 0.13 -0.7
3,242,167 - OHPLBJKB_03114 0.13 -0.9
3,242,191 - OHPLBJKB_03114 0.15 +0.3
3,242,351 - OHPLBJKB_03114 0.32 +2.0
3,242,351 - OHPLBJKB_03114 0.32 +3.3
3,242,443 + OHPLBJKB_03114 0.41 -1.1
3,242,443 + OHPLBJKB_03114 0.41 +0.5
3,242,474 + OHPLBJKB_03114 0.45 -1.3
3,242,475 - OHPLBJKB_03114 0.45 -0.3
3,242,485 + OHPLBJKB_03114 0.46 -0.7
3,242,485 + OHPLBJKB_03114 0.46 -1.3
3,242,485 + OHPLBJKB_03114 0.46 -0.3
3,242,578 - OHPLBJKB_03114 0.55 -1.1
3,242,641 + OHPLBJKB_03114 0.62 -1.1
3,242,644 - OHPLBJKB_03114 0.62 -1.5
3,242,745 - OHPLBJKB_03114 0.73 +0.3
3,242,766 + OHPLBJKB_03114 0.75 +0.3
3,242,868 + OHPLBJKB_03114 0.86 -1.5
3,242,869 - OHPLBJKB_03114 0.86 +1.3
3,242,869 - OHPLBJKB_03114 0.86 +0.7
3,242,872 + OHPLBJKB_03114 0.86 +0.5
3,242,872 + OHPLBJKB_03114 0.86 +0.7
3,242,873 - OHPLBJKB_03114 0.86 -0.5
3,242,873 - OHPLBJKB_03114 0.86 -0.3
3,242,873 - OHPLBJKB_03114 0.86 +1.3
3,242,873 - OHPLBJKB_03114 0.86 -0.1
3,242,923 + -0.3
3,242,960 - -2.2
3,242,982 + -0.0
3,242,988 + +0.3
3,242,989 - -0.3
3,243,001 + -0.7
3,243,002 - +0.6
3,243,009 - +0.2
3,243,077 - +0.8
3,243,261 - OHPLBJKB_03115 0.20 -0.5
3,243,261 - OHPLBJKB_03115 0.20 -0.7
3,243,408 + OHPLBJKB_03115 0.32 -1.7
3,243,408 + OHPLBJKB_03115 0.32 +0.1
3,243,408 + OHPLBJKB_03115 0.32 -1.9
3,243,408 + OHPLBJKB_03115 0.32 +0.4
3,243,408 + OHPLBJKB_03115 0.32 +0.5
3,243,408 + OHPLBJKB_03115 0.32 +0.1
3,243,408 + OHPLBJKB_03115 0.32 +0.2
3,243,409 - OHPLBJKB_03115 0.32 -0.7
3,243,409 - OHPLBJKB_03115 0.32 +0.1
3,243,409 - OHPLBJKB_03115 0.32 -0.6
3,243,409 - OHPLBJKB_03115 0.32 -0.2
3,243,553 + OHPLBJKB_03115 0.44 -0.9
3,243,686 - OHPLBJKB_03115 0.54 -0.7
3,243,693 + OHPLBJKB_03115 0.55 -0.4
3,243,723 - OHPLBJKB_03115 0.57 +0.3
3,243,723 - OHPLBJKB_03115 0.57 +0.4
3,243,865 + OHPLBJKB_03115 0.69 +0.8
3,243,913 + OHPLBJKB_03115 0.72 +1.4
3,243,913 + OHPLBJKB_03115 0.72 +0.3
3,243,914 - OHPLBJKB_03115 0.73 +2.8
3,243,917 + OHPLBJKB_03115 0.73 -0.2
3,243,955 - OHPLBJKB_03115 0.76 +0.3

Or see this region's nucleotide sequence