Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_03113 and OHPLBJKB_03114 are separated by 374 nucleotides OHPLBJKB_03114 and OHPLBJKB_03115 are separated by 3 nucleotides
OHPLBJKB_03113: OHPLBJKB_03113 - Isochorismate synthase EntC, at 3,240,497 to 3,241,672
_03113
OHPLBJKB_03114: OHPLBJKB_03114 - Ferrienterobactin-binding periplasmic protein, at 3,242,047 to 3,243,003
_03114
OHPLBJKB_03115: OHPLBJKB_03115 - Enterobactin exporter EntS, at 3,243,007 to 3,244,257
_03115
Position (kb)
3242
3243
3244 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3241.051 kb on + strand, within OHPLBJKB_03113 at 3241.052 kb on - strand, within OHPLBJKB_03113 at 3241.073 kb on + strand, within OHPLBJKB_03113 at 3241.073 kb on + strand, within OHPLBJKB_03113 at 3241.074 kb on - strand, within OHPLBJKB_03113 at 3241.074 kb on - strand, within OHPLBJKB_03113 at 3241.074 kb on - strand, within OHPLBJKB_03113 at 3241.137 kb on + strand, within OHPLBJKB_03113 at 3241.176 kb on - strand, within OHPLBJKB_03113 at 3241.405 kb on + strand, within OHPLBJKB_03113 at 3241.406 kb on - strand, within OHPLBJKB_03113 at 3241.406 kb on - strand, within OHPLBJKB_03113 at 3241.407 kb on + strand, within OHPLBJKB_03113 at 3241.407 kb on + strand, within OHPLBJKB_03113 at 3241.407 kb on + strand, within OHPLBJKB_03113 at 3241.407 kb on + strand, within OHPLBJKB_03113 at 3241.407 kb on + strand, within OHPLBJKB_03113 at 3241.407 kb on + strand, within OHPLBJKB_03113 at 3241.582 kb on + strand at 3241.603 kb on + strand at 3241.604 kb on - strand at 3241.646 kb on + strand at 3241.646 kb on + strand at 3241.647 kb on - strand at 3241.666 kb on + strand at 3241.666 kb on + strand at 3241.667 kb on - strand at 3241.672 kb on + strand at 3241.673 kb on - strand at 3241.673 kb on - strand at 3241.701 kb on + strand at 3241.704 kb on + strand at 3241.711 kb on + strand at 3241.738 kb on + strand at 3241.738 kb on + strand at 3241.755 kb on + strand at 3241.756 kb on - strand at 3241.756 kb on - strand at 3241.756 kb on - strand at 3241.756 kb on - strand at 3242.024 kb on + strand at 3242.027 kb on + strand at 3242.030 kb on + strand at 3242.031 kb on - strand at 3242.081 kb on + strand at 3242.081 kb on + strand at 3242.082 kb on - strand at 3242.167 kb on - strand, within OHPLBJKB_03114 at 3242.167 kb on - strand, within OHPLBJKB_03114 at 3242.167 kb on - strand, within OHPLBJKB_03114 at 3242.167 kb on - strand, within OHPLBJKB_03114 at 3242.191 kb on - strand, within OHPLBJKB_03114 at 3242.351 kb on - strand, within OHPLBJKB_03114 at 3242.351 kb on - strand, within OHPLBJKB_03114 at 3242.443 kb on + strand, within OHPLBJKB_03114 at 3242.443 kb on + strand, within OHPLBJKB_03114 at 3242.474 kb on + strand, within OHPLBJKB_03114 at 3242.475 kb on - strand, within OHPLBJKB_03114 at 3242.485 kb on + strand, within OHPLBJKB_03114 at 3242.485 kb on + strand, within OHPLBJKB_03114 at 3242.485 kb on + strand, within OHPLBJKB_03114 at 3242.578 kb on - strand, within OHPLBJKB_03114 at 3242.641 kb on + strand, within OHPLBJKB_03114 at 3242.644 kb on - strand, within OHPLBJKB_03114 at 3242.745 kb on - strand, within OHPLBJKB_03114 at 3242.766 kb on + strand, within OHPLBJKB_03114 at 3242.868 kb on + strand, within OHPLBJKB_03114 at 3242.869 kb on - strand, within OHPLBJKB_03114 at 3242.869 kb on - strand, within OHPLBJKB_03114 at 3242.872 kb on + strand, within OHPLBJKB_03114 at 3242.872 kb on + strand, within OHPLBJKB_03114 at 3242.873 kb on - strand, within OHPLBJKB_03114 at 3242.873 kb on - strand, within OHPLBJKB_03114 at 3242.873 kb on - strand, within OHPLBJKB_03114 at 3242.873 kb on - strand, within OHPLBJKB_03114 at 3242.923 kb on + strand at 3242.960 kb on - strand at 3242.982 kb on + strand at 3242.988 kb on + strand at 3242.989 kb on - strand at 3243.001 kb on + strand at 3243.002 kb on - strand at 3243.009 kb on - strand at 3243.077 kb on - strand at 3243.261 kb on - strand, within OHPLBJKB_03115 at 3243.261 kb on - strand, within OHPLBJKB_03115 at 3243.408 kb on + strand, within OHPLBJKB_03115 at 3243.408 kb on + strand, within OHPLBJKB_03115 at 3243.408 kb on + strand, within OHPLBJKB_03115 at 3243.408 kb on + strand, within OHPLBJKB_03115 at 3243.408 kb on + strand, within OHPLBJKB_03115 at 3243.408 kb on + strand, within OHPLBJKB_03115 at 3243.408 kb on + strand, within OHPLBJKB_03115 at 3243.409 kb on - strand, within OHPLBJKB_03115 at 3243.409 kb on - strand, within OHPLBJKB_03115 at 3243.409 kb on - strand, within OHPLBJKB_03115 at 3243.409 kb on - strand, within OHPLBJKB_03115 at 3243.553 kb on + strand, within OHPLBJKB_03115 at 3243.686 kb on - strand, within OHPLBJKB_03115 at 3243.693 kb on + strand, within OHPLBJKB_03115 at 3243.723 kb on - strand, within OHPLBJKB_03115 at 3243.723 kb on - strand, within OHPLBJKB_03115 at 3243.865 kb on + strand, within OHPLBJKB_03115 at 3243.913 kb on + strand, within OHPLBJKB_03115 at 3243.913 kb on + strand, within OHPLBJKB_03115 at 3243.914 kb on - strand, within OHPLBJKB_03115 at 3243.917 kb on + strand, within OHPLBJKB_03115 at 3243.955 kb on - strand, within OHPLBJKB_03115
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 3,241,051 + OHPLBJKB_03113 0.47 -0.5 3,241,052 - OHPLBJKB_03113 0.47 -0.7 3,241,073 + OHPLBJKB_03113 0.49 +0.2 3,241,073 + OHPLBJKB_03113 0.49 -0.1 3,241,074 - OHPLBJKB_03113 0.49 -0.1 3,241,074 - OHPLBJKB_03113 0.49 -0.5 3,241,074 - OHPLBJKB_03113 0.49 -0.7 3,241,137 + OHPLBJKB_03113 0.54 -0.1 3,241,176 - OHPLBJKB_03113 0.58 +0.1 3,241,405 + OHPLBJKB_03113 0.77 -1.3 3,241,406 - OHPLBJKB_03113 0.77 +0.3 3,241,406 - OHPLBJKB_03113 0.77 -0.3 3,241,407 + OHPLBJKB_03113 0.77 -0.1 3,241,407 + OHPLBJKB_03113 0.77 -0.4 3,241,407 + OHPLBJKB_03113 0.77 -0.5 3,241,407 + OHPLBJKB_03113 0.77 -0.5 3,241,407 + OHPLBJKB_03113 0.77 +0.5 3,241,407 + OHPLBJKB_03113 0.77 -0.2 3,241,582 + -1.1 3,241,603 + -1.3 3,241,604 - -0.5 3,241,646 + +1.0 3,241,646 + +0.0 3,241,647 - -0.9 3,241,666 + +0.7 3,241,666 + +0.4 3,241,667 - -0.9 3,241,672 + +1.5 3,241,673 - +0.3 3,241,673 - +0.3 3,241,701 + +1.1 3,241,704 + +0.5 3,241,711 + -0.1 3,241,738 + -0.2 3,241,738 + -1.9 3,241,755 + +2.6 3,241,756 - +1.1 3,241,756 - +0.3 3,241,756 - -0.3 3,241,756 - -1.1 3,242,024 + +0.7 3,242,027 + -0.3 3,242,030 + +0.3 3,242,031 - -0.1 3,242,081 + +0.4 3,242,081 + +0.9 3,242,082 - +0.7 3,242,167 - OHPLBJKB_03114 0.13 -0.3 3,242,167 - OHPLBJKB_03114 0.13 -0.5 3,242,167 - OHPLBJKB_03114 0.13 -0.7 3,242,167 - OHPLBJKB_03114 0.13 -0.9 3,242,191 - OHPLBJKB_03114 0.15 +0.3 3,242,351 - OHPLBJKB_03114 0.32 +2.0 3,242,351 - OHPLBJKB_03114 0.32 +3.3 3,242,443 + OHPLBJKB_03114 0.41 -1.1 3,242,443 + OHPLBJKB_03114 0.41 +0.5 3,242,474 + OHPLBJKB_03114 0.45 -1.3 3,242,475 - OHPLBJKB_03114 0.45 -0.3 3,242,485 + OHPLBJKB_03114 0.46 -0.7 3,242,485 + OHPLBJKB_03114 0.46 -1.3 3,242,485 + OHPLBJKB_03114 0.46 -0.3 3,242,578 - OHPLBJKB_03114 0.55 -1.1 3,242,641 + OHPLBJKB_03114 0.62 -1.1 3,242,644 - OHPLBJKB_03114 0.62 -1.5 3,242,745 - OHPLBJKB_03114 0.73 +0.3 3,242,766 + OHPLBJKB_03114 0.75 +0.3 3,242,868 + OHPLBJKB_03114 0.86 -1.5 3,242,869 - OHPLBJKB_03114 0.86 +1.3 3,242,869 - OHPLBJKB_03114 0.86 +0.7 3,242,872 + OHPLBJKB_03114 0.86 +0.5 3,242,872 + OHPLBJKB_03114 0.86 +0.7 3,242,873 - OHPLBJKB_03114 0.86 -0.5 3,242,873 - OHPLBJKB_03114 0.86 -0.3 3,242,873 - OHPLBJKB_03114 0.86 +1.3 3,242,873 - OHPLBJKB_03114 0.86 -0.1 3,242,923 + -0.3 3,242,960 - -2.2 3,242,982 + -0.0 3,242,988 + +0.3 3,242,989 - -0.3 3,243,001 + -0.7 3,243,002 - +0.6 3,243,009 - +0.2 3,243,077 - +0.8 3,243,261 - OHPLBJKB_03115 0.20 -0.5 3,243,261 - OHPLBJKB_03115 0.20 -0.7 3,243,408 + OHPLBJKB_03115 0.32 -1.7 3,243,408 + OHPLBJKB_03115 0.32 +0.1 3,243,408 + OHPLBJKB_03115 0.32 -1.9 3,243,408 + OHPLBJKB_03115 0.32 +0.4 3,243,408 + OHPLBJKB_03115 0.32 +0.5 3,243,408 + OHPLBJKB_03115 0.32 +0.1 3,243,408 + OHPLBJKB_03115 0.32 +0.2 3,243,409 - OHPLBJKB_03115 0.32 -0.7 3,243,409 - OHPLBJKB_03115 0.32 +0.1 3,243,409 - OHPLBJKB_03115 0.32 -0.6 3,243,409 - OHPLBJKB_03115 0.32 -0.2 3,243,553 + OHPLBJKB_03115 0.44 -0.9 3,243,686 - OHPLBJKB_03115 0.54 -0.7 3,243,693 + OHPLBJKB_03115 0.55 -0.4 3,243,723 - OHPLBJKB_03115 0.57 +0.3 3,243,723 - OHPLBJKB_03115 0.57 +0.4 3,243,865 + OHPLBJKB_03115 0.69 +0.8 3,243,913 + OHPLBJKB_03115 0.72 +1.4 3,243,913 + OHPLBJKB_03115 0.72 +0.3 3,243,914 - OHPLBJKB_03115 0.73 +2.8 3,243,917 + OHPLBJKB_03115 0.73 -0.2 3,243,955 - OHPLBJKB_03115 0.76 +0.3
Or see this region's nucleotide sequence