Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02766 and OHPLBJKB_02767 are separated by 236 nucleotides OHPLBJKB_02767 and OHPLBJKB_02768 are separated by 99 nucleotides
OHPLBJKB_02766: OHPLBJKB_02766 - Pyruvate formate-lyase 1-activating enzyme, at 2,891,216 to 2,891,956
_02766
OHPLBJKB_02767: OHPLBJKB_02767 - Glutathione-regulated potassium-efflux system ancillary protein KefG, at 2,892,193 to 2,892,627
_02767
OHPLBJKB_02768: OHPLBJKB_02768 - HTH-type transcriptional regulator PgrR, at 2,892,727 to 2,893,635
_02768
Position (kb)
2892
2893 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2891.321 kb on + strand, within OHPLBJKB_02766 at 2891.322 kb on - strand, within OHPLBJKB_02766 at 2891.322 kb on - strand, within OHPLBJKB_02766 at 2891.368 kb on + strand, within OHPLBJKB_02766 at 2891.369 kb on - strand, within OHPLBJKB_02766 at 2891.413 kb on + strand, within OHPLBJKB_02766 at 2891.519 kb on - strand, within OHPLBJKB_02766 at 2891.583 kb on + strand, within OHPLBJKB_02766 at 2891.864 kb on + strand, within OHPLBJKB_02766 at 2891.942 kb on - strand at 2891.946 kb on + strand at 2891.946 kb on + strand at 2891.980 kb on - strand at 2892.039 kb on + strand at 2892.040 kb on - strand at 2892.042 kb on - strand at 2892.050 kb on + strand at 2892.051 kb on - strand at 2892.116 kb on + strand at 2892.116 kb on + strand at 2892.124 kb on + strand at 2892.124 kb on + strand at 2892.127 kb on + strand at 2892.182 kb on + strand at 2892.306 kb on + strand, within OHPLBJKB_02767 at 2892.313 kb on + strand, within OHPLBJKB_02767 at 2892.335 kb on - strand, within OHPLBJKB_02767 at 2892.565 kb on - strand, within OHPLBJKB_02767 at 2892.608 kb on + strand at 2892.609 kb on - strand at 2892.612 kb on + strand at 2892.708 kb on + strand at 2892.708 kb on + strand at 2892.738 kb on + strand at 2892.835 kb on - strand, within OHPLBJKB_02768 at 2892.835 kb on - strand, within OHPLBJKB_02768 at 2892.838 kb on - strand, within OHPLBJKB_02768 at 2892.841 kb on - strand, within OHPLBJKB_02768 at 2892.968 kb on + strand, within OHPLBJKB_02768 at 2892.968 kb on + strand, within OHPLBJKB_02768 at 2893.043 kb on + strand, within OHPLBJKB_02768 at 2893.185 kb on + strand, within OHPLBJKB_02768 at 2893.220 kb on + strand, within OHPLBJKB_02768 at 2893.221 kb on - strand, within OHPLBJKB_02768 at 2893.221 kb on - strand, within OHPLBJKB_02768 at 2893.226 kb on + strand, within OHPLBJKB_02768 at 2893.226 kb on + strand, within OHPLBJKB_02768 at 2893.227 kb on - strand, within OHPLBJKB_02768 at 2893.255 kb on + strand, within OHPLBJKB_02768 at 2893.288 kb on - strand, within OHPLBJKB_02768 at 2893.378 kb on - strand, within OHPLBJKB_02768 at 2893.447 kb on + strand, within OHPLBJKB_02768 at 2893.447 kb on + strand, within OHPLBJKB_02768 at 2893.465 kb on + strand, within OHPLBJKB_02768 at 2893.534 kb on + strand, within OHPLBJKB_02768 at 2893.535 kb on - strand, within OHPLBJKB_02768 at 2893.535 kb on - strand, within OHPLBJKB_02768 at 2893.552 kb on + strand at 2893.552 kb on + strand at 2893.553 kb on - strand at 2893.553 kb on - strand at 2893.553 kb on - strand at 2893.553 kb on - strand at 2893.553 kb on - strand at 2893.553 kb on - strand at 2893.553 kb on - strand at 2893.554 kb on + strand at 2893.554 kb on + strand at 2893.555 kb on - strand at 2893.555 kb on - strand at 2893.555 kb on - strand at 2893.555 kb on - strand at 2893.555 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 2,891,321 + OHPLBJKB_02766 0.14 +0.1 2,891,322 - OHPLBJKB_02766 0.14 +1.3 2,891,322 - OHPLBJKB_02766 0.14 +0.5 2,891,368 + OHPLBJKB_02766 0.21 -0.1 2,891,369 - OHPLBJKB_02766 0.21 +1.4 2,891,413 + OHPLBJKB_02766 0.27 +0.1 2,891,519 - OHPLBJKB_02766 0.41 +0.1 2,891,583 + OHPLBJKB_02766 0.50 +0.3 2,891,864 + OHPLBJKB_02766 0.87 -0.5 2,891,942 - +0.4 2,891,946 + -0.4 2,891,946 + -0.1 2,891,980 - -0.5 2,892,039 + +0.2 2,892,040 - -0.5 2,892,042 - +0.5 2,892,050 + +1.3 2,892,051 - +0.1 2,892,116 + -0.6 2,892,116 + +1.7 2,892,124 + -0.1 2,892,124 + +0.7 2,892,127 + -0.7 2,892,182 + +2.6 2,892,306 + OHPLBJKB_02767 0.26 -0.7 2,892,313 + OHPLBJKB_02767 0.28 -1.3 2,892,335 - OHPLBJKB_02767 0.33 +0.3 2,892,565 - OHPLBJKB_02767 0.86 +0.3 2,892,608 + -1.0 2,892,609 - -0.6 2,892,612 + +1.1 2,892,708 + -0.1 2,892,708 + +0.0 2,892,738 + -0.5 2,892,835 - OHPLBJKB_02768 0.12 -0.1 2,892,835 - OHPLBJKB_02768 0.12 +0.1 2,892,838 - OHPLBJKB_02768 0.12 +0.1 2,892,841 - OHPLBJKB_02768 0.13 +0.3 2,892,968 + OHPLBJKB_02768 0.27 -0.3 2,892,968 + OHPLBJKB_02768 0.27 +1.7 2,893,043 + OHPLBJKB_02768 0.35 -1.7 2,893,185 + OHPLBJKB_02768 0.50 -0.7 2,893,220 + OHPLBJKB_02768 0.54 +0.6 2,893,221 - OHPLBJKB_02768 0.54 -1.7 2,893,221 - OHPLBJKB_02768 0.54 -0.9 2,893,226 + OHPLBJKB_02768 0.55 +0.5 2,893,226 + OHPLBJKB_02768 0.55 +1.0 2,893,227 - OHPLBJKB_02768 0.55 -0.3 2,893,255 + OHPLBJKB_02768 0.58 +0.2 2,893,288 - OHPLBJKB_02768 0.62 +0.7 2,893,378 - OHPLBJKB_02768 0.72 +1.0 2,893,447 + OHPLBJKB_02768 0.79 +0.3 2,893,447 + OHPLBJKB_02768 0.79 +0.5 2,893,465 + OHPLBJKB_02768 0.81 -0.2 2,893,534 + OHPLBJKB_02768 0.89 +0.5 2,893,535 - OHPLBJKB_02768 0.89 +0.9 2,893,535 - OHPLBJKB_02768 0.89 +0.0 2,893,552 + -0.2 2,893,552 + -0.6 2,893,553 - -0.6 2,893,553 - +0.1 2,893,553 - -0.3 2,893,553 - -0.0 2,893,553 - -0.3 2,893,553 - -0.9 2,893,553 - -0.5 2,893,554 + -1.7 2,893,554 + +0.9 2,893,555 - -0.7 2,893,555 - -0.3 2,893,555 - -0.1 2,893,555 - -1.9 2,893,555 - -0.6
Or see this region's nucleotide sequence