Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02650

Experiment: Control_HSF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02649 and OHPLBJKB_02650 are separated by 57 nucleotidesOHPLBJKB_02650 and OHPLBJKB_02651 are separated by 541 nucleotides OHPLBJKB_02649: OHPLBJKB_02649 - Iron uptake system component EfeO, at 2,756,970 to 2,758,097 _02649 OHPLBJKB_02650: OHPLBJKB_02650 - Ferrous iron permease EfeU, at 2,758,155 to 2,758,985 _02650 OHPLBJKB_02651: OHPLBJKB_02651 - Sodium/proline symporter, at 2,759,527 to 2,761,035 _02651 Position (kb) 2758 2759Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2757.380 kb on - strand, within OHPLBJKB_02649at 2757.394 kb on + strand, within OHPLBJKB_02649at 2757.487 kb on + strand, within OHPLBJKB_02649at 2757.488 kb on - strand, within OHPLBJKB_02649at 2757.559 kb on + strand, within OHPLBJKB_02649at 2757.559 kb on + strand, within OHPLBJKB_02649at 2757.559 kb on + strand, within OHPLBJKB_02649at 2757.559 kb on + strand, within OHPLBJKB_02649at 2757.559 kb on + strand, within OHPLBJKB_02649at 2757.580 kb on + strand, within OHPLBJKB_02649at 2757.580 kb on + strand, within OHPLBJKB_02649at 2757.580 kb on + strand, within OHPLBJKB_02649at 2757.581 kb on - strand, within OHPLBJKB_02649at 2757.581 kb on - strand, within OHPLBJKB_02649at 2757.581 kb on - strand, within OHPLBJKB_02649at 2757.581 kb on - strand, within OHPLBJKB_02649at 2757.581 kb on - strand, within OHPLBJKB_02649at 2757.581 kb on - strand, within OHPLBJKB_02649at 2757.615 kb on - strand, within OHPLBJKB_02649at 2757.673 kb on + strand, within OHPLBJKB_02649at 2757.674 kb on - strand, within OHPLBJKB_02649at 2757.674 kb on - strand, within OHPLBJKB_02649at 2757.674 kb on - strand, within OHPLBJKB_02649at 2757.680 kb on + strand, within OHPLBJKB_02649at 2757.680 kb on + strand, within OHPLBJKB_02649at 2757.680 kb on + strand, within OHPLBJKB_02649at 2757.681 kb on - strand, within OHPLBJKB_02649at 2757.681 kb on - strand, within OHPLBJKB_02649at 2757.681 kb on - strand, within OHPLBJKB_02649at 2757.681 kb on - strand, within OHPLBJKB_02649at 2757.682 kb on + strand, within OHPLBJKB_02649at 2757.683 kb on - strand, within OHPLBJKB_02649at 2757.683 kb on - strand, within OHPLBJKB_02649at 2757.689 kb on + strand, within OHPLBJKB_02649at 2757.839 kb on + strand, within OHPLBJKB_02649at 2757.930 kb on - strand, within OHPLBJKB_02649at 2757.930 kb on - strand, within OHPLBJKB_02649at 2758.032 kb on - strandat 2758.032 kb on - strandat 2758.106 kb on + strandat 2758.106 kb on + strandat 2758.225 kb on + strandat 2758.226 kb on - strandat 2758.230 kb on - strandat 2758.495 kb on - strand, within OHPLBJKB_02650at 2758.495 kb on - strand, within OHPLBJKB_02650at 2758.736 kb on + strand, within OHPLBJKB_02650at 2758.736 kb on + strand, within OHPLBJKB_02650at 2758.766 kb on + strand, within OHPLBJKB_02650at 2758.766 kb on + strand, within OHPLBJKB_02650at 2758.766 kb on + strand, within OHPLBJKB_02650at 2758.907 kb on + strandat 2758.908 kb on - strandat 2758.908 kb on - strandat 2758.908 kb on - strandat 2758.912 kb on + strandat 2758.965 kb on - strandat 2759.020 kb on + strandat 2759.020 kb on + strandat 2759.021 kb on - strandat 2759.055 kb on - strandat 2759.076 kb on - strandat 2759.137 kb on + strandat 2759.138 kb on - strandat 2759.139 kb on + strandat 2759.139 kb on + strandat 2759.140 kb on - strandat 2759.140 kb on - strandat 2759.140 kb on - strandat 2759.156 kb on + strandat 2759.266 kb on - strandat 2759.275 kb on - strandat 2759.284 kb on + strandat 2759.285 kb on - strandat 2759.285 kb on - strandat 2759.320 kb on + strandat 2759.339 kb on + strandat 2759.339 kb on + strandat 2759.339 kb on + strandat 2759.339 kb on + strandat 2759.339 kb on + strandat 2759.339 kb on + strandat 2759.339 kb on + strandat 2759.340 kb on - strandat 2759.340 kb on - strandat 2759.456 kb on - strandat 2759.457 kb on + strandat 2759.528 kb on + strandat 2759.629 kb on - strandat 2759.635 kb on + strandat 2759.636 kb on - strandat 2759.636 kb on - strandat 2759.636 kb on - strandat 2759.646 kb on + strandat 2759.647 kb on - strandat 2759.679 kb on - strand, within OHPLBJKB_02651at 2759.828 kb on + strand, within OHPLBJKB_02651at 2759.829 kb on - strand, within OHPLBJKB_02651at 2759.965 kb on + strand, within OHPLBJKB_02651

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_HSF
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2,757,380 - OHPLBJKB_02649 0.36 +0.6
2,757,394 + OHPLBJKB_02649 0.38 +1.2
2,757,487 + OHPLBJKB_02649 0.46 -0.3
2,757,488 - OHPLBJKB_02649 0.46 +0.1
2,757,559 + OHPLBJKB_02649 0.52 -1.0
2,757,559 + OHPLBJKB_02649 0.52 +1.2
2,757,559 + OHPLBJKB_02649 0.52 +2.8
2,757,559 + OHPLBJKB_02649 0.52 +0.5
2,757,559 + OHPLBJKB_02649 0.52 -0.1
2,757,580 + OHPLBJKB_02649 0.54 -0.5
2,757,580 + OHPLBJKB_02649 0.54 -1.8
2,757,580 + OHPLBJKB_02649 0.54 -0.5
2,757,581 - OHPLBJKB_02649 0.54 +0.8
2,757,581 - OHPLBJKB_02649 0.54 +0.5
2,757,581 - OHPLBJKB_02649 0.54 +0.3
2,757,581 - OHPLBJKB_02649 0.54 +1.7
2,757,581 - OHPLBJKB_02649 0.54 -0.2
2,757,581 - OHPLBJKB_02649 0.54 -0.4
2,757,615 - OHPLBJKB_02649 0.57 +0.1
2,757,673 + OHPLBJKB_02649 0.62 -0.1
2,757,674 - OHPLBJKB_02649 0.62 -0.2
2,757,674 - OHPLBJKB_02649 0.62 +1.0
2,757,674 - OHPLBJKB_02649 0.62 -0.6
2,757,680 + OHPLBJKB_02649 0.63 +0.8
2,757,680 + OHPLBJKB_02649 0.63 -0.6
2,757,680 + OHPLBJKB_02649 0.63 +0.2
2,757,681 - OHPLBJKB_02649 0.63 +0.3
2,757,681 - OHPLBJKB_02649 0.63 -0.2
2,757,681 - OHPLBJKB_02649 0.63 +0.0
2,757,681 - OHPLBJKB_02649 0.63 -0.1
2,757,682 + OHPLBJKB_02649 0.63 -0.6
2,757,683 - OHPLBJKB_02649 0.63 -0.4
2,757,683 - OHPLBJKB_02649 0.63 -0.0
2,757,689 + OHPLBJKB_02649 0.64 +0.8
2,757,839 + OHPLBJKB_02649 0.77 -0.9
2,757,930 - OHPLBJKB_02649 0.85 +0.0
2,757,930 - OHPLBJKB_02649 0.85 +0.3
2,758,032 - -0.6
2,758,032 - +0.7
2,758,106 + -0.8
2,758,106 + -0.6
2,758,225 + +0.7
2,758,226 - +0.2
2,758,230 - +0.0
2,758,495 - OHPLBJKB_02650 0.41 -0.1
2,758,495 - OHPLBJKB_02650 0.41 -0.5
2,758,736 + OHPLBJKB_02650 0.70 -1.8
2,758,736 + OHPLBJKB_02650 0.70 -1.0
2,758,766 + OHPLBJKB_02650 0.74 -0.6
2,758,766 + OHPLBJKB_02650 0.74 +0.7
2,758,766 + OHPLBJKB_02650 0.74 -0.2
2,758,907 + -0.1
2,758,908 - +0.2
2,758,908 - -1.1
2,758,908 - +0.2
2,758,912 + +0.2
2,758,965 - +0.2
2,759,020 + -1.5
2,759,020 + +0.0
2,759,021 - -1.8
2,759,055 - +0.5
2,759,076 - -1.9
2,759,137 + +1.1
2,759,138 - +2.0
2,759,139 + -0.0
2,759,139 + -0.1
2,759,140 - -0.5
2,759,140 - -0.3
2,759,140 - +0.1
2,759,156 + +0.5
2,759,266 - +0.4
2,759,275 - +0.1
2,759,284 + -0.2
2,759,285 - -0.6
2,759,285 - +1.4
2,759,320 + +0.1
2,759,339 + -1.1
2,759,339 + -0.7
2,759,339 + -1.6
2,759,339 + -0.0
2,759,339 + +0.3
2,759,339 + +0.6
2,759,339 + -0.9
2,759,340 - +2.0
2,759,340 - -0.6
2,759,456 - -0.2
2,759,457 + -0.5
2,759,528 + +0.8
2,759,629 - -1.5
2,759,635 + -0.5
2,759,636 - +0.6
2,759,636 - -0.8
2,759,636 - +0.6
2,759,646 + +1.0
2,759,647 - -1.1
2,759,679 - OHPLBJKB_02651 0.10 -0.8
2,759,828 + OHPLBJKB_02651 0.20 -1.4
2,759,829 - OHPLBJKB_02651 0.20 -0.5
2,759,965 + OHPLBJKB_02651 0.29 -1.1

Or see this region's nucleotide sequence