Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02503 and OHPLBJKB_02504 are separated by 145 nucleotides OHPLBJKB_02504 and OHPLBJKB_02505 are separated by 45 nucleotides
OHPLBJKB_02503: OHPLBJKB_02503 - Na(+)/H(+) antiporter NhaB, at 2,619,488 to 2,621,029
_02503
OHPLBJKB_02504: OHPLBJKB_02504 - Disulfide bond formation protein B, at 2,621,175 to 2,621,705
_02504
OHPLBJKB_02505: OHPLBJKB_02505 - Protein UmuC, at 2,621,751 to 2,623,019
_02505
Position (kb)
2621
2622 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2620.665 kb on - strand, within OHPLBJKB_02503 at 2620.665 kb on - strand, within OHPLBJKB_02503 at 2620.721 kb on + strand, within OHPLBJKB_02503 at 2620.723 kb on + strand, within OHPLBJKB_02503 at 2620.775 kb on + strand, within OHPLBJKB_02503 at 2620.776 kb on - strand, within OHPLBJKB_02503 at 2620.799 kb on - strand, within OHPLBJKB_02503 at 2620.799 kb on - strand, within OHPLBJKB_02503 at 2620.799 kb on - strand, within OHPLBJKB_02503 at 2620.929 kb on - strand at 2620.972 kb on + strand at 2621.000 kb on - strand at 2621.047 kb on + strand at 2621.047 kb on + strand at 2621.047 kb on + strand at 2621.049 kb on + strand at 2621.049 kb on + strand at 2621.049 kb on + strand at 2621.049 kb on + strand at 2621.050 kb on - strand at 2621.050 kb on - strand at 2621.050 kb on - strand at 2621.050 kb on - strand at 2621.050 kb on - strand at 2621.050 kb on - strand at 2621.151 kb on + strand at 2621.152 kb on - strand at 2621.157 kb on + strand at 2621.174 kb on + strand at 2621.174 kb on + strand at 2621.175 kb on - strand at 2621.175 kb on - strand at 2621.175 kb on - strand at 2621.306 kb on + strand, within OHPLBJKB_02504 at 2621.307 kb on - strand, within OHPLBJKB_02504 at 2621.310 kb on + strand, within OHPLBJKB_02504 at 2621.310 kb on + strand, within OHPLBJKB_02504 at 2621.310 kb on + strand, within OHPLBJKB_02504 at 2621.385 kb on + strand, within OHPLBJKB_02504 at 2621.389 kb on + strand, within OHPLBJKB_02504 at 2621.390 kb on - strand, within OHPLBJKB_02504 at 2621.409 kb on + strand, within OHPLBJKB_02504 at 2621.409 kb on + strand, within OHPLBJKB_02504 at 2621.409 kb on + strand, within OHPLBJKB_02504 at 2621.409 kb on + strand, within OHPLBJKB_02504 at 2621.409 kb on + strand, within OHPLBJKB_02504 at 2621.410 kb on - strand, within OHPLBJKB_02504 at 2621.410 kb on - strand, within OHPLBJKB_02504 at 2621.410 kb on - strand, within OHPLBJKB_02504 at 2621.412 kb on - strand, within OHPLBJKB_02504 at 2621.435 kb on - strand, within OHPLBJKB_02504 at 2621.440 kb on - strand, within OHPLBJKB_02504 at 2621.440 kb on - strand, within OHPLBJKB_02504 at 2621.525 kb on + strand, within OHPLBJKB_02504 at 2621.526 kb on - strand, within OHPLBJKB_02504 at 2621.526 kb on - strand, within OHPLBJKB_02504 at 2621.526 kb on - strand, within OHPLBJKB_02504 at 2621.526 kb on - strand, within OHPLBJKB_02504 at 2621.746 kb on + strand at 2621.746 kb on + strand at 2621.747 kb on - strand at 2621.748 kb on + strand at 2621.748 kb on + strand at 2621.748 kb on + strand at 2621.749 kb on - strand at 2621.752 kb on + strand at 2621.767 kb on - strand at 2621.786 kb on + strand at 2621.787 kb on - strand at 2621.788 kb on + strand at 2621.851 kb on + strand at 2621.852 kb on - strand at 2621.886 kb on - strand, within OHPLBJKB_02505 at 2622.042 kb on - strand, within OHPLBJKB_02505 at 2622.057 kb on - strand, within OHPLBJKB_02505 at 2622.112 kb on + strand, within OHPLBJKB_02505 at 2622.113 kb on - strand, within OHPLBJKB_02505 at 2622.144 kb on - strand, within OHPLBJKB_02505 at 2622.211 kb on + strand, within OHPLBJKB_02505 at 2622.211 kb on + strand, within OHPLBJKB_02505 at 2622.212 kb on - strand, within OHPLBJKB_02505 at 2622.215 kb on + strand, within OHPLBJKB_02505 at 2622.278 kb on + strand, within OHPLBJKB_02505 at 2622.278 kb on + strand, within OHPLBJKB_02505 at 2622.375 kb on - strand, within OHPLBJKB_02505 at 2622.495 kb on + strand, within OHPLBJKB_02505 at 2622.496 kb on - strand, within OHPLBJKB_02505 at 2622.500 kb on + strand, within OHPLBJKB_02505 at 2622.500 kb on + strand, within OHPLBJKB_02505 at 2622.629 kb on + strand, within OHPLBJKB_02505
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 2,620,665 - OHPLBJKB_02503 0.76 -0.8 2,620,665 - OHPLBJKB_02503 0.76 +1.8 2,620,721 + OHPLBJKB_02503 0.80 -0.2 2,620,723 + OHPLBJKB_02503 0.80 -0.8 2,620,775 + OHPLBJKB_02503 0.83 -0.8 2,620,776 - OHPLBJKB_02503 0.84 -0.6 2,620,799 - OHPLBJKB_02503 0.85 +0.9 2,620,799 - OHPLBJKB_02503 0.85 -0.2 2,620,799 - OHPLBJKB_02503 0.85 +0.4 2,620,929 - -0.9 2,620,972 + -0.5 2,621,000 - -0.8 2,621,047 + +0.4 2,621,047 + -0.9 2,621,047 + -0.4 2,621,049 + -0.8 2,621,049 + +0.9 2,621,049 + -0.5 2,621,049 + +1.2 2,621,050 - -0.4 2,621,050 - -2.8 2,621,050 - +1.2 2,621,050 - -1.1 2,621,050 - -0.9 2,621,050 - -0.8 2,621,151 + +0.3 2,621,152 - -0.8 2,621,157 + -1.2 2,621,174 + +0.3 2,621,174 + +0.1 2,621,175 - -0.4 2,621,175 - -0.1 2,621,175 - -1.9 2,621,306 + OHPLBJKB_02504 0.25 -1.1 2,621,307 - OHPLBJKB_02504 0.25 -0.6 2,621,310 + OHPLBJKB_02504 0.25 -0.9 2,621,310 + OHPLBJKB_02504 0.25 -0.9 2,621,310 + OHPLBJKB_02504 0.25 -1.9 2,621,385 + OHPLBJKB_02504 0.40 -0.8 2,621,389 + OHPLBJKB_02504 0.40 -0.2 2,621,390 - OHPLBJKB_02504 0.40 -1.6 2,621,409 + OHPLBJKB_02504 0.44 -3.0 2,621,409 + OHPLBJKB_02504 0.44 -0.7 2,621,409 + OHPLBJKB_02504 0.44 +0.2 2,621,409 + OHPLBJKB_02504 0.44 +0.6 2,621,409 + OHPLBJKB_02504 0.44 -0.4 2,621,410 - OHPLBJKB_02504 0.44 +0.2 2,621,410 - OHPLBJKB_02504 0.44 +0.6 2,621,410 - OHPLBJKB_02504 0.44 +0.0 2,621,412 - OHPLBJKB_02504 0.45 -0.8 2,621,435 - OHPLBJKB_02504 0.49 -1.1 2,621,440 - OHPLBJKB_02504 0.50 +2.2 2,621,440 - OHPLBJKB_02504 0.50 -0.6 2,621,525 + OHPLBJKB_02504 0.66 -2.4 2,621,526 - OHPLBJKB_02504 0.66 +0.2 2,621,526 - OHPLBJKB_02504 0.66 -0.8 2,621,526 - OHPLBJKB_02504 0.66 -1.6 2,621,526 - OHPLBJKB_02504 0.66 +0.2 2,621,746 + -0.8 2,621,746 + -1.8 2,621,747 - -0.3 2,621,748 + +0.6 2,621,748 + -0.2 2,621,748 + +0.2 2,621,749 - -0.1 2,621,752 + +0.1 2,621,767 - +0.6 2,621,786 + -1.0 2,621,787 - -1.0 2,621,788 + -0.3 2,621,851 + -0.4 2,621,852 - -0.6 2,621,886 - OHPLBJKB_02505 0.11 +0.2 2,622,042 - OHPLBJKB_02505 0.23 +0.8 2,622,057 - OHPLBJKB_02505 0.24 -0.2 2,622,112 + OHPLBJKB_02505 0.28 -1.4 2,622,113 - OHPLBJKB_02505 0.29 -0.6 2,622,144 - OHPLBJKB_02505 0.31 +0.0 2,622,211 + OHPLBJKB_02505 0.36 +0.2 2,622,211 + OHPLBJKB_02505 0.36 -0.5 2,622,212 - OHPLBJKB_02505 0.36 -0.4 2,622,215 + OHPLBJKB_02505 0.37 -0.5 2,622,278 + OHPLBJKB_02505 0.42 -1.6 2,622,278 + OHPLBJKB_02505 0.42 -0.4 2,622,375 - OHPLBJKB_02505 0.49 -0.1 2,622,495 + OHPLBJKB_02505 0.59 -0.2 2,622,496 - OHPLBJKB_02505 0.59 +0.1 2,622,500 + OHPLBJKB_02505 0.59 -0.3 2,622,500 + OHPLBJKB_02505 0.59 -0.1 2,622,629 + OHPLBJKB_02505 0.69 -0.7
Or see this region's nucleotide sequence