Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02481 and OHPLBJKB_02482 are separated by 54 nucleotides OHPLBJKB_02482 and OHPLBJKB_02483 are separated by 277 nucleotides OHPLBJKB_02483 and OHPLBJKB_02484 are separated by 116 nucleotides
OHPLBJKB_02481: OHPLBJKB_02481 - C4-dicarboxylic acid transporter DauA, at 2,593,429 to 2,595,081
_02481
OHPLBJKB_02482: OHPLBJKB_02482 - hypothetical protein, at 2,595,136 to 2,595,414
_02482
OHPLBJKB_02483: OHPLBJKB_02483 - Peptidyl-tRNA hydrolase, at 2,595,692 to 2,596,276
_02483
OHPLBJKB_02484: OHPLBJKB_02484 - Ribosome-binding ATPase YchF, at 2,596,393 to 2,597,484
_02484
Position (kb)
2595
2596 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2594.149 kb on - strand, within OHPLBJKB_02481 at 2594.307 kb on + strand, within OHPLBJKB_02481 at 2594.365 kb on - strand, within OHPLBJKB_02481 at 2594.368 kb on - strand, within OHPLBJKB_02481 at 2594.389 kb on - strand, within OHPLBJKB_02481 at 2594.391 kb on + strand, within OHPLBJKB_02481 at 2594.583 kb on + strand, within OHPLBJKB_02481 at 2594.583 kb on + strand, within OHPLBJKB_02481 at 2594.584 kb on - strand, within OHPLBJKB_02481 at 2594.715 kb on + strand, within OHPLBJKB_02481 at 2594.733 kb on + strand, within OHPLBJKB_02481 at 2594.733 kb on + strand, within OHPLBJKB_02481 at 2594.733 kb on + strand, within OHPLBJKB_02481 at 2594.733 kb on + strand, within OHPLBJKB_02481 at 2594.733 kb on + strand, within OHPLBJKB_02481 at 2594.734 kb on - strand, within OHPLBJKB_02481 at 2594.734 kb on - strand, within OHPLBJKB_02481 at 2594.734 kb on - strand, within OHPLBJKB_02481 at 2594.759 kb on + strand, within OHPLBJKB_02481 at 2594.759 kb on + strand, within OHPLBJKB_02481 at 2594.897 kb on + strand, within OHPLBJKB_02481 at 2595.080 kb on - strand at 2595.080 kb on - strand at 2595.080 kb on - strand at 2595.084 kb on - strand at 2595.130 kb on + strand at 2595.130 kb on + strand at 2595.131 kb on - strand at 2595.131 kb on - strand at 2595.137 kb on + strand at 2595.141 kb on + strand at 2595.141 kb on + strand at 2595.141 kb on + strand at 2595.141 kb on + strand at 2595.141 kb on + strand at 2595.142 kb on - strand at 2595.142 kb on - strand at 2595.180 kb on - strand, within OHPLBJKB_02482 at 2595.272 kb on - strand, within OHPLBJKB_02482 at 2595.294 kb on - strand, within OHPLBJKB_02482 at 2595.303 kb on + strand, within OHPLBJKB_02482 at 2595.304 kb on - strand, within OHPLBJKB_02482 at 2595.306 kb on + strand, within OHPLBJKB_02482 at 2595.307 kb on - strand, within OHPLBJKB_02482 at 2595.414 kb on + strand at 2595.414 kb on + strand at 2595.414 kb on + strand at 2595.415 kb on - strand at 2595.415 kb on - strand at 2595.466 kb on - strand at 2595.466 kb on - strand at 2595.466 kb on - strand at 2595.471 kb on + strand at 2595.471 kb on + strand at 2595.472 kb on - strand at 2595.476 kb on + strand at 2595.479 kb on - strand at 2595.497 kb on + strand at 2595.498 kb on - strand at 2595.498 kb on - strand at 2595.519 kb on + strand at 2595.520 kb on - strand at 2595.520 kb on - strand at 2595.529 kb on - strand at 2595.551 kb on - strand at 2595.551 kb on - strand at 2595.598 kb on + strand at 2595.655 kb on + strand at 2595.666 kb on + strand at 2595.670 kb on + strand at 2595.670 kb on + strand at 2595.670 kb on + strand at 2595.670 kb on + strand at 2595.670 kb on + strand at 2596.223 kb on - strand at 2596.275 kb on - strand at 2596.311 kb on + strand at 2596.312 kb on - strand at 2596.313 kb on + strand at 2596.313 kb on + strand at 2596.354 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 2,594,149 - OHPLBJKB_02481 0.44 -1.4 2,594,307 + OHPLBJKB_02481 0.53 +0.2 2,594,365 - OHPLBJKB_02481 0.57 +0.1 2,594,368 - OHPLBJKB_02481 0.57 -0.1 2,594,389 - OHPLBJKB_02481 0.58 +0.6 2,594,391 + OHPLBJKB_02481 0.58 -0.1 2,594,583 + OHPLBJKB_02481 0.70 +0.7 2,594,583 + OHPLBJKB_02481 0.70 -0.6 2,594,584 - OHPLBJKB_02481 0.70 +0.6 2,594,715 + OHPLBJKB_02481 0.78 +0.1 2,594,733 + OHPLBJKB_02481 0.79 +0.7 2,594,733 + OHPLBJKB_02481 0.79 +0.7 2,594,733 + OHPLBJKB_02481 0.79 +0.9 2,594,733 + OHPLBJKB_02481 0.79 -0.0 2,594,733 + OHPLBJKB_02481 0.79 +0.4 2,594,734 - OHPLBJKB_02481 0.79 +0.7 2,594,734 - OHPLBJKB_02481 0.79 -0.8 2,594,734 - OHPLBJKB_02481 0.79 +0.2 2,594,759 + OHPLBJKB_02481 0.80 +0.1 2,594,759 + OHPLBJKB_02481 0.80 +0.5 2,594,897 + OHPLBJKB_02481 0.89 -0.1 2,595,080 - +0.6 2,595,080 - -0.4 2,595,080 - +2.6 2,595,084 - -0.2 2,595,130 + +0.0 2,595,130 + +0.4 2,595,131 - -0.5 2,595,131 - +1.2 2,595,137 + -0.8 2,595,141 + +0.4 2,595,141 + -2.4 2,595,141 + +0.6 2,595,141 + -0.6 2,595,141 + +1.0 2,595,142 - -0.2 2,595,142 - -0.1 2,595,180 - OHPLBJKB_02482 0.16 -0.4 2,595,272 - OHPLBJKB_02482 0.49 +0.1 2,595,294 - OHPLBJKB_02482 0.57 -1.5 2,595,303 + OHPLBJKB_02482 0.60 -1.4 2,595,304 - OHPLBJKB_02482 0.60 -2.5 2,595,306 + OHPLBJKB_02482 0.61 -1.4 2,595,307 - OHPLBJKB_02482 0.61 +0.6 2,595,414 + +0.9 2,595,414 + -1.4 2,595,414 + -1.1 2,595,415 - +0.2 2,595,415 - -0.3 2,595,466 - -1.1 2,595,466 - -0.0 2,595,466 - +0.4 2,595,471 + +1.1 2,595,471 + +0.6 2,595,472 - +0.9 2,595,476 + +0.2 2,595,479 - +0.0 2,595,497 + +1.0 2,595,498 - -0.6 2,595,498 - -0.5 2,595,519 + -0.8 2,595,520 - +0.2 2,595,520 - +1.2 2,595,529 - -0.1 2,595,551 - +0.6 2,595,551 - +1.2 2,595,598 + -0.3 2,595,655 + -0.2 2,595,666 + -1.0 2,595,670 + -1.1 2,595,670 + +1.2 2,595,670 + -0.1 2,595,670 + +1.4 2,595,670 + +0.9 2,596,223 - +0.2 2,596,275 - +0.3 2,596,311 + -0.4 2,596,312 - -0.6 2,596,313 + -0.1 2,596,313 + -0.0 2,596,354 + +0.9
Or see this region's nucleotide sequence