Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02473 and OHPLBJKB_02474 are separated by 3 nucleotides OHPLBJKB_02474 and OHPLBJKB_02475 overlap by 4 nucleotides OHPLBJKB_02475 and OHPLBJKB_02476 overlap by 1 nucleotides
OHPLBJKB_02473: OHPLBJKB_02473 - hypothetical protein, at 2,586,076 to 2,586,885
_02473
OHPLBJKB_02474: OHPLBJKB_02474 - Protein YchQ, at 2,586,889 to 2,587,281
_02474
OHPLBJKB_02475: OHPLBJKB_02475 - Release factor glutamine methyltransferase, at 2,587,278 to 2,588,111
_02475
OHPLBJKB_02476: OHPLBJKB_02476 - Peptide chain release factor RF1, at 2,588,111 to 2,589,193
_02476
Position (kb)
2587
2588
2589 Strain fitness (log2 ratio)
-1
0
1 at 2586.331 kb on - strand, within OHPLBJKB_02473 at 2586.361 kb on - strand, within OHPLBJKB_02473 at 2586.425 kb on - strand, within OHPLBJKB_02473 at 2586.425 kb on - strand, within OHPLBJKB_02473 at 2586.435 kb on + strand, within OHPLBJKB_02473 at 2586.435 kb on + strand, within OHPLBJKB_02473 at 2586.435 kb on + strand, within OHPLBJKB_02473 at 2586.435 kb on + strand, within OHPLBJKB_02473 at 2586.435 kb on + strand, within OHPLBJKB_02473 at 2586.435 kb on + strand, within OHPLBJKB_02473 at 2586.435 kb on + strand, within OHPLBJKB_02473 at 2586.436 kb on - strand, within OHPLBJKB_02473 at 2586.468 kb on + strand, within OHPLBJKB_02473 at 2586.571 kb on + strand, within OHPLBJKB_02473 at 2586.584 kb on - strand, within OHPLBJKB_02473 at 2586.584 kb on - strand, within OHPLBJKB_02473 at 2586.584 kb on - strand, within OHPLBJKB_02473 at 2586.650 kb on + strand, within OHPLBJKB_02473 at 2586.721 kb on + strand, within OHPLBJKB_02473 at 2586.722 kb on - strand, within OHPLBJKB_02473 at 2586.759 kb on + strand, within OHPLBJKB_02473 at 2586.782 kb on + strand, within OHPLBJKB_02473 at 2586.856 kb on - strand at 2586.858 kb on + strand at 2586.858 kb on + strand at 2586.904 kb on + strand at 2586.905 kb on - strand at 2586.935 kb on + strand, within OHPLBJKB_02474 at 2586.936 kb on - strand, within OHPLBJKB_02474 at 2586.936 kb on - strand, within OHPLBJKB_02474 at 2586.936 kb on - strand, within OHPLBJKB_02474 at 2586.991 kb on - strand, within OHPLBJKB_02474 at 2586.999 kb on - strand, within OHPLBJKB_02474 at 2587.011 kb on + strand, within OHPLBJKB_02474 at 2587.011 kb on + strand, within OHPLBJKB_02474 at 2587.011 kb on + strand, within OHPLBJKB_02474 at 2587.012 kb on - strand, within OHPLBJKB_02474 at 2587.028 kb on + strand, within OHPLBJKB_02474 at 2587.028 kb on + strand, within OHPLBJKB_02474 at 2587.029 kb on - strand, within OHPLBJKB_02474 at 2587.029 kb on - strand, within OHPLBJKB_02474 at 2587.098 kb on + strand, within OHPLBJKB_02474 at 2587.127 kb on - strand, within OHPLBJKB_02474 at 2587.210 kb on + strand, within OHPLBJKB_02474 at 2587.210 kb on + strand, within OHPLBJKB_02474 at 2587.220 kb on - strand, within OHPLBJKB_02474 at 2587.242 kb on + strand at 2587.243 kb on - strand at 2587.246 kb on - strand at 2587.246 kb on - strand at 2587.246 kb on - strand at 2587.266 kb on + strand at 2587.321 kb on + strand at 2587.348 kb on + strand at 2587.362 kb on - strand, within OHPLBJKB_02475 at 2587.455 kb on - strand, within OHPLBJKB_02475 at 2587.556 kb on - strand, within OHPLBJKB_02475 at 2587.632 kb on - strand, within OHPLBJKB_02475 at 2587.659 kb on - strand, within OHPLBJKB_02475 at 2587.689 kb on - strand, within OHPLBJKB_02475 at 2587.695 kb on + strand, within OHPLBJKB_02475 at 2588.105 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 2,586,331 - OHPLBJKB_02473 0.31 +0.3 2,586,361 - OHPLBJKB_02473 0.35 +0.9 2,586,425 - OHPLBJKB_02473 0.43 +1.1 2,586,425 - OHPLBJKB_02473 0.43 -0.0 2,586,435 + OHPLBJKB_02473 0.44 +0.6 2,586,435 + OHPLBJKB_02473 0.44 -0.5 2,586,435 + OHPLBJKB_02473 0.44 -0.2 2,586,435 + OHPLBJKB_02473 0.44 -1.1 2,586,435 + OHPLBJKB_02473 0.44 -0.8 2,586,435 + OHPLBJKB_02473 0.44 -0.4 2,586,435 + OHPLBJKB_02473 0.44 +0.2 2,586,436 - OHPLBJKB_02473 0.44 +1.2 2,586,468 + OHPLBJKB_02473 0.48 -0.8 2,586,571 + OHPLBJKB_02473 0.61 -0.8 2,586,584 - OHPLBJKB_02473 0.63 +0.1 2,586,584 - OHPLBJKB_02473 0.63 +0.8 2,586,584 - OHPLBJKB_02473 0.63 +1.0 2,586,650 + OHPLBJKB_02473 0.71 +0.4 2,586,721 + OHPLBJKB_02473 0.80 -0.4 2,586,722 - OHPLBJKB_02473 0.80 +0.2 2,586,759 + OHPLBJKB_02473 0.84 -0.6 2,586,782 + OHPLBJKB_02473 0.87 -0.8 2,586,856 - -0.7 2,586,858 + +1.6 2,586,858 + -0.8 2,586,904 + -0.9 2,586,905 - -1.5 2,586,935 + OHPLBJKB_02474 0.12 +0.2 2,586,936 - OHPLBJKB_02474 0.12 +1.0 2,586,936 - OHPLBJKB_02474 0.12 -0.4 2,586,936 - OHPLBJKB_02474 0.12 +1.1 2,586,991 - OHPLBJKB_02474 0.26 +0.5 2,586,999 - OHPLBJKB_02474 0.28 -1.1 2,587,011 + OHPLBJKB_02474 0.31 +0.2 2,587,011 + OHPLBJKB_02474 0.31 -0.9 2,587,011 + OHPLBJKB_02474 0.31 -0.2 2,587,012 - OHPLBJKB_02474 0.31 +0.2 2,587,028 + OHPLBJKB_02474 0.35 +0.4 2,587,028 + OHPLBJKB_02474 0.35 -0.8 2,587,029 - OHPLBJKB_02474 0.36 -0.6 2,587,029 - OHPLBJKB_02474 0.36 +0.8 2,587,098 + OHPLBJKB_02474 0.53 +0.2 2,587,127 - OHPLBJKB_02474 0.61 -0.9 2,587,210 + OHPLBJKB_02474 0.82 -0.4 2,587,210 + OHPLBJKB_02474 0.82 -0.1 2,587,220 - OHPLBJKB_02474 0.84 -0.6 2,587,242 + -0.0 2,587,243 - +0.2 2,587,246 - -0.1 2,587,246 - -0.7 2,587,246 - +0.2 2,587,266 + +0.2 2,587,321 + +0.6 2,587,348 + -0.4 2,587,362 - OHPLBJKB_02475 0.10 -0.8 2,587,455 - OHPLBJKB_02475 0.21 -0.5 2,587,556 - OHPLBJKB_02475 0.33 -1.4 2,587,632 - OHPLBJKB_02475 0.42 -1.4 2,587,659 - OHPLBJKB_02475 0.46 -0.4 2,587,689 - OHPLBJKB_02475 0.49 +0.2 2,587,695 + OHPLBJKB_02475 0.50 +1.2 2,588,105 - +0.3
Or see this region's nucleotide sequence