Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02363

Experiment: Control_HSF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02362 and OHPLBJKB_02363 are separated by 110 nucleotidesOHPLBJKB_02363 and OHPLBJKB_02364 are separated by 44 nucleotides OHPLBJKB_02362: OHPLBJKB_02362 - HTH-type transcriptional repressor PurR, at 2,471,232 to 2,472,230 _02362 OHPLBJKB_02363: OHPLBJKB_02363 - Outer membrane protein G, at 2,472,341 to 2,473,246 _02363 OHPLBJKB_02364: OHPLBJKB_02364 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 2,473,291 to 2,474,373 _02364 Position (kb) 2472 2473 2474Strain fitness (log2 ratio) -2 -1 0 1at 2471.345 kb on - strand, within OHPLBJKB_02362at 2471.368 kb on - strand, within OHPLBJKB_02362at 2471.527 kb on + strand, within OHPLBJKB_02362at 2471.531 kb on - strand, within OHPLBJKB_02362at 2471.845 kb on - strand, within OHPLBJKB_02362at 2471.847 kb on - strand, within OHPLBJKB_02362at 2472.423 kb on + strandat 2472.424 kb on - strandat 2472.471 kb on - strand, within OHPLBJKB_02363at 2472.476 kb on + strand, within OHPLBJKB_02363at 2472.508 kb on + strand, within OHPLBJKB_02363at 2472.529 kb on + strand, within OHPLBJKB_02363at 2472.672 kb on + strand, within OHPLBJKB_02363at 2472.673 kb on - strand, within OHPLBJKB_02363at 2472.706 kb on + strand, within OHPLBJKB_02363at 2472.706 kb on + strand, within OHPLBJKB_02363at 2472.707 kb on - strand, within OHPLBJKB_02363at 2472.708 kb on + strand, within OHPLBJKB_02363at 2472.780 kb on + strand, within OHPLBJKB_02363at 2472.903 kb on + strand, within OHPLBJKB_02363at 2472.903 kb on + strand, within OHPLBJKB_02363at 2472.904 kb on - strand, within OHPLBJKB_02363at 2472.904 kb on - strand, within OHPLBJKB_02363at 2473.013 kb on - strand, within OHPLBJKB_02363at 2473.035 kb on + strand, within OHPLBJKB_02363at 2473.039 kb on - strand, within OHPLBJKB_02363at 2473.137 kb on - strand, within OHPLBJKB_02363at 2473.689 kb on + strand, within OHPLBJKB_02364at 2473.704 kb on + strand, within OHPLBJKB_02364at 2473.707 kb on - strand, within OHPLBJKB_02364at 2473.726 kb on + strand, within OHPLBJKB_02364at 2473.727 kb on - strand, within OHPLBJKB_02364at 2473.805 kb on + strand, within OHPLBJKB_02364at 2473.805 kb on + strand, within OHPLBJKB_02364at 2473.805 kb on + strand, within OHPLBJKB_02364at 2473.806 kb on - strand, within OHPLBJKB_02364at 2473.806 kb on - strand, within OHPLBJKB_02364at 2473.806 kb on - strand, within OHPLBJKB_02364at 2473.806 kb on - strand, within OHPLBJKB_02364at 2473.806 kb on - strand, within OHPLBJKB_02364at 2473.806 kb on - strand, within OHPLBJKB_02364at 2473.806 kb on - strand, within OHPLBJKB_02364at 2473.904 kb on - strand, within OHPLBJKB_02364at 2473.984 kb on - strand, within OHPLBJKB_02364at 2473.994 kb on + strand, within OHPLBJKB_02364at 2474.112 kb on - strand, within OHPLBJKB_02364at 2474.120 kb on + strand, within OHPLBJKB_02364at 2474.121 kb on - strand, within OHPLBJKB_02364at 2474.140 kb on + strand, within OHPLBJKB_02364at 2474.140 kb on + strand, within OHPLBJKB_02364at 2474.141 kb on - strand, within OHPLBJKB_02364

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_HSF
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2,471,345 - OHPLBJKB_02362 0.11 -0.4
2,471,368 - OHPLBJKB_02362 0.14 -0.9
2,471,527 + OHPLBJKB_02362 0.30 -0.5
2,471,531 - OHPLBJKB_02362 0.30 +0.5
2,471,845 - OHPLBJKB_02362 0.61 -1.8
2,471,847 - OHPLBJKB_02362 0.62 +1.2
2,472,423 + -1.1
2,472,424 - +0.4
2,472,471 - OHPLBJKB_02363 0.14 -1.1
2,472,476 + OHPLBJKB_02363 0.15 -0.2
2,472,508 + OHPLBJKB_02363 0.18 -0.6
2,472,529 + OHPLBJKB_02363 0.21 -1.2
2,472,672 + OHPLBJKB_02363 0.37 +0.2
2,472,673 - OHPLBJKB_02363 0.37 -1.1
2,472,706 + OHPLBJKB_02363 0.40 +0.2
2,472,706 + OHPLBJKB_02363 0.40 -1.7
2,472,707 - OHPLBJKB_02363 0.40 +0.5
2,472,708 + OHPLBJKB_02363 0.41 -1.1
2,472,780 + OHPLBJKB_02363 0.48 -0.8
2,472,903 + OHPLBJKB_02363 0.62 -1.6
2,472,903 + OHPLBJKB_02363 0.62 -1.4
2,472,904 - OHPLBJKB_02363 0.62 -0.8
2,472,904 - OHPLBJKB_02363 0.62 -0.0
2,473,013 - OHPLBJKB_02363 0.74 -1.3
2,473,035 + OHPLBJKB_02363 0.77 +0.2
2,473,039 - OHPLBJKB_02363 0.77 +0.4
2,473,137 - OHPLBJKB_02363 0.88 +0.2
2,473,689 + OHPLBJKB_02364 0.37 -0.1
2,473,704 + OHPLBJKB_02364 0.38 +0.7
2,473,707 - OHPLBJKB_02364 0.38 -0.4
2,473,726 + OHPLBJKB_02364 0.40 -0.9
2,473,727 - OHPLBJKB_02364 0.40 +0.6
2,473,805 + OHPLBJKB_02364 0.47 +0.6
2,473,805 + OHPLBJKB_02364 0.47 -0.1
2,473,805 + OHPLBJKB_02364 0.47 -0.8
2,473,806 - OHPLBJKB_02364 0.48 +0.2
2,473,806 - OHPLBJKB_02364 0.48 +1.2
2,473,806 - OHPLBJKB_02364 0.48 +1.2
2,473,806 - OHPLBJKB_02364 0.48 -0.4
2,473,806 - OHPLBJKB_02364 0.48 -1.4
2,473,806 - OHPLBJKB_02364 0.48 +0.9
2,473,806 - OHPLBJKB_02364 0.48 +0.2
2,473,904 - OHPLBJKB_02364 0.57 +0.1
2,473,984 - OHPLBJKB_02364 0.64 -0.3
2,473,994 + OHPLBJKB_02364 0.65 +0.1
2,474,112 - OHPLBJKB_02364 0.76 -0.1
2,474,120 + OHPLBJKB_02364 0.77 +0.1
2,474,121 - OHPLBJKB_02364 0.77 +0.1
2,474,140 + OHPLBJKB_02364 0.78 -0.8
2,474,140 + OHPLBJKB_02364 0.78 +0.3
2,474,141 - OHPLBJKB_02364 0.78 +0.2

Or see this region's nucleotide sequence