Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02338 and OHPLBJKB_02339 are separated by 29 nucleotides OHPLBJKB_02339 and OHPLBJKB_02340 are separated by 274 nucleotides
OHPLBJKB_02338: OHPLBJKB_02338 - ATP-dependent RNA helicase DbpA, at 2,445,508 to 2,446,881
_02338
OHPLBJKB_02339: OHPLBJKB_02339 - hypothetical protein, at 2,446,911 to 2,447,084
_02339
OHPLBJKB_02340: OHPLBJKB_02340 - Zinc transport protein ZntB, at 2,447,359 to 2,448,342
_02340
Position (kb)
2446
2447
2448 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2445.960 kb on + strand, within OHPLBJKB_02338 at 2445.960 kb on + strand, within OHPLBJKB_02338 at 2445.961 kb on - strand, within OHPLBJKB_02338 at 2446.070 kb on - strand, within OHPLBJKB_02338 at 2446.091 kb on - strand, within OHPLBJKB_02338 at 2446.135 kb on - strand, within OHPLBJKB_02338 at 2446.174 kb on + strand, within OHPLBJKB_02338 at 2446.174 kb on + strand, within OHPLBJKB_02338 at 2446.174 kb on + strand, within OHPLBJKB_02338 at 2446.175 kb on - strand, within OHPLBJKB_02338 at 2446.175 kb on - strand, within OHPLBJKB_02338 at 2446.175 kb on - strand, within OHPLBJKB_02338 at 2446.221 kb on - strand, within OHPLBJKB_02338 at 2446.437 kb on + strand, within OHPLBJKB_02338 at 2446.437 kb on + strand, within OHPLBJKB_02338 at 2446.507 kb on - strand, within OHPLBJKB_02338 at 2446.582 kb on - strand, within OHPLBJKB_02338 at 2446.657 kb on + strand, within OHPLBJKB_02338 at 2446.658 kb on - strand, within OHPLBJKB_02338 at 2446.815 kb on - strand at 2446.867 kb on - strand at 2446.886 kb on + strand at 2446.886 kb on + strand at 2446.937 kb on + strand, within OHPLBJKB_02339 at 2446.937 kb on + strand, within OHPLBJKB_02339 at 2446.938 kb on - strand, within OHPLBJKB_02339 at 2447.068 kb on + strand at 2447.068 kb on + strand at 2447.072 kb on + strand at 2447.073 kb on - strand at 2447.134 kb on + strand at 2447.134 kb on + strand at 2447.135 kb on - strand at 2447.190 kb on + strand at 2447.191 kb on - strand at 2447.198 kb on - strand at 2447.214 kb on + strand at 2447.215 kb on - strand at 2447.222 kb on + strand at 2447.272 kb on + strand at 2447.273 kb on - strand at 2447.273 kb on - strand at 2447.273 kb on - strand at 2447.331 kb on - strand at 2447.414 kb on - strand at 2447.486 kb on - strand, within OHPLBJKB_02340 at 2447.538 kb on + strand, within OHPLBJKB_02340 at 2447.538 kb on + strand, within OHPLBJKB_02340 at 2447.539 kb on - strand, within OHPLBJKB_02340 at 2447.539 kb on - strand, within OHPLBJKB_02340 at 2447.539 kb on - strand, within OHPLBJKB_02340 at 2447.540 kb on + strand, within OHPLBJKB_02340 at 2447.540 kb on + strand, within OHPLBJKB_02340 at 2447.540 kb on + strand, within OHPLBJKB_02340 at 2447.541 kb on - strand, within OHPLBJKB_02340 at 2447.610 kb on + strand, within OHPLBJKB_02340 at 2447.610 kb on + strand, within OHPLBJKB_02340 at 2447.610 kb on + strand, within OHPLBJKB_02340 at 2447.611 kb on - strand, within OHPLBJKB_02340 at 2447.742 kb on + strand, within OHPLBJKB_02340 at 2447.743 kb on - strand, within OHPLBJKB_02340 at 2447.743 kb on - strand, within OHPLBJKB_02340 at 2447.744 kb on + strand, within OHPLBJKB_02340 at 2447.820 kb on + strand, within OHPLBJKB_02340 at 2447.860 kb on - strand, within OHPLBJKB_02340 at 2448.012 kb on + strand, within OHPLBJKB_02340 at 2448.012 kb on + strand, within OHPLBJKB_02340 at 2448.013 kb on - strand, within OHPLBJKB_02340 at 2448.013 kb on - strand, within OHPLBJKB_02340 at 2448.013 kb on - strand, within OHPLBJKB_02340 at 2448.013 kb on - strand, within OHPLBJKB_02340 at 2448.014 kb on + strand, within OHPLBJKB_02340 at 2448.014 kb on + strand, within OHPLBJKB_02340 at 2448.014 kb on + strand, within OHPLBJKB_02340 at 2448.014 kb on + strand, within OHPLBJKB_02340 at 2448.014 kb on + strand, within OHPLBJKB_02340 at 2448.014 kb on + strand, within OHPLBJKB_02340 at 2448.014 kb on + strand, within OHPLBJKB_02340 at 2448.014 kb on + strand, within OHPLBJKB_02340 at 2448.015 kb on - strand, within OHPLBJKB_02340 at 2448.015 kb on - strand, within OHPLBJKB_02340 at 2448.015 kb on - strand, within OHPLBJKB_02340 at 2448.015 kb on - strand, within OHPLBJKB_02340 at 2448.015 kb on - strand, within OHPLBJKB_02340 at 2448.015 kb on - strand, within OHPLBJKB_02340 at 2448.015 kb on - strand, within OHPLBJKB_02340 at 2448.015 kb on - strand, within OHPLBJKB_02340 at 2448.016 kb on + strand, within OHPLBJKB_02340 at 2448.016 kb on + strand, within OHPLBJKB_02340 at 2448.016 kb on + strand, within OHPLBJKB_02340 at 2448.016 kb on + strand, within OHPLBJKB_02340 at 2448.016 kb on + strand, within OHPLBJKB_02340 at 2448.017 kb on - strand, within OHPLBJKB_02340 at 2448.017 kb on - strand, within OHPLBJKB_02340 at 2448.017 kb on - strand, within OHPLBJKB_02340 at 2448.017 kb on - strand, within OHPLBJKB_02340 at 2448.017 kb on - strand, within OHPLBJKB_02340 at 2448.017 kb on - strand, within OHPLBJKB_02340 at 2448.066 kb on + strand, within OHPLBJKB_02340 at 2448.066 kb on + strand, within OHPLBJKB_02340 at 2448.078 kb on + strand, within OHPLBJKB_02340 at 2448.078 kb on + strand, within OHPLBJKB_02340 at 2448.078 kb on + strand, within OHPLBJKB_02340
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 2,445,960 + OHPLBJKB_02338 0.33 -0.7 2,445,960 + OHPLBJKB_02338 0.33 -0.3 2,445,961 - OHPLBJKB_02338 0.33 -0.3 2,446,070 - OHPLBJKB_02338 0.41 +0.4 2,446,091 - OHPLBJKB_02338 0.42 -0.0 2,446,135 - OHPLBJKB_02338 0.46 -1.9 2,446,174 + OHPLBJKB_02338 0.48 -0.1 2,446,174 + OHPLBJKB_02338 0.48 +0.5 2,446,174 + OHPLBJKB_02338 0.48 -1.9 2,446,175 - OHPLBJKB_02338 0.49 +0.7 2,446,175 - OHPLBJKB_02338 0.49 +2.1 2,446,175 - OHPLBJKB_02338 0.49 -1.9 2,446,221 - OHPLBJKB_02338 0.52 +0.2 2,446,437 + OHPLBJKB_02338 0.68 +0.2 2,446,437 + OHPLBJKB_02338 0.68 +1.1 2,446,507 - OHPLBJKB_02338 0.73 -0.4 2,446,582 - OHPLBJKB_02338 0.78 -1.8 2,446,657 + OHPLBJKB_02338 0.84 +0.2 2,446,658 - OHPLBJKB_02338 0.84 +0.3 2,446,815 - +0.0 2,446,867 - +0.1 2,446,886 + +0.2 2,446,886 + -0.5 2,446,937 + OHPLBJKB_02339 0.15 -0.1 2,446,937 + OHPLBJKB_02339 0.15 -0.5 2,446,938 - OHPLBJKB_02339 0.16 -1.1 2,447,068 + +1.2 2,447,068 + +0.6 2,447,072 + +0.5 2,447,073 - +0.2 2,447,134 + +0.2 2,447,134 + -0.6 2,447,135 - -1.3 2,447,190 + +0.9 2,447,191 - -0.0 2,447,198 - -1.0 2,447,214 + -0.6 2,447,215 - +0.2 2,447,222 + -1.8 2,447,272 + -0.1 2,447,273 - -1.2 2,447,273 - +0.3 2,447,273 - +1.0 2,447,331 - -1.1 2,447,414 - +0.1 2,447,486 - OHPLBJKB_02340 0.13 -0.6 2,447,538 + OHPLBJKB_02340 0.18 +0.1 2,447,538 + OHPLBJKB_02340 0.18 -1.2 2,447,539 - OHPLBJKB_02340 0.18 -0.9 2,447,539 - OHPLBJKB_02340 0.18 +0.8 2,447,539 - OHPLBJKB_02340 0.18 -0.5 2,447,540 + OHPLBJKB_02340 0.18 -1.9 2,447,540 + OHPLBJKB_02340 0.18 +0.4 2,447,540 + OHPLBJKB_02340 0.18 -0.4 2,447,541 - OHPLBJKB_02340 0.18 -0.1 2,447,610 + OHPLBJKB_02340 0.26 -0.1 2,447,610 + OHPLBJKB_02340 0.26 -1.4 2,447,610 + OHPLBJKB_02340 0.26 -0.9 2,447,611 - OHPLBJKB_02340 0.26 -1.3 2,447,742 + OHPLBJKB_02340 0.39 +0.4 2,447,743 - OHPLBJKB_02340 0.39 +1.2 2,447,743 - OHPLBJKB_02340 0.39 +0.9 2,447,744 + OHPLBJKB_02340 0.39 -0.9 2,447,820 + OHPLBJKB_02340 0.47 +0.1 2,447,860 - OHPLBJKB_02340 0.51 -1.4 2,448,012 + OHPLBJKB_02340 0.66 -0.1 2,448,012 + OHPLBJKB_02340 0.66 -1.3 2,448,013 - OHPLBJKB_02340 0.66 -0.8 2,448,013 - OHPLBJKB_02340 0.66 +0.4 2,448,013 - OHPLBJKB_02340 0.66 +0.6 2,448,013 - OHPLBJKB_02340 0.66 -0.7 2,448,014 + OHPLBJKB_02340 0.67 -1.9 2,448,014 + OHPLBJKB_02340 0.67 +0.1 2,448,014 + OHPLBJKB_02340 0.67 +1.2 2,448,014 + OHPLBJKB_02340 0.67 +0.7 2,448,014 + OHPLBJKB_02340 0.67 +0.2 2,448,014 + OHPLBJKB_02340 0.67 -0.8 2,448,014 + OHPLBJKB_02340 0.67 -0.4 2,448,014 + OHPLBJKB_02340 0.67 +1.5 2,448,015 - OHPLBJKB_02340 0.67 -0.1 2,448,015 - OHPLBJKB_02340 0.67 -0.2 2,448,015 - OHPLBJKB_02340 0.67 +1.2 2,448,015 - OHPLBJKB_02340 0.67 +0.0 2,448,015 - OHPLBJKB_02340 0.67 -0.9 2,448,015 - OHPLBJKB_02340 0.67 +0.3 2,448,015 - OHPLBJKB_02340 0.67 -1.1 2,448,015 - OHPLBJKB_02340 0.67 +0.2 2,448,016 + OHPLBJKB_02340 0.67 +0.2 2,448,016 + OHPLBJKB_02340 0.67 -0.2 2,448,016 + OHPLBJKB_02340 0.67 +0.1 2,448,016 + OHPLBJKB_02340 0.67 -0.3 2,448,016 + OHPLBJKB_02340 0.67 +0.4 2,448,017 - OHPLBJKB_02340 0.67 -0.6 2,448,017 - OHPLBJKB_02340 0.67 +0.2 2,448,017 - OHPLBJKB_02340 0.67 -0.5 2,448,017 - OHPLBJKB_02340 0.67 +0.5 2,448,017 - OHPLBJKB_02340 0.67 +0.0 2,448,017 - OHPLBJKB_02340 0.67 -0.2 2,448,066 + OHPLBJKB_02340 0.72 -0.5 2,448,066 + OHPLBJKB_02340 0.72 -1.6 2,448,078 + OHPLBJKB_02340 0.73 +0.1 2,448,078 + OHPLBJKB_02340 0.73 -0.4 2,448,078 + OHPLBJKB_02340 0.73 -0.0
Or see this region's nucleotide sequence