Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02267

Experiment: Control_HSF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02265 and OHPLBJKB_02266 overlap by 4 nucleotidesOHPLBJKB_02266 and OHPLBJKB_02267 are separated by 0 nucleotidesOHPLBJKB_02267 and OHPLBJKB_02268 are separated by 85 nucleotidesOHPLBJKB_02268 and OHPLBJKB_02269 are separated by 165 nucleotidesOHPLBJKB_02269 and OHPLBJKB_02270 are separated by 155 nucleotides OHPLBJKB_02265: OHPLBJKB_02265 - L-amino acid N-acyltransferase MnaT, at 2,362,828 to 2,363,346 _02265 OHPLBJKB_02266: OHPLBJKB_02266 - Inner membrane protein YdcZ, at 2,363,343 to 2,363,792 _02266 OHPLBJKB_02267: OHPLBJKB_02267 - putative protein YdcY, at 2,363,793 to 2,364,026 _02267 OHPLBJKB_02268: OHPLBJKB_02268 - Orphan toxin OrtT, at 2,364,112 to 2,364,285 _02268 OHPLBJKB_02269: OHPLBJKB_02269 - IS1 family transposase IS1S, at 2,364,451 to 2,364,717 _02269 OHPLBJKB_02270: OHPLBJKB_02270 - IS1 family transposase IS1A, at 2,364,873 to 2,365,148 _02270 Position (kb) 2363 2364 2365Strain fitness (log2 ratio) -1 0 1 2at 2362.809 kb on + strandat 2362.809 kb on + strandat 2362.880 kb on - strand, within OHPLBJKB_02265at 2362.897 kb on + strand, within OHPLBJKB_02265at 2362.897 kb on + strand, within OHPLBJKB_02265at 2362.897 kb on + strand, within OHPLBJKB_02265at 2362.898 kb on - strand, within OHPLBJKB_02265at 2362.898 kb on - strand, within OHPLBJKB_02265at 2362.992 kb on - strand, within OHPLBJKB_02265at 2363.020 kb on + strand, within OHPLBJKB_02265at 2363.044 kb on - strand, within OHPLBJKB_02265at 2363.084 kb on - strand, within OHPLBJKB_02265at 2363.298 kb on + strandat 2363.298 kb on + strandat 2363.298 kb on + strandat 2363.298 kb on + strandat 2363.299 kb on - strandat 2363.299 kb on - strandat 2363.299 kb on - strandat 2363.564 kb on + strand, within OHPLBJKB_02266at 2363.564 kb on + strand, within OHPLBJKB_02266at 2363.564 kb on + strand, within OHPLBJKB_02266at 2363.564 kb on + strand, within OHPLBJKB_02266at 2363.564 kb on + strand, within OHPLBJKB_02266at 2363.564 kb on + strand, within OHPLBJKB_02266at 2363.564 kb on + strand, within OHPLBJKB_02266at 2363.564 kb on + strand, within OHPLBJKB_02266at 2363.564 kb on + strand, within OHPLBJKB_02266at 2363.565 kb on - strand, within OHPLBJKB_02266at 2363.565 kb on - strand, within OHPLBJKB_02266at 2363.565 kb on - strand, within OHPLBJKB_02266at 2363.565 kb on - strand, within OHPLBJKB_02266at 2363.565 kb on - strand, within OHPLBJKB_02266at 2363.640 kb on - strand, within OHPLBJKB_02266at 2363.640 kb on - strand, within OHPLBJKB_02266at 2363.640 kb on - strand, within OHPLBJKB_02266at 2363.665 kb on + strand, within OHPLBJKB_02266at 2363.817 kb on + strand, within OHPLBJKB_02267at 2363.920 kb on - strand, within OHPLBJKB_02267at 2363.961 kb on - strand, within OHPLBJKB_02267at 2364.027 kb on - strandat 2364.073 kb on + strandat 2364.074 kb on - strandat 2364.075 kb on + strandat 2364.075 kb on + strandat 2364.075 kb on + strandat 2364.076 kb on - strandat 2364.076 kb on - strandat 2364.076 kb on - strandat 2364.076 kb on - strandat 2364.076 kb on - strandat 2364.076 kb on - strandat 2364.107 kb on - strandat 2364.181 kb on + strand, within OHPLBJKB_02268at 2364.181 kb on + strand, within OHPLBJKB_02268at 2364.182 kb on - strand, within OHPLBJKB_02268at 2364.287 kb on + strandat 2364.288 kb on - strandat 2364.325 kb on - strandat 2364.399 kb on - strandat 2364.420 kb on + strandat 2364.421 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_HSF
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2,362,809 + -0.0
2,362,809 + +1.2
2,362,880 - OHPLBJKB_02265 0.10 -1.1
2,362,897 + OHPLBJKB_02265 0.13 +0.4
2,362,897 + OHPLBJKB_02265 0.13 +0.1
2,362,897 + OHPLBJKB_02265 0.13 -0.3
2,362,898 - OHPLBJKB_02265 0.13 -0.3
2,362,898 - OHPLBJKB_02265 0.13 -0.0
2,362,992 - OHPLBJKB_02265 0.32 +0.5
2,363,020 + OHPLBJKB_02265 0.37 -0.2
2,363,044 - OHPLBJKB_02265 0.42 +0.3
2,363,084 - OHPLBJKB_02265 0.49 -0.4
2,363,298 + -0.4
2,363,298 + +0.1
2,363,298 + -0.2
2,363,298 + +0.4
2,363,299 - +1.2
2,363,299 - -0.1
2,363,299 - +0.9
2,363,564 + OHPLBJKB_02266 0.49 +0.2
2,363,564 + OHPLBJKB_02266 0.49 -0.1
2,363,564 + OHPLBJKB_02266 0.49 -0.8
2,363,564 + OHPLBJKB_02266 0.49 +1.0
2,363,564 + OHPLBJKB_02266 0.49 -0.4
2,363,564 + OHPLBJKB_02266 0.49 -1.1
2,363,564 + OHPLBJKB_02266 0.49 +0.6
2,363,564 + OHPLBJKB_02266 0.49 -0.8
2,363,564 + OHPLBJKB_02266 0.49 -0.2
2,363,565 - OHPLBJKB_02266 0.49 +0.8
2,363,565 - OHPLBJKB_02266 0.49 +0.2
2,363,565 - OHPLBJKB_02266 0.49 +0.6
2,363,565 - OHPLBJKB_02266 0.49 -0.4
2,363,565 - OHPLBJKB_02266 0.49 +1.0
2,363,640 - OHPLBJKB_02266 0.66 -0.6
2,363,640 - OHPLBJKB_02266 0.66 -0.4
2,363,640 - OHPLBJKB_02266 0.66 -0.8
2,363,665 + OHPLBJKB_02266 0.72 +1.1
2,363,817 + OHPLBJKB_02267 0.10 -0.8
2,363,920 - OHPLBJKB_02267 0.54 -0.0
2,363,961 - OHPLBJKB_02267 0.72 -1.0
2,364,027 - -0.4
2,364,073 + +1.4
2,364,074 - +1.2
2,364,075 + +0.0
2,364,075 + +0.6
2,364,075 + +0.3
2,364,076 - +2.0
2,364,076 - +0.2
2,364,076 - -0.2
2,364,076 - +1.0
2,364,076 - -0.1
2,364,076 - -1.3
2,364,107 - -0.2
2,364,181 + OHPLBJKB_02268 0.40 +0.5
2,364,181 + OHPLBJKB_02268 0.40 -1.1
2,364,182 - OHPLBJKB_02268 0.40 +1.6
2,364,287 + -0.6
2,364,288 - +0.5
2,364,325 - +0.1
2,364,399 - +0.1
2,364,420 + +0.4
2,364,421 - +1.2

Or see this region's nucleotide sequence