Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02265 and OHPLBJKB_02266 overlap by 4 nucleotides OHPLBJKB_02266 and OHPLBJKB_02267 are separated by 0 nucleotides OHPLBJKB_02267 and OHPLBJKB_02268 are separated by 85 nucleotides OHPLBJKB_02268 and OHPLBJKB_02269 are separated by 165 nucleotides OHPLBJKB_02269 and OHPLBJKB_02270 are separated by 155 nucleotides
OHPLBJKB_02265: OHPLBJKB_02265 - L-amino acid N-acyltransferase MnaT, at 2,362,828 to 2,363,346
_02265
OHPLBJKB_02266: OHPLBJKB_02266 - Inner membrane protein YdcZ, at 2,363,343 to 2,363,792
_02266
OHPLBJKB_02267: OHPLBJKB_02267 - putative protein YdcY, at 2,363,793 to 2,364,026
_02267
OHPLBJKB_02268: OHPLBJKB_02268 - Orphan toxin OrtT, at 2,364,112 to 2,364,285
_02268
OHPLBJKB_02269: OHPLBJKB_02269 - IS1 family transposase IS1S, at 2,364,451 to 2,364,717
_02269
OHPLBJKB_02270: OHPLBJKB_02270 - IS1 family transposase IS1A, at 2,364,873 to 2,365,148
_02270
Position (kb)
2363
2364
2365 Strain fitness (log2 ratio)
-1
0
1
2 at 2362.809 kb on + strand at 2362.809 kb on + strand at 2362.880 kb on - strand, within OHPLBJKB_02265 at 2362.897 kb on + strand, within OHPLBJKB_02265 at 2362.897 kb on + strand, within OHPLBJKB_02265 at 2362.897 kb on + strand, within OHPLBJKB_02265 at 2362.898 kb on - strand, within OHPLBJKB_02265 at 2362.898 kb on - strand, within OHPLBJKB_02265 at 2362.992 kb on - strand, within OHPLBJKB_02265 at 2363.020 kb on + strand, within OHPLBJKB_02265 at 2363.044 kb on - strand, within OHPLBJKB_02265 at 2363.084 kb on - strand, within OHPLBJKB_02265 at 2363.298 kb on + strand at 2363.298 kb on + strand at 2363.298 kb on + strand at 2363.298 kb on + strand at 2363.299 kb on - strand at 2363.299 kb on - strand at 2363.299 kb on - strand at 2363.564 kb on + strand, within OHPLBJKB_02266 at 2363.564 kb on + strand, within OHPLBJKB_02266 at 2363.564 kb on + strand, within OHPLBJKB_02266 at 2363.564 kb on + strand, within OHPLBJKB_02266 at 2363.564 kb on + strand, within OHPLBJKB_02266 at 2363.564 kb on + strand, within OHPLBJKB_02266 at 2363.564 kb on + strand, within OHPLBJKB_02266 at 2363.564 kb on + strand, within OHPLBJKB_02266 at 2363.564 kb on + strand, within OHPLBJKB_02266 at 2363.565 kb on - strand, within OHPLBJKB_02266 at 2363.565 kb on - strand, within OHPLBJKB_02266 at 2363.565 kb on - strand, within OHPLBJKB_02266 at 2363.565 kb on - strand, within OHPLBJKB_02266 at 2363.565 kb on - strand, within OHPLBJKB_02266 at 2363.640 kb on - strand, within OHPLBJKB_02266 at 2363.640 kb on - strand, within OHPLBJKB_02266 at 2363.640 kb on - strand, within OHPLBJKB_02266 at 2363.665 kb on + strand, within OHPLBJKB_02266 at 2363.817 kb on + strand, within OHPLBJKB_02267 at 2363.920 kb on - strand, within OHPLBJKB_02267 at 2363.961 kb on - strand, within OHPLBJKB_02267 at 2364.027 kb on - strand at 2364.073 kb on + strand at 2364.074 kb on - strand at 2364.075 kb on + strand at 2364.075 kb on + strand at 2364.075 kb on + strand at 2364.076 kb on - strand at 2364.076 kb on - strand at 2364.076 kb on - strand at 2364.076 kb on - strand at 2364.076 kb on - strand at 2364.076 kb on - strand at 2364.107 kb on - strand at 2364.181 kb on + strand, within OHPLBJKB_02268 at 2364.181 kb on + strand, within OHPLBJKB_02268 at 2364.182 kb on - strand, within OHPLBJKB_02268 at 2364.287 kb on + strand at 2364.288 kb on - strand at 2364.325 kb on - strand at 2364.399 kb on - strand at 2364.420 kb on + strand at 2364.421 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 2,362,809 + -0.0 2,362,809 + +1.2 2,362,880 - OHPLBJKB_02265 0.10 -1.1 2,362,897 + OHPLBJKB_02265 0.13 +0.4 2,362,897 + OHPLBJKB_02265 0.13 +0.1 2,362,897 + OHPLBJKB_02265 0.13 -0.3 2,362,898 - OHPLBJKB_02265 0.13 -0.3 2,362,898 - OHPLBJKB_02265 0.13 -0.0 2,362,992 - OHPLBJKB_02265 0.32 +0.5 2,363,020 + OHPLBJKB_02265 0.37 -0.2 2,363,044 - OHPLBJKB_02265 0.42 +0.3 2,363,084 - OHPLBJKB_02265 0.49 -0.4 2,363,298 + -0.4 2,363,298 + +0.1 2,363,298 + -0.2 2,363,298 + +0.4 2,363,299 - +1.2 2,363,299 - -0.1 2,363,299 - +0.9 2,363,564 + OHPLBJKB_02266 0.49 +0.2 2,363,564 + OHPLBJKB_02266 0.49 -0.1 2,363,564 + OHPLBJKB_02266 0.49 -0.8 2,363,564 + OHPLBJKB_02266 0.49 +1.0 2,363,564 + OHPLBJKB_02266 0.49 -0.4 2,363,564 + OHPLBJKB_02266 0.49 -1.1 2,363,564 + OHPLBJKB_02266 0.49 +0.6 2,363,564 + OHPLBJKB_02266 0.49 -0.8 2,363,564 + OHPLBJKB_02266 0.49 -0.2 2,363,565 - OHPLBJKB_02266 0.49 +0.8 2,363,565 - OHPLBJKB_02266 0.49 +0.2 2,363,565 - OHPLBJKB_02266 0.49 +0.6 2,363,565 - OHPLBJKB_02266 0.49 -0.4 2,363,565 - OHPLBJKB_02266 0.49 +1.0 2,363,640 - OHPLBJKB_02266 0.66 -0.6 2,363,640 - OHPLBJKB_02266 0.66 -0.4 2,363,640 - OHPLBJKB_02266 0.66 -0.8 2,363,665 + OHPLBJKB_02266 0.72 +1.1 2,363,817 + OHPLBJKB_02267 0.10 -0.8 2,363,920 - OHPLBJKB_02267 0.54 -0.0 2,363,961 - OHPLBJKB_02267 0.72 -1.0 2,364,027 - -0.4 2,364,073 + +1.4 2,364,074 - +1.2 2,364,075 + +0.0 2,364,075 + +0.6 2,364,075 + +0.3 2,364,076 - +2.0 2,364,076 - +0.2 2,364,076 - -0.2 2,364,076 - +1.0 2,364,076 - -0.1 2,364,076 - -1.3 2,364,107 - -0.2 2,364,181 + OHPLBJKB_02268 0.40 +0.5 2,364,181 + OHPLBJKB_02268 0.40 -1.1 2,364,182 - OHPLBJKB_02268 0.40 +1.6 2,364,287 + -0.6 2,364,288 - +0.5 2,364,325 - +0.1 2,364,399 - +0.1 2,364,420 + +0.4 2,364,421 - +1.2
Or see this region's nucleotide sequence