Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02223 and OHPLBJKB_02224 are separated by 362 nucleotides OHPLBJKB_02224 and OHPLBJKB_02225 are separated by 155 nucleotides
OHPLBJKB_02223: OHPLBJKB_02223 - hypothetical protein, at 2,310,631 to 2,313,411
_02223
OHPLBJKB_02224: OHPLBJKB_02224 - Glutamate decarboxylase beta, at 2,313,774 to 2,315,174
_02224
OHPLBJKB_02225: OHPLBJKB_02225 - putative glutamate/gamma-aminobutyrate antiporter, at 2,315,330 to 2,316,865
_02225
Position (kb)
2313
2314
2315
2316 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2312.782 kb on + strand, within OHPLBJKB_02223 at 2312.786 kb on + strand, within OHPLBJKB_02223 at 2312.787 kb on - strand, within OHPLBJKB_02223 at 2312.787 kb on - strand, within OHPLBJKB_02223 at 2312.867 kb on + strand, within OHPLBJKB_02223 at 2312.867 kb on + strand, within OHPLBJKB_02223 at 2312.868 kb on - strand, within OHPLBJKB_02223 at 2312.868 kb on - strand, within OHPLBJKB_02223 at 2312.967 kb on + strand, within OHPLBJKB_02223 at 2312.997 kb on + strand, within OHPLBJKB_02223 at 2312.998 kb on - strand, within OHPLBJKB_02223 at 2313.026 kb on - strand, within OHPLBJKB_02223 at 2313.026 kb on - strand, within OHPLBJKB_02223 at 2313.091 kb on - strand, within OHPLBJKB_02223 at 2313.245 kb on + strand at 2313.265 kb on - strand at 2313.278 kb on - strand at 2313.381 kb on + strand at 2313.381 kb on + strand at 2313.716 kb on + strand at 2313.923 kb on - strand, within OHPLBJKB_02224 at 2314.951 kb on - strand, within OHPLBJKB_02224 at 2315.261 kb on - strand at 2315.326 kb on + strand at 2315.327 kb on - strand at 2315.329 kb on + strand at 2315.329 kb on + strand at 2315.330 kb on - strand at 2315.335 kb on + strand at 2315.335 kb on + strand at 2315.354 kb on - strand at 2315.359 kb on + strand at 2315.373 kb on + strand at 2315.373 kb on + strand at 2315.374 kb on - strand at 2315.374 kb on - strand at 2315.407 kb on - strand at 2315.418 kb on - strand at 2315.418 kb on - strand at 2315.469 kb on + strand at 2315.485 kb on - strand, within OHPLBJKB_02225 at 2315.491 kb on + strand, within OHPLBJKB_02225 at 2315.492 kb on - strand, within OHPLBJKB_02225 at 2315.572 kb on + strand, within OHPLBJKB_02225 at 2315.572 kb on + strand, within OHPLBJKB_02225 at 2315.573 kb on - strand, within OHPLBJKB_02225 at 2315.652 kb on - strand, within OHPLBJKB_02225 at 2315.675 kb on + strand, within OHPLBJKB_02225 at 2315.676 kb on - strand, within OHPLBJKB_02225 at 2315.723 kb on - strand, within OHPLBJKB_02225 at 2315.723 kb on - strand, within OHPLBJKB_02225 at 2315.723 kb on - strand, within OHPLBJKB_02225 at 2315.780 kb on + strand, within OHPLBJKB_02225 at 2315.836 kb on + strand, within OHPLBJKB_02225 at 2315.836 kb on + strand, within OHPLBJKB_02225 at 2315.837 kb on - strand, within OHPLBJKB_02225 at 2315.837 kb on - strand, within OHPLBJKB_02225 at 2315.862 kb on - strand, within OHPLBJKB_02225 at 2315.946 kb on + strand, within OHPLBJKB_02225 at 2315.946 kb on + strand, within OHPLBJKB_02225 at 2315.969 kb on + strand, within OHPLBJKB_02225 at 2315.969 kb on + strand, within OHPLBJKB_02225 at 2315.970 kb on - strand, within OHPLBJKB_02225 at 2315.970 kb on - strand, within OHPLBJKB_02225 at 2315.970 kb on - strand, within OHPLBJKB_02225 at 2315.970 kb on - strand, within OHPLBJKB_02225 at 2315.970 kb on - strand, within OHPLBJKB_02225 at 2315.971 kb on + strand, within OHPLBJKB_02225 at 2315.971 kb on + strand, within OHPLBJKB_02225 at 2315.972 kb on - strand, within OHPLBJKB_02225 at 2315.972 kb on - strand, within OHPLBJKB_02225 at 2315.979 kb on + strand, within OHPLBJKB_02225 at 2315.980 kb on - strand, within OHPLBJKB_02225 at 2316.040 kb on + strand, within OHPLBJKB_02225 at 2316.040 kb on + strand, within OHPLBJKB_02225 at 2316.041 kb on - strand, within OHPLBJKB_02225 at 2316.045 kb on + strand, within OHPLBJKB_02225 at 2316.073 kb on - strand, within OHPLBJKB_02225 at 2316.094 kb on + strand, within OHPLBJKB_02225 at 2316.154 kb on + strand, within OHPLBJKB_02225 at 2316.155 kb on - strand, within OHPLBJKB_02225
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 2,312,782 + OHPLBJKB_02223 0.77 -0.5 2,312,786 + OHPLBJKB_02223 0.77 -0.0 2,312,787 - OHPLBJKB_02223 0.78 +1.8 2,312,787 - OHPLBJKB_02223 0.78 -0.2 2,312,867 + OHPLBJKB_02223 0.80 +0.2 2,312,867 + OHPLBJKB_02223 0.80 -1.0 2,312,868 - OHPLBJKB_02223 0.80 +0.3 2,312,868 - OHPLBJKB_02223 0.80 +0.2 2,312,967 + OHPLBJKB_02223 0.84 -0.4 2,312,997 + OHPLBJKB_02223 0.85 -1.2 2,312,998 - OHPLBJKB_02223 0.85 +0.5 2,313,026 - OHPLBJKB_02223 0.86 -0.3 2,313,026 - OHPLBJKB_02223 0.86 +2.8 2,313,091 - OHPLBJKB_02223 0.88 -0.9 2,313,245 + -1.1 2,313,265 - -2.0 2,313,278 - -0.1 2,313,381 + -0.4 2,313,381 + +0.2 2,313,716 + +0.7 2,313,923 - OHPLBJKB_02224 0.11 -1.8 2,314,951 - OHPLBJKB_02224 0.84 +0.1 2,315,261 - -0.1 2,315,326 + +1.6 2,315,327 - -0.5 2,315,329 + -1.3 2,315,329 + +0.9 2,315,330 - +0.0 2,315,335 + +0.2 2,315,335 + +0.4 2,315,354 - -0.1 2,315,359 + -0.3 2,315,373 + +0.2 2,315,373 + +0.2 2,315,374 - -0.0 2,315,374 - -1.7 2,315,407 - -2.2 2,315,418 - -0.2 2,315,418 - -0.4 2,315,469 + +1.2 2,315,485 - OHPLBJKB_02225 0.10 -2.2 2,315,491 + OHPLBJKB_02225 0.10 -0.2 2,315,492 - OHPLBJKB_02225 0.11 +0.8 2,315,572 + OHPLBJKB_02225 0.16 +1.5 2,315,572 + OHPLBJKB_02225 0.16 -2.2 2,315,573 - OHPLBJKB_02225 0.16 +0.5 2,315,652 - OHPLBJKB_02225 0.21 +1.2 2,315,675 + OHPLBJKB_02225 0.22 -0.4 2,315,676 - OHPLBJKB_02225 0.23 -0.4 2,315,723 - OHPLBJKB_02225 0.26 +1.6 2,315,723 - OHPLBJKB_02225 0.26 -0.1 2,315,723 - OHPLBJKB_02225 0.26 -0.3 2,315,780 + OHPLBJKB_02225 0.29 +0.3 2,315,836 + OHPLBJKB_02225 0.33 +0.8 2,315,836 + OHPLBJKB_02225 0.33 +0.8 2,315,837 - OHPLBJKB_02225 0.33 +0.2 2,315,837 - OHPLBJKB_02225 0.33 +0.2 2,315,862 - OHPLBJKB_02225 0.35 +0.6 2,315,946 + OHPLBJKB_02225 0.40 +0.5 2,315,946 + OHPLBJKB_02225 0.40 +0.6 2,315,969 + OHPLBJKB_02225 0.42 -1.4 2,315,969 + OHPLBJKB_02225 0.42 -0.4 2,315,970 - OHPLBJKB_02225 0.42 -1.4 2,315,970 - OHPLBJKB_02225 0.42 +0.1 2,315,970 - OHPLBJKB_02225 0.42 +0.4 2,315,970 - OHPLBJKB_02225 0.42 +0.0 2,315,970 - OHPLBJKB_02225 0.42 +0.2 2,315,971 + OHPLBJKB_02225 0.42 +0.2 2,315,971 + OHPLBJKB_02225 0.42 +1.2 2,315,972 - OHPLBJKB_02225 0.42 -0.2 2,315,972 - OHPLBJKB_02225 0.42 +0.6 2,315,979 + OHPLBJKB_02225 0.42 +2.0 2,315,980 - OHPLBJKB_02225 0.42 -0.5 2,316,040 + OHPLBJKB_02225 0.46 +0.1 2,316,040 + OHPLBJKB_02225 0.46 -0.4 2,316,041 - OHPLBJKB_02225 0.46 -0.3 2,316,045 + OHPLBJKB_02225 0.47 +0.2 2,316,073 - OHPLBJKB_02225 0.48 +1.2 2,316,094 + OHPLBJKB_02225 0.50 +1.8 2,316,154 + OHPLBJKB_02225 0.54 -1.2 2,316,155 - OHPLBJKB_02225 0.54 -0.8
Or see this region's nucleotide sequence