Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02001 and OHPLBJKB_02002 are separated by 203 nucleotides OHPLBJKB_02002 and OHPLBJKB_02003 are separated by 288 nucleotides OHPLBJKB_02003 and OHPLBJKB_02004 are separated by 3 nucleotides
OHPLBJKB_02001: OHPLBJKB_02001 - Catalase HPII, at 2,077,696 to 2,079,957
_02001
OHPLBJKB_02002: OHPLBJKB_02002 - Cell division activator CedA, at 2,080,161 to 2,080,403
_02002
OHPLBJKB_02003: OHPLBJKB_02003 - hypothetical protein, at 2,080,692 to 2,081,495
_02003
OHPLBJKB_02004: OHPLBJKB_02004 - L-cystine uptake protein TcyP, at 2,081,499 to 2,082,890
_02004
Position (kb)
2080
2081
2082 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2079.746 kb on - strand at 2079.762 kb on + strand at 2079.780 kb on + strand at 2079.977 kb on + strand at 2079.978 kb on - strand at 2080.016 kb on + strand at 2080.016 kb on + strand at 2080.017 kb on - strand at 2080.020 kb on + strand at 2080.020 kb on + strand at 2080.020 kb on + strand at 2080.021 kb on - strand at 2080.021 kb on - strand at 2080.021 kb on - strand at 2080.021 kb on - strand at 2080.021 kb on - strand at 2080.023 kb on - strand at 2080.053 kb on + strand at 2080.077 kb on + strand at 2080.095 kb on + strand at 2080.096 kb on - strand at 2080.196 kb on + strand, within OHPLBJKB_02002 at 2080.200 kb on - strand, within OHPLBJKB_02002 at 2080.200 kb on - strand, within OHPLBJKB_02002 at 2080.203 kb on + strand, within OHPLBJKB_02002 at 2080.203 kb on + strand, within OHPLBJKB_02002 at 2080.203 kb on + strand, within OHPLBJKB_02002 at 2080.203 kb on + strand, within OHPLBJKB_02002 at 2080.204 kb on - strand, within OHPLBJKB_02002 at 2080.204 kb on - strand, within OHPLBJKB_02002 at 2080.204 kb on - strand, within OHPLBJKB_02002 at 2080.204 kb on - strand, within OHPLBJKB_02002 at 2080.204 kb on - strand, within OHPLBJKB_02002 at 2080.204 kb on - strand, within OHPLBJKB_02002 at 2080.287 kb on + strand, within OHPLBJKB_02002 at 2080.287 kb on + strand, within OHPLBJKB_02002 at 2080.288 kb on - strand, within OHPLBJKB_02002 at 2080.288 kb on - strand, within OHPLBJKB_02002 at 2080.337 kb on + strand, within OHPLBJKB_02002 at 2080.435 kb on + strand at 2080.435 kb on + strand at 2080.435 kb on + strand at 2080.436 kb on - strand at 2080.454 kb on + strand at 2080.466 kb on - strand at 2080.631 kb on - strand at 2080.919 kb on + strand, within OHPLBJKB_02003 at 2080.932 kb on + strand, within OHPLBJKB_02003 at 2080.933 kb on - strand, within OHPLBJKB_02003 at 2081.279 kb on + strand, within OHPLBJKB_02003 at 2081.408 kb on + strand, within OHPLBJKB_02003 at 2081.470 kb on + strand at 2081.494 kb on - strand at 2081.650 kb on - strand, within OHPLBJKB_02004 at 2081.978 kb on + strand, within OHPLBJKB_02004 at 2082.039 kb on - strand, within OHPLBJKB_02004 at 2082.071 kb on + strand, within OHPLBJKB_02004 at 2082.071 kb on + strand, within OHPLBJKB_02004 at 2082.072 kb on - strand, within OHPLBJKB_02004 at 2082.423 kb on - strand, within OHPLBJKB_02004 at 2082.430 kb on + strand, within OHPLBJKB_02004 at 2082.430 kb on + strand, within OHPLBJKB_02004 at 2082.430 kb on + strand, within OHPLBJKB_02004 at 2082.430 kb on + strand, within OHPLBJKB_02004 at 2082.430 kb on + strand, within OHPLBJKB_02004 at 2082.430 kb on + strand, within OHPLBJKB_02004 at 2082.430 kb on + strand, within OHPLBJKB_02004 at 2082.430 kb on + strand, within OHPLBJKB_02004 at 2082.430 kb on + strand, within OHPLBJKB_02004 at 2082.430 kb on + strand, within OHPLBJKB_02004 at 2082.430 kb on + strand, within OHPLBJKB_02004 at 2082.430 kb on + strand, within OHPLBJKB_02004 at 2082.431 kb on - strand, within OHPLBJKB_02004 at 2082.431 kb on - strand, within OHPLBJKB_02004 at 2082.431 kb on - strand, within OHPLBJKB_02004 at 2082.431 kb on - strand, within OHPLBJKB_02004 at 2082.431 kb on - strand, within OHPLBJKB_02004 at 2082.431 kb on - strand, within OHPLBJKB_02004 at 2082.431 kb on - strand, within OHPLBJKB_02004 at 2082.431 kb on - strand, within OHPLBJKB_02004 at 2082.431 kb on - strand, within OHPLBJKB_02004 at 2082.431 kb on - strand, within OHPLBJKB_02004 at 2082.431 kb on - strand, within OHPLBJKB_02004 at 2082.435 kb on - strand, within OHPLBJKB_02004
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 2,079,746 - -0.6 2,079,762 + +0.1 2,079,780 + -1.5 2,079,977 + +0.8 2,079,978 - +1.5 2,080,016 + -0.2 2,080,016 + -0.0 2,080,017 - +1.8 2,080,020 + +2.0 2,080,020 + -0.2 2,080,020 + +1.2 2,080,021 - -0.0 2,080,021 - +1.8 2,080,021 - -0.2 2,080,021 - +2.4 2,080,021 - -0.4 2,080,023 - -0.7 2,080,053 + +0.1 2,080,077 + -0.7 2,080,095 + +0.2 2,080,096 - +0.5 2,080,196 + OHPLBJKB_02002 0.14 -0.7 2,080,200 - OHPLBJKB_02002 0.16 -0.8 2,080,200 - OHPLBJKB_02002 0.16 +0.8 2,080,203 + OHPLBJKB_02002 0.17 +0.8 2,080,203 + OHPLBJKB_02002 0.17 +1.0 2,080,203 + OHPLBJKB_02002 0.17 +0.4 2,080,203 + OHPLBJKB_02002 0.17 -2.1 2,080,204 - OHPLBJKB_02002 0.18 -1.8 2,080,204 - OHPLBJKB_02002 0.18 +0.9 2,080,204 - OHPLBJKB_02002 0.18 +0.1 2,080,204 - OHPLBJKB_02002 0.18 -1.2 2,080,204 - OHPLBJKB_02002 0.18 +0.6 2,080,204 - OHPLBJKB_02002 0.18 -0.1 2,080,287 + OHPLBJKB_02002 0.52 -0.8 2,080,287 + OHPLBJKB_02002 0.52 -0.9 2,080,288 - OHPLBJKB_02002 0.52 +0.7 2,080,288 - OHPLBJKB_02002 0.52 +0.2 2,080,337 + OHPLBJKB_02002 0.72 -1.0 2,080,435 + -0.9 2,080,435 + +0.9 2,080,435 + -0.4 2,080,436 - -0.2 2,080,454 + +0.0 2,080,466 - +0.1 2,080,631 - -0.2 2,080,919 + OHPLBJKB_02003 0.28 -0.2 2,080,932 + OHPLBJKB_02003 0.30 -0.3 2,080,933 - OHPLBJKB_02003 0.30 -0.8 2,081,279 + OHPLBJKB_02003 0.73 +0.8 2,081,408 + OHPLBJKB_02003 0.89 -1.6 2,081,470 + -0.1 2,081,494 - -1.0 2,081,650 - OHPLBJKB_02004 0.11 -0.0 2,081,978 + OHPLBJKB_02004 0.34 +1.2 2,082,039 - OHPLBJKB_02004 0.39 +1.1 2,082,071 + OHPLBJKB_02004 0.41 +1.5 2,082,071 + OHPLBJKB_02004 0.41 +1.2 2,082,072 - OHPLBJKB_02004 0.41 +0.7 2,082,423 - OHPLBJKB_02004 0.66 -0.2 2,082,430 + OHPLBJKB_02004 0.67 +2.0 2,082,430 + OHPLBJKB_02004 0.67 +0.1 2,082,430 + OHPLBJKB_02004 0.67 -0.3 2,082,430 + OHPLBJKB_02004 0.67 +2.1 2,082,430 + OHPLBJKB_02004 0.67 -1.1 2,082,430 + OHPLBJKB_02004 0.67 +0.8 2,082,430 + OHPLBJKB_02004 0.67 -0.2 2,082,430 + OHPLBJKB_02004 0.67 +0.2 2,082,430 + OHPLBJKB_02004 0.67 +0.5 2,082,430 + OHPLBJKB_02004 0.67 -0.9 2,082,430 + OHPLBJKB_02004 0.67 -1.4 2,082,430 + OHPLBJKB_02004 0.67 +0.0 2,082,431 - OHPLBJKB_02004 0.67 -1.3 2,082,431 - OHPLBJKB_02004 0.67 +0.4 2,082,431 - OHPLBJKB_02004 0.67 +0.0 2,082,431 - OHPLBJKB_02004 0.67 -1.3 2,082,431 - OHPLBJKB_02004 0.67 +0.7 2,082,431 - OHPLBJKB_02004 0.67 -0.4 2,082,431 - OHPLBJKB_02004 0.67 +0.4 2,082,431 - OHPLBJKB_02004 0.67 -0.7 2,082,431 - OHPLBJKB_02004 0.67 -0.6 2,082,431 - OHPLBJKB_02004 0.67 -0.0 2,082,431 - OHPLBJKB_02004 0.67 +0.2 2,082,435 - OHPLBJKB_02004 0.67 +0.2
Or see this region's nucleotide sequence