Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01723 and OHPLBJKB_01724 are separated by 100 nucleotides OHPLBJKB_01724 and OHPLBJKB_01725 are separated by 452 nucleotides OHPLBJKB_01725 and OHPLBJKB_01726 are separated by 342 nucleotides
OHPLBJKB_01723: OHPLBJKB_01723 - putative FMN/FAD exporter YeeO, at 1,812,366 to 1,813,820
_01723
OHPLBJKB_01724: OHPLBJKB_01724 - tRNA-Asn, at 1,813,921 to 1,813,996
_01724
OHPLBJKB_01725: OHPLBJKB_01725 - putative transcriptional regulatory protein YeeN, at 1,814,449 to 1,815,165
_01725
OHPLBJKB_01726: OHPLBJKB_01726 - AMP nucleosidase, at 1,815,508 to 1,816,962
_01726
Position (kb)
1814
1815
1816 Strain fitness (log2 ratio)
-1
0
1 at 1813.514 kb on - strand, within OHPLBJKB_01723 at 1813.522 kb on + strand, within OHPLBJKB_01723 at 1813.522 kb on + strand, within OHPLBJKB_01723 at 1813.526 kb on + strand, within OHPLBJKB_01723 at 1813.526 kb on + strand, within OHPLBJKB_01723 at 1813.526 kb on + strand, within OHPLBJKB_01723 at 1813.527 kb on - strand, within OHPLBJKB_01723 at 1813.533 kb on - strand, within OHPLBJKB_01723 at 1813.569 kb on - strand, within OHPLBJKB_01723 at 1813.636 kb on + strand, within OHPLBJKB_01723 at 1813.637 kb on - strand, within OHPLBJKB_01723 at 1813.637 kb on - strand, within OHPLBJKB_01723 at 1813.731 kb on + strand at 1814.019 kb on + strand at 1814.019 kb on + strand at 1814.199 kb on - strand at 1814.199 kb on - strand at 1814.199 kb on - strand at 1814.199 kb on - strand at 1814.271 kb on + strand at 1814.271 kb on + strand at 1814.272 kb on - strand at 1814.668 kb on - strand, within OHPLBJKB_01725 at 1814.780 kb on + strand, within OHPLBJKB_01725 at 1814.851 kb on - strand, within OHPLBJKB_01725 at 1814.915 kb on + strand, within OHPLBJKB_01725 at 1814.915 kb on + strand, within OHPLBJKB_01725 at 1815.156 kb on + strand at 1815.197 kb on + strand at 1815.234 kb on + strand at 1815.343 kb on + strand at 1815.467 kb on - strand at 1815.619 kb on - strand at 1815.629 kb on + strand at 1815.694 kb on + strand, within OHPLBJKB_01726 at 1815.694 kb on + strand, within OHPLBJKB_01726 at 1815.695 kb on - strand, within OHPLBJKB_01726 at 1815.705 kb on - strand, within OHPLBJKB_01726 at 1815.775 kb on + strand, within OHPLBJKB_01726 at 1815.803 kb on + strand, within OHPLBJKB_01726 at 1815.809 kb on - strand, within OHPLBJKB_01726 at 1815.843 kb on + strand, within OHPLBJKB_01726 at 1815.843 kb on + strand, within OHPLBJKB_01726 at 1815.844 kb on - strand, within OHPLBJKB_01726 at 1815.844 kb on - strand, within OHPLBJKB_01726 at 1815.844 kb on - strand, within OHPLBJKB_01726 at 1815.849 kb on + strand, within OHPLBJKB_01726 at 1815.850 kb on - strand, within OHPLBJKB_01726 at 1815.850 kb on - strand, within OHPLBJKB_01726 at 1815.942 kb on + strand, within OHPLBJKB_01726 at 1815.992 kb on + strand, within OHPLBJKB_01726 at 1815.993 kb on - strand, within OHPLBJKB_01726 at 1815.993 kb on - strand, within OHPLBJKB_01726 at 1816.006 kb on + strand, within OHPLBJKB_01726 at 1816.007 kb on - strand, within OHPLBJKB_01726 at 1816.007 kb on - strand, within OHPLBJKB_01726 at 1816.007 kb on - strand, within OHPLBJKB_01726 at 1816.010 kb on + strand, within OHPLBJKB_01726 at 1816.010 kb on + strand, within OHPLBJKB_01726 at 1816.010 kb on + strand, within OHPLBJKB_01726 at 1816.011 kb on - strand, within OHPLBJKB_01726 at 1816.036 kb on + strand, within OHPLBJKB_01726 at 1816.036 kb on + strand, within OHPLBJKB_01726 at 1816.078 kb on + strand, within OHPLBJKB_01726 at 1816.108 kb on - strand, within OHPLBJKB_01726 at 1816.131 kb on + strand, within OHPLBJKB_01726 at 1816.143 kb on + strand, within OHPLBJKB_01726
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 1,813,514 - OHPLBJKB_01723 0.79 -0.8 1,813,522 + OHPLBJKB_01723 0.79 +0.4 1,813,522 + OHPLBJKB_01723 0.79 -0.1 1,813,526 + OHPLBJKB_01723 0.80 +0.1 1,813,526 + OHPLBJKB_01723 0.80 +0.4 1,813,526 + OHPLBJKB_01723 0.80 +0.6 1,813,527 - OHPLBJKB_01723 0.80 +0.1 1,813,533 - OHPLBJKB_01723 0.80 -0.8 1,813,569 - OHPLBJKB_01723 0.83 +0.2 1,813,636 + OHPLBJKB_01723 0.87 -0.8 1,813,637 - OHPLBJKB_01723 0.87 -0.6 1,813,637 - OHPLBJKB_01723 0.87 -1.4 1,813,731 + +1.2 1,814,019 + -1.0 1,814,019 + +0.1 1,814,199 - -0.7 1,814,199 - -0.0 1,814,199 - -0.2 1,814,199 - -1.1 1,814,271 + +0.0 1,814,271 + -0.3 1,814,272 - -0.5 1,814,668 - OHPLBJKB_01725 0.31 -1.0 1,814,780 + OHPLBJKB_01725 0.46 +1.0 1,814,851 - OHPLBJKB_01725 0.56 -0.3 1,814,915 + OHPLBJKB_01725 0.65 +0.2 1,814,915 + OHPLBJKB_01725 0.65 -0.8 1,815,156 + +0.4 1,815,197 + -0.9 1,815,234 + +0.6 1,815,343 + -0.0 1,815,467 - -0.6 1,815,619 - +0.0 1,815,629 + +0.2 1,815,694 + OHPLBJKB_01726 0.13 +0.5 1,815,694 + OHPLBJKB_01726 0.13 -0.1 1,815,695 - OHPLBJKB_01726 0.13 -0.1 1,815,705 - OHPLBJKB_01726 0.14 +0.1 1,815,775 + OHPLBJKB_01726 0.18 +1.2 1,815,803 + OHPLBJKB_01726 0.20 -0.2 1,815,809 - OHPLBJKB_01726 0.21 +0.2 1,815,843 + OHPLBJKB_01726 0.23 +0.1 1,815,843 + OHPLBJKB_01726 0.23 +0.4 1,815,844 - OHPLBJKB_01726 0.23 +1.2 1,815,844 - OHPLBJKB_01726 0.23 -1.4 1,815,844 - OHPLBJKB_01726 0.23 -0.8 1,815,849 + OHPLBJKB_01726 0.23 -0.5 1,815,850 - OHPLBJKB_01726 0.24 +1.2 1,815,850 - OHPLBJKB_01726 0.24 +0.8 1,815,942 + OHPLBJKB_01726 0.30 -0.4 1,815,992 + OHPLBJKB_01726 0.33 -1.6 1,815,993 - OHPLBJKB_01726 0.33 +0.4 1,815,993 - OHPLBJKB_01726 0.33 +0.5 1,816,006 + OHPLBJKB_01726 0.34 +0.7 1,816,007 - OHPLBJKB_01726 0.34 -0.6 1,816,007 - OHPLBJKB_01726 0.34 -0.1 1,816,007 - OHPLBJKB_01726 0.34 -0.1 1,816,010 + OHPLBJKB_01726 0.35 -1.6 1,816,010 + OHPLBJKB_01726 0.35 -0.7 1,816,010 + OHPLBJKB_01726 0.35 -1.4 1,816,011 - OHPLBJKB_01726 0.35 -1.6 1,816,036 + OHPLBJKB_01726 0.36 -0.1 1,816,036 + OHPLBJKB_01726 0.36 +0.5 1,816,078 + OHPLBJKB_01726 0.39 +0.2 1,816,108 - OHPLBJKB_01726 0.41 -0.2 1,816,131 + OHPLBJKB_01726 0.43 +0.9 1,816,143 + OHPLBJKB_01726 0.44 +0.3
Or see this region's nucleotide sequence