Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01648 and OHPLBJKB_01649 are separated by 143 nucleotides OHPLBJKB_01649 and OHPLBJKB_01650 are separated by 1 nucleotides OHPLBJKB_01650 and OHPLBJKB_01651 are separated by 14 nucleotides
OHPLBJKB_01648: OHPLBJKB_01648 - hypothetical protein, at 1,732,692 to 1,734,125
_01648
OHPLBJKB_01649: OHPLBJKB_01649 - hypothetical protein, at 1,734,269 to 1,735,405
_01649
OHPLBJKB_01650: OHPLBJKB_01650 - putative low molecular weight protein-tyrosine-phosphatase AmsI, at 1,735,407 to 1,735,844
_01650
OHPLBJKB_01651: OHPLBJKB_01651 - Putative tyrosine-protein kinase in cps region, at 1,735,859 to 1,738,027
_01651
Position (kb)
1734
1735
1736 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1733.373 kb on + strand, within OHPLBJKB_01648 at 1733.375 kb on + strand, within OHPLBJKB_01648 at 1733.376 kb on - strand, within OHPLBJKB_01648 at 1733.438 kb on - strand, within OHPLBJKB_01648 at 1733.443 kb on + strand, within OHPLBJKB_01648 at 1733.443 kb on + strand, within OHPLBJKB_01648 at 1733.460 kb on - strand, within OHPLBJKB_01648 at 1733.516 kb on + strand, within OHPLBJKB_01648 at 1733.579 kb on + strand, within OHPLBJKB_01648 at 1733.579 kb on + strand, within OHPLBJKB_01648 at 1733.585 kb on + strand, within OHPLBJKB_01648 at 1733.586 kb on - strand, within OHPLBJKB_01648 at 1733.622 kb on + strand, within OHPLBJKB_01648 at 1733.659 kb on + strand, within OHPLBJKB_01648 at 1733.659 kb on + strand, within OHPLBJKB_01648 at 1733.659 kb on + strand, within OHPLBJKB_01648 at 1733.659 kb on + strand, within OHPLBJKB_01648 at 1733.659 kb on + strand, within OHPLBJKB_01648 at 1733.660 kb on - strand, within OHPLBJKB_01648 at 1733.660 kb on - strand, within OHPLBJKB_01648 at 1733.747 kb on + strand, within OHPLBJKB_01648 at 1733.748 kb on - strand, within OHPLBJKB_01648 at 1733.756 kb on + strand, within OHPLBJKB_01648 at 1733.757 kb on - strand, within OHPLBJKB_01648 at 1733.757 kb on - strand, within OHPLBJKB_01648 at 1733.759 kb on + strand, within OHPLBJKB_01648 at 1733.759 kb on + strand, within OHPLBJKB_01648 at 1733.759 kb on + strand, within OHPLBJKB_01648 at 1733.760 kb on - strand, within OHPLBJKB_01648 at 1733.775 kb on + strand, within OHPLBJKB_01648 at 1733.792 kb on + strand, within OHPLBJKB_01648 at 1733.793 kb on - strand, within OHPLBJKB_01648 at 1733.793 kb on - strand, within OHPLBJKB_01648 at 1733.797 kb on - strand, within OHPLBJKB_01648 at 1733.797 kb on - strand, within OHPLBJKB_01648 at 1733.797 kb on - strand, within OHPLBJKB_01648 at 1733.811 kb on + strand, within OHPLBJKB_01648 at 1733.882 kb on + strand, within OHPLBJKB_01648 at 1733.883 kb on - strand, within OHPLBJKB_01648 at 1733.883 kb on - strand, within OHPLBJKB_01648 at 1733.883 kb on - strand, within OHPLBJKB_01648 at 1733.885 kb on + strand, within OHPLBJKB_01648 at 1733.886 kb on - strand, within OHPLBJKB_01648 at 1733.895 kb on - strand, within OHPLBJKB_01648 at 1733.920 kb on + strand, within OHPLBJKB_01648 at 1733.921 kb on - strand, within OHPLBJKB_01648 at 1733.993 kb on - strand at 1734.038 kb on + strand at 1734.039 kb on - strand at 1734.116 kb on + strand at 1734.117 kb on - strand at 1734.121 kb on + strand at 1734.122 kb on - strand at 1734.184 kb on - strand at 1734.217 kb on - strand at 1734.251 kb on + strand at 1734.332 kb on - strand at 1734.332 kb on - strand at 1734.332 kb on - strand at 1734.430 kb on + strand, within OHPLBJKB_01649 at 1734.495 kb on + strand, within OHPLBJKB_01649 at 1734.495 kb on + strand, within OHPLBJKB_01649 at 1734.499 kb on + strand, within OHPLBJKB_01649 at 1734.516 kb on - strand, within OHPLBJKB_01649 at 1734.543 kb on + strand, within OHPLBJKB_01649 at 1734.543 kb on + strand, within OHPLBJKB_01649 at 1734.543 kb on + strand, within OHPLBJKB_01649 at 1734.543 kb on + strand, within OHPLBJKB_01649 at 1734.544 kb on - strand, within OHPLBJKB_01649 at 1734.544 kb on - strand, within OHPLBJKB_01649 at 1734.629 kb on - strand, within OHPLBJKB_01649 at 1734.656 kb on + strand, within OHPLBJKB_01649 at 1734.656 kb on + strand, within OHPLBJKB_01649 at 1734.656 kb on + strand, within OHPLBJKB_01649 at 1734.657 kb on - strand, within OHPLBJKB_01649 at 1734.657 kb on - strand, within OHPLBJKB_01649 at 1734.658 kb on + strand, within OHPLBJKB_01649 at 1734.658 kb on + strand, within OHPLBJKB_01649 at 1734.711 kb on + strand, within OHPLBJKB_01649 at 1734.711 kb on + strand, within OHPLBJKB_01649 at 1734.711 kb on + strand, within OHPLBJKB_01649 at 1734.711 kb on + strand, within OHPLBJKB_01649 at 1734.712 kb on - strand, within OHPLBJKB_01649 at 1734.731 kb on + strand, within OHPLBJKB_01649 at 1734.731 kb on + strand, within OHPLBJKB_01649 at 1734.731 kb on + strand, within OHPLBJKB_01649 at 1734.734 kb on - strand, within OHPLBJKB_01649 at 1734.788 kb on + strand, within OHPLBJKB_01649 at 1734.835 kb on + strand, within OHPLBJKB_01649 at 1734.861 kb on + strand, within OHPLBJKB_01649 at 1734.947 kb on + strand, within OHPLBJKB_01649 at 1734.947 kb on + strand, within OHPLBJKB_01649 at 1734.972 kb on + strand, within OHPLBJKB_01649 at 1734.986 kb on - strand, within OHPLBJKB_01649 at 1734.990 kb on + strand, within OHPLBJKB_01649 at 1734.990 kb on + strand, within OHPLBJKB_01649 at 1734.991 kb on - strand, within OHPLBJKB_01649 at 1734.991 kb on - strand, within OHPLBJKB_01649 at 1734.993 kb on - strand, within OHPLBJKB_01649 at 1735.004 kb on - strand, within OHPLBJKB_01649 at 1735.189 kb on + strand, within OHPLBJKB_01649 at 1735.190 kb on - strand, within OHPLBJKB_01649 at 1735.210 kb on + strand, within OHPLBJKB_01649 at 1735.211 kb on - strand, within OHPLBJKB_01649 at 1735.278 kb on - strand, within OHPLBJKB_01649 at 1735.289 kb on + strand, within OHPLBJKB_01649 at 1735.359 kb on + strand at 1735.366 kb on + strand at 1735.366 kb on + strand at 1735.388 kb on - strand at 1735.502 kb on + strand, within OHPLBJKB_01650 at 1735.633 kb on - strand, within OHPLBJKB_01650 at 1735.787 kb on - strand, within OHPLBJKB_01650 at 1736.062 kb on + strand at 1736.276 kb on + strand, within OHPLBJKB_01651 at 1736.276 kb on + strand, within OHPLBJKB_01651 at 1736.278 kb on + strand, within OHPLBJKB_01651 at 1736.279 kb on - strand, within OHPLBJKB_01651 at 1736.351 kb on + strand, within OHPLBJKB_01651
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 1,733,373 + OHPLBJKB_01648 0.47 -0.5 1,733,375 + OHPLBJKB_01648 0.48 +0.4 1,733,376 - OHPLBJKB_01648 0.48 +0.1 1,733,438 - OHPLBJKB_01648 0.52 +1.5 1,733,443 + OHPLBJKB_01648 0.52 +0.2 1,733,443 + OHPLBJKB_01648 0.52 +0.1 1,733,460 - OHPLBJKB_01648 0.54 -1.1 1,733,516 + OHPLBJKB_01648 0.57 +0.2 1,733,579 + OHPLBJKB_01648 0.62 +0.9 1,733,579 + OHPLBJKB_01648 0.62 +0.4 1,733,585 + OHPLBJKB_01648 0.62 -0.6 1,733,586 - OHPLBJKB_01648 0.62 -0.6 1,733,622 + OHPLBJKB_01648 0.65 +0.1 1,733,659 + OHPLBJKB_01648 0.67 +0.1 1,733,659 + OHPLBJKB_01648 0.67 +0.4 1,733,659 + OHPLBJKB_01648 0.67 +0.5 1,733,659 + OHPLBJKB_01648 0.67 -0.2 1,733,659 + OHPLBJKB_01648 0.67 -0.5 1,733,660 - OHPLBJKB_01648 0.68 +0.9 1,733,660 - OHPLBJKB_01648 0.68 +1.2 1,733,747 + OHPLBJKB_01648 0.74 +1.0 1,733,748 - OHPLBJKB_01648 0.74 -0.6 1,733,756 + OHPLBJKB_01648 0.74 +1.0 1,733,757 - OHPLBJKB_01648 0.74 +0.4 1,733,757 - OHPLBJKB_01648 0.74 -0.8 1,733,759 + OHPLBJKB_01648 0.74 +0.4 1,733,759 + OHPLBJKB_01648 0.74 -0.1 1,733,759 + OHPLBJKB_01648 0.74 -0.3 1,733,760 - OHPLBJKB_01648 0.74 -0.1 1,733,775 + OHPLBJKB_01648 0.76 -0.0 1,733,792 + OHPLBJKB_01648 0.77 +1.2 1,733,793 - OHPLBJKB_01648 0.77 +1.8 1,733,793 - OHPLBJKB_01648 0.77 -1.4 1,733,797 - OHPLBJKB_01648 0.77 +1.3 1,733,797 - OHPLBJKB_01648 0.77 +0.0 1,733,797 - OHPLBJKB_01648 0.77 -0.2 1,733,811 + OHPLBJKB_01648 0.78 +0.0 1,733,882 + OHPLBJKB_01648 0.83 -0.2 1,733,883 - OHPLBJKB_01648 0.83 -1.7 1,733,883 - OHPLBJKB_01648 0.83 +0.5 1,733,883 - OHPLBJKB_01648 0.83 -0.4 1,733,885 + OHPLBJKB_01648 0.83 -0.6 1,733,886 - OHPLBJKB_01648 0.83 +0.6 1,733,895 - OHPLBJKB_01648 0.84 +0.7 1,733,920 + OHPLBJKB_01648 0.86 -2.4 1,733,921 - OHPLBJKB_01648 0.86 -0.8 1,733,993 - -1.1 1,734,038 + +0.4 1,734,039 - +0.4 1,734,116 + -0.7 1,734,117 - +0.6 1,734,121 + -0.4 1,734,122 - -0.8 1,734,184 - +2.4 1,734,217 - -0.3 1,734,251 + -0.4 1,734,332 - +1.2 1,734,332 - -1.1 1,734,332 - -0.1 1,734,430 + OHPLBJKB_01649 0.14 +1.2 1,734,495 + OHPLBJKB_01649 0.20 -1.4 1,734,495 + OHPLBJKB_01649 0.20 -0.6 1,734,499 + OHPLBJKB_01649 0.20 -0.9 1,734,516 - OHPLBJKB_01649 0.22 -0.0 1,734,543 + OHPLBJKB_01649 0.24 -1.6 1,734,543 + OHPLBJKB_01649 0.24 -2.0 1,734,543 + OHPLBJKB_01649 0.24 -0.5 1,734,543 + OHPLBJKB_01649 0.24 -1.1 1,734,544 - OHPLBJKB_01649 0.24 +0.5 1,734,544 - OHPLBJKB_01649 0.24 +0.2 1,734,629 - OHPLBJKB_01649 0.32 -0.8 1,734,656 + OHPLBJKB_01649 0.34 -1.0 1,734,656 + OHPLBJKB_01649 0.34 -0.5 1,734,656 + OHPLBJKB_01649 0.34 -1.7 1,734,657 - OHPLBJKB_01649 0.34 -0.4 1,734,657 - OHPLBJKB_01649 0.34 +1.2 1,734,658 + OHPLBJKB_01649 0.34 -0.2 1,734,658 + OHPLBJKB_01649 0.34 -1.8 1,734,711 + OHPLBJKB_01649 0.39 -2.8 1,734,711 + OHPLBJKB_01649 0.39 -1.2 1,734,711 + OHPLBJKB_01649 0.39 +1.5 1,734,711 + OHPLBJKB_01649 0.39 -0.7 1,734,712 - OHPLBJKB_01649 0.39 +1.5 1,734,731 + OHPLBJKB_01649 0.41 +0.8 1,734,731 + OHPLBJKB_01649 0.41 -1.2 1,734,731 + OHPLBJKB_01649 0.41 -0.3 1,734,734 - OHPLBJKB_01649 0.41 -0.6 1,734,788 + OHPLBJKB_01649 0.46 -1.9 1,734,835 + OHPLBJKB_01649 0.50 -0.7 1,734,861 + OHPLBJKB_01649 0.52 -0.7 1,734,947 + OHPLBJKB_01649 0.60 -1.3 1,734,947 + OHPLBJKB_01649 0.60 -1.6 1,734,972 + OHPLBJKB_01649 0.62 -0.8 1,734,986 - OHPLBJKB_01649 0.63 +1.4 1,734,990 + OHPLBJKB_01649 0.63 -0.4 1,734,990 + OHPLBJKB_01649 0.63 -1.3 1,734,991 - OHPLBJKB_01649 0.64 +0.8 1,734,991 - OHPLBJKB_01649 0.64 -1.6 1,734,993 - OHPLBJKB_01649 0.64 +0.5 1,735,004 - OHPLBJKB_01649 0.65 -0.4 1,735,189 + OHPLBJKB_01649 0.81 -2.5 1,735,190 - OHPLBJKB_01649 0.81 +0.6 1,735,210 + OHPLBJKB_01649 0.83 +0.2 1,735,211 - OHPLBJKB_01649 0.83 -0.4 1,735,278 - OHPLBJKB_01649 0.89 -0.8 1,735,289 + OHPLBJKB_01649 0.90 -0.2 1,735,359 + +0.1 1,735,366 + +0.3 1,735,366 + -0.2 1,735,388 - -0.0 1,735,502 + OHPLBJKB_01650 0.22 -1.3 1,735,633 - OHPLBJKB_01650 0.52 +1.2 1,735,787 - OHPLBJKB_01650 0.87 -0.4 1,736,062 + -0.2 1,736,276 + OHPLBJKB_01651 0.19 -1.0 1,736,276 + OHPLBJKB_01651 0.19 +0.7 1,736,278 + OHPLBJKB_01651 0.19 +0.5 1,736,279 - OHPLBJKB_01651 0.19 -0.0 1,736,351 + OHPLBJKB_01651 0.23 +1.0
Or see this region's nucleotide sequence