Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01649

Experiment: Control_HSF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_01648 and OHPLBJKB_01649 are separated by 143 nucleotidesOHPLBJKB_01649 and OHPLBJKB_01650 are separated by 1 nucleotidesOHPLBJKB_01650 and OHPLBJKB_01651 are separated by 14 nucleotides OHPLBJKB_01648: OHPLBJKB_01648 - hypothetical protein, at 1,732,692 to 1,734,125 _01648 OHPLBJKB_01649: OHPLBJKB_01649 - hypothetical protein, at 1,734,269 to 1,735,405 _01649 OHPLBJKB_01650: OHPLBJKB_01650 - putative low molecular weight protein-tyrosine-phosphatase AmsI, at 1,735,407 to 1,735,844 _01650 OHPLBJKB_01651: OHPLBJKB_01651 - Putative tyrosine-protein kinase in cps region, at 1,735,859 to 1,738,027 _01651 Position (kb) 1734 1735 1736Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1733.373 kb on + strand, within OHPLBJKB_01648at 1733.375 kb on + strand, within OHPLBJKB_01648at 1733.376 kb on - strand, within OHPLBJKB_01648at 1733.438 kb on - strand, within OHPLBJKB_01648at 1733.443 kb on + strand, within OHPLBJKB_01648at 1733.443 kb on + strand, within OHPLBJKB_01648at 1733.460 kb on - strand, within OHPLBJKB_01648at 1733.516 kb on + strand, within OHPLBJKB_01648at 1733.579 kb on + strand, within OHPLBJKB_01648at 1733.579 kb on + strand, within OHPLBJKB_01648at 1733.585 kb on + strand, within OHPLBJKB_01648at 1733.586 kb on - strand, within OHPLBJKB_01648at 1733.622 kb on + strand, within OHPLBJKB_01648at 1733.659 kb on + strand, within OHPLBJKB_01648at 1733.659 kb on + strand, within OHPLBJKB_01648at 1733.659 kb on + strand, within OHPLBJKB_01648at 1733.659 kb on + strand, within OHPLBJKB_01648at 1733.659 kb on + strand, within OHPLBJKB_01648at 1733.660 kb on - strand, within OHPLBJKB_01648at 1733.660 kb on - strand, within OHPLBJKB_01648at 1733.747 kb on + strand, within OHPLBJKB_01648at 1733.748 kb on - strand, within OHPLBJKB_01648at 1733.756 kb on + strand, within OHPLBJKB_01648at 1733.757 kb on - strand, within OHPLBJKB_01648at 1733.757 kb on - strand, within OHPLBJKB_01648at 1733.759 kb on + strand, within OHPLBJKB_01648at 1733.759 kb on + strand, within OHPLBJKB_01648at 1733.759 kb on + strand, within OHPLBJKB_01648at 1733.760 kb on - strand, within OHPLBJKB_01648at 1733.775 kb on + strand, within OHPLBJKB_01648at 1733.792 kb on + strand, within OHPLBJKB_01648at 1733.793 kb on - strand, within OHPLBJKB_01648at 1733.793 kb on - strand, within OHPLBJKB_01648at 1733.797 kb on - strand, within OHPLBJKB_01648at 1733.797 kb on - strand, within OHPLBJKB_01648at 1733.797 kb on - strand, within OHPLBJKB_01648at 1733.811 kb on + strand, within OHPLBJKB_01648at 1733.882 kb on + strand, within OHPLBJKB_01648at 1733.883 kb on - strand, within OHPLBJKB_01648at 1733.883 kb on - strand, within OHPLBJKB_01648at 1733.883 kb on - strand, within OHPLBJKB_01648at 1733.885 kb on + strand, within OHPLBJKB_01648at 1733.886 kb on - strand, within OHPLBJKB_01648at 1733.895 kb on - strand, within OHPLBJKB_01648at 1733.920 kb on + strand, within OHPLBJKB_01648at 1733.921 kb on - strand, within OHPLBJKB_01648at 1733.993 kb on - strandat 1734.038 kb on + strandat 1734.039 kb on - strandat 1734.116 kb on + strandat 1734.117 kb on - strandat 1734.121 kb on + strandat 1734.122 kb on - strandat 1734.184 kb on - strandat 1734.217 kb on - strandat 1734.251 kb on + strandat 1734.332 kb on - strandat 1734.332 kb on - strandat 1734.332 kb on - strandat 1734.430 kb on + strand, within OHPLBJKB_01649at 1734.495 kb on + strand, within OHPLBJKB_01649at 1734.495 kb on + strand, within OHPLBJKB_01649at 1734.499 kb on + strand, within OHPLBJKB_01649at 1734.516 kb on - strand, within OHPLBJKB_01649at 1734.543 kb on + strand, within OHPLBJKB_01649at 1734.543 kb on + strand, within OHPLBJKB_01649at 1734.543 kb on + strand, within OHPLBJKB_01649at 1734.543 kb on + strand, within OHPLBJKB_01649at 1734.544 kb on - strand, within OHPLBJKB_01649at 1734.544 kb on - strand, within OHPLBJKB_01649at 1734.629 kb on - strand, within OHPLBJKB_01649at 1734.656 kb on + strand, within OHPLBJKB_01649at 1734.656 kb on + strand, within OHPLBJKB_01649at 1734.656 kb on + strand, within OHPLBJKB_01649at 1734.657 kb on - strand, within OHPLBJKB_01649at 1734.657 kb on - strand, within OHPLBJKB_01649at 1734.658 kb on + strand, within OHPLBJKB_01649at 1734.658 kb on + strand, within OHPLBJKB_01649at 1734.711 kb on + strand, within OHPLBJKB_01649at 1734.711 kb on + strand, within OHPLBJKB_01649at 1734.711 kb on + strand, within OHPLBJKB_01649at 1734.711 kb on + strand, within OHPLBJKB_01649at 1734.712 kb on - strand, within OHPLBJKB_01649at 1734.731 kb on + strand, within OHPLBJKB_01649at 1734.731 kb on + strand, within OHPLBJKB_01649at 1734.731 kb on + strand, within OHPLBJKB_01649at 1734.734 kb on - strand, within OHPLBJKB_01649at 1734.788 kb on + strand, within OHPLBJKB_01649at 1734.835 kb on + strand, within OHPLBJKB_01649at 1734.861 kb on + strand, within OHPLBJKB_01649at 1734.947 kb on + strand, within OHPLBJKB_01649at 1734.947 kb on + strand, within OHPLBJKB_01649at 1734.972 kb on + strand, within OHPLBJKB_01649at 1734.986 kb on - strand, within OHPLBJKB_01649at 1734.990 kb on + strand, within OHPLBJKB_01649at 1734.990 kb on + strand, within OHPLBJKB_01649at 1734.991 kb on - strand, within OHPLBJKB_01649at 1734.991 kb on - strand, within OHPLBJKB_01649at 1734.993 kb on - strand, within OHPLBJKB_01649at 1735.004 kb on - strand, within OHPLBJKB_01649at 1735.189 kb on + strand, within OHPLBJKB_01649at 1735.190 kb on - strand, within OHPLBJKB_01649at 1735.210 kb on + strand, within OHPLBJKB_01649at 1735.211 kb on - strand, within OHPLBJKB_01649at 1735.278 kb on - strand, within OHPLBJKB_01649at 1735.289 kb on + strand, within OHPLBJKB_01649at 1735.359 kb on + strandat 1735.366 kb on + strandat 1735.366 kb on + strandat 1735.388 kb on - strandat 1735.502 kb on + strand, within OHPLBJKB_01650at 1735.633 kb on - strand, within OHPLBJKB_01650at 1735.787 kb on - strand, within OHPLBJKB_01650at 1736.062 kb on + strandat 1736.276 kb on + strand, within OHPLBJKB_01651at 1736.276 kb on + strand, within OHPLBJKB_01651at 1736.278 kb on + strand, within OHPLBJKB_01651at 1736.279 kb on - strand, within OHPLBJKB_01651at 1736.351 kb on + strand, within OHPLBJKB_01651

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_HSF
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1,733,373 + OHPLBJKB_01648 0.47 -0.5
1,733,375 + OHPLBJKB_01648 0.48 +0.4
1,733,376 - OHPLBJKB_01648 0.48 +0.1
1,733,438 - OHPLBJKB_01648 0.52 +1.5
1,733,443 + OHPLBJKB_01648 0.52 +0.2
1,733,443 + OHPLBJKB_01648 0.52 +0.1
1,733,460 - OHPLBJKB_01648 0.54 -1.1
1,733,516 + OHPLBJKB_01648 0.57 +0.2
1,733,579 + OHPLBJKB_01648 0.62 +0.9
1,733,579 + OHPLBJKB_01648 0.62 +0.4
1,733,585 + OHPLBJKB_01648 0.62 -0.6
1,733,586 - OHPLBJKB_01648 0.62 -0.6
1,733,622 + OHPLBJKB_01648 0.65 +0.1
1,733,659 + OHPLBJKB_01648 0.67 +0.1
1,733,659 + OHPLBJKB_01648 0.67 +0.4
1,733,659 + OHPLBJKB_01648 0.67 +0.5
1,733,659 + OHPLBJKB_01648 0.67 -0.2
1,733,659 + OHPLBJKB_01648 0.67 -0.5
1,733,660 - OHPLBJKB_01648 0.68 +0.9
1,733,660 - OHPLBJKB_01648 0.68 +1.2
1,733,747 + OHPLBJKB_01648 0.74 +1.0
1,733,748 - OHPLBJKB_01648 0.74 -0.6
1,733,756 + OHPLBJKB_01648 0.74 +1.0
1,733,757 - OHPLBJKB_01648 0.74 +0.4
1,733,757 - OHPLBJKB_01648 0.74 -0.8
1,733,759 + OHPLBJKB_01648 0.74 +0.4
1,733,759 + OHPLBJKB_01648 0.74 -0.1
1,733,759 + OHPLBJKB_01648 0.74 -0.3
1,733,760 - OHPLBJKB_01648 0.74 -0.1
1,733,775 + OHPLBJKB_01648 0.76 -0.0
1,733,792 + OHPLBJKB_01648 0.77 +1.2
1,733,793 - OHPLBJKB_01648 0.77 +1.8
1,733,793 - OHPLBJKB_01648 0.77 -1.4
1,733,797 - OHPLBJKB_01648 0.77 +1.3
1,733,797 - OHPLBJKB_01648 0.77 +0.0
1,733,797 - OHPLBJKB_01648 0.77 -0.2
1,733,811 + OHPLBJKB_01648 0.78 +0.0
1,733,882 + OHPLBJKB_01648 0.83 -0.2
1,733,883 - OHPLBJKB_01648 0.83 -1.7
1,733,883 - OHPLBJKB_01648 0.83 +0.5
1,733,883 - OHPLBJKB_01648 0.83 -0.4
1,733,885 + OHPLBJKB_01648 0.83 -0.6
1,733,886 - OHPLBJKB_01648 0.83 +0.6
1,733,895 - OHPLBJKB_01648 0.84 +0.7
1,733,920 + OHPLBJKB_01648 0.86 -2.4
1,733,921 - OHPLBJKB_01648 0.86 -0.8
1,733,993 - -1.1
1,734,038 + +0.4
1,734,039 - +0.4
1,734,116 + -0.7
1,734,117 - +0.6
1,734,121 + -0.4
1,734,122 - -0.8
1,734,184 - +2.4
1,734,217 - -0.3
1,734,251 + -0.4
1,734,332 - +1.2
1,734,332 - -1.1
1,734,332 - -0.1
1,734,430 + OHPLBJKB_01649 0.14 +1.2
1,734,495 + OHPLBJKB_01649 0.20 -1.4
1,734,495 + OHPLBJKB_01649 0.20 -0.6
1,734,499 + OHPLBJKB_01649 0.20 -0.9
1,734,516 - OHPLBJKB_01649 0.22 -0.0
1,734,543 + OHPLBJKB_01649 0.24 -1.6
1,734,543 + OHPLBJKB_01649 0.24 -2.0
1,734,543 + OHPLBJKB_01649 0.24 -0.5
1,734,543 + OHPLBJKB_01649 0.24 -1.1
1,734,544 - OHPLBJKB_01649 0.24 +0.5
1,734,544 - OHPLBJKB_01649 0.24 +0.2
1,734,629 - OHPLBJKB_01649 0.32 -0.8
1,734,656 + OHPLBJKB_01649 0.34 -1.0
1,734,656 + OHPLBJKB_01649 0.34 -0.5
1,734,656 + OHPLBJKB_01649 0.34 -1.7
1,734,657 - OHPLBJKB_01649 0.34 -0.4
1,734,657 - OHPLBJKB_01649 0.34 +1.2
1,734,658 + OHPLBJKB_01649 0.34 -0.2
1,734,658 + OHPLBJKB_01649 0.34 -1.8
1,734,711 + OHPLBJKB_01649 0.39 -2.8
1,734,711 + OHPLBJKB_01649 0.39 -1.2
1,734,711 + OHPLBJKB_01649 0.39 +1.5
1,734,711 + OHPLBJKB_01649 0.39 -0.7
1,734,712 - OHPLBJKB_01649 0.39 +1.5
1,734,731 + OHPLBJKB_01649 0.41 +0.8
1,734,731 + OHPLBJKB_01649 0.41 -1.2
1,734,731 + OHPLBJKB_01649 0.41 -0.3
1,734,734 - OHPLBJKB_01649 0.41 -0.6
1,734,788 + OHPLBJKB_01649 0.46 -1.9
1,734,835 + OHPLBJKB_01649 0.50 -0.7
1,734,861 + OHPLBJKB_01649 0.52 -0.7
1,734,947 + OHPLBJKB_01649 0.60 -1.3
1,734,947 + OHPLBJKB_01649 0.60 -1.6
1,734,972 + OHPLBJKB_01649 0.62 -0.8
1,734,986 - OHPLBJKB_01649 0.63 +1.4
1,734,990 + OHPLBJKB_01649 0.63 -0.4
1,734,990 + OHPLBJKB_01649 0.63 -1.3
1,734,991 - OHPLBJKB_01649 0.64 +0.8
1,734,991 - OHPLBJKB_01649 0.64 -1.6
1,734,993 - OHPLBJKB_01649 0.64 +0.5
1,735,004 - OHPLBJKB_01649 0.65 -0.4
1,735,189 + OHPLBJKB_01649 0.81 -2.5
1,735,190 - OHPLBJKB_01649 0.81 +0.6
1,735,210 + OHPLBJKB_01649 0.83 +0.2
1,735,211 - OHPLBJKB_01649 0.83 -0.4
1,735,278 - OHPLBJKB_01649 0.89 -0.8
1,735,289 + OHPLBJKB_01649 0.90 -0.2
1,735,359 + +0.1
1,735,366 + +0.3
1,735,366 + -0.2
1,735,388 - -0.0
1,735,502 + OHPLBJKB_01650 0.22 -1.3
1,735,633 - OHPLBJKB_01650 0.52 +1.2
1,735,787 - OHPLBJKB_01650 0.87 -0.4
1,736,062 + -0.2
1,736,276 + OHPLBJKB_01651 0.19 -1.0
1,736,276 + OHPLBJKB_01651 0.19 +0.7
1,736,278 + OHPLBJKB_01651 0.19 +0.5
1,736,279 - OHPLBJKB_01651 0.19 -0.0
1,736,351 + OHPLBJKB_01651 0.23 +1.0

Or see this region's nucleotide sequence