Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01429 and OHPLBJKB_01430 are separated by 6 nucleotides OHPLBJKB_01430 and OHPLBJKB_01431 are separated by 83 nucleotides OHPLBJKB_01431 and OHPLBJKB_01432 are separated by 58 nucleotides
OHPLBJKB_01429: OHPLBJKB_01429 - NADH-quinone oxidoreductase subunit M, at 1,476,014 to 1,477,543
_01429
OHPLBJKB_01430: OHPLBJKB_01430 - NADH-quinone oxidoreductase subunit N, at 1,477,550 to 1,479,007
_01430
OHPLBJKB_01431: OHPLBJKB_01431 - hypothetical protein, at 1,479,091 to 1,479,939
_01431
OHPLBJKB_01432: OHPLBJKB_01432 - hypothetical protein, at 1,479,998 to 1,480,420
_01432
Position (kb)
1477
1478
1479
1480 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1476.602 kb on + strand, within OHPLBJKB_01429 at 1476.649 kb on + strand, within OHPLBJKB_01429 at 1476.674 kb on + strand, within OHPLBJKB_01429 at 1476.681 kb on + strand, within OHPLBJKB_01429 at 1476.884 kb on - strand, within OHPLBJKB_01429 at 1476.884 kb on - strand, within OHPLBJKB_01429 at 1476.962 kb on + strand, within OHPLBJKB_01429 at 1476.963 kb on - strand, within OHPLBJKB_01429 at 1476.963 kb on - strand, within OHPLBJKB_01429 at 1477.004 kb on + strand, within OHPLBJKB_01429 at 1477.004 kb on + strand, within OHPLBJKB_01429 at 1477.109 kb on - strand, within OHPLBJKB_01429 at 1477.237 kb on + strand, within OHPLBJKB_01429 at 1477.332 kb on + strand, within OHPLBJKB_01429 at 1477.516 kb on + strand at 1477.529 kb on - strand at 1477.841 kb on + strand, within OHPLBJKB_01430 at 1477.879 kb on - strand, within OHPLBJKB_01430 at 1478.025 kb on - strand, within OHPLBJKB_01430 at 1478.082 kb on - strand, within OHPLBJKB_01430 at 1478.137 kb on + strand, within OHPLBJKB_01430 at 1478.238 kb on + strand, within OHPLBJKB_01430 at 1478.238 kb on + strand, within OHPLBJKB_01430 at 1478.238 kb on + strand, within OHPLBJKB_01430 at 1478.239 kb on - strand, within OHPLBJKB_01430 at 1478.239 kb on - strand, within OHPLBJKB_01430 at 1478.240 kb on + strand, within OHPLBJKB_01430 at 1478.327 kb on + strand, within OHPLBJKB_01430 at 1478.328 kb on - strand, within OHPLBJKB_01430 at 1478.455 kb on + strand, within OHPLBJKB_01430 at 1478.456 kb on - strand, within OHPLBJKB_01430 at 1478.456 kb on - strand, within OHPLBJKB_01430 at 1478.456 kb on - strand, within OHPLBJKB_01430 at 1478.738 kb on + strand, within OHPLBJKB_01430 at 1478.819 kb on + strand, within OHPLBJKB_01430 at 1478.823 kb on - strand, within OHPLBJKB_01430 at 1479.005 kb on + strand at 1479.005 kb on + strand at 1479.005 kb on + strand at 1479.005 kb on + strand at 1479.005 kb on + strand at 1479.021 kb on - strand at 1479.074 kb on + strand at 1479.074 kb on + strand at 1479.074 kb on + strand at 1479.074 kb on + strand at 1479.074 kb on + strand at 1479.075 kb on - strand at 1479.075 kb on - strand at 1479.093 kb on - strand at 1479.105 kb on + strand at 1479.133 kb on + strand at 1479.134 kb on - strand at 1479.166 kb on - strand at 1479.176 kb on + strand, within OHPLBJKB_01431 at 1479.221 kb on + strand, within OHPLBJKB_01431 at 1479.226 kb on - strand, within OHPLBJKB_01431 at 1479.230 kb on - strand, within OHPLBJKB_01431 at 1479.303 kb on + strand, within OHPLBJKB_01431 at 1479.304 kb on - strand, within OHPLBJKB_01431 at 1479.331 kb on - strand, within OHPLBJKB_01431 at 1479.458 kb on + strand, within OHPLBJKB_01431 at 1479.466 kb on - strand, within OHPLBJKB_01431 at 1479.572 kb on - strand, within OHPLBJKB_01431 at 1479.721 kb on - strand, within OHPLBJKB_01431 at 1479.739 kb on + strand, within OHPLBJKB_01431 at 1479.775 kb on + strand, within OHPLBJKB_01431 at 1479.776 kb on - strand, within OHPLBJKB_01431 at 1479.776 kb on - strand, within OHPLBJKB_01431 at 1479.777 kb on + strand, within OHPLBJKB_01431 at 1479.777 kb on + strand, within OHPLBJKB_01431 at 1479.777 kb on + strand, within OHPLBJKB_01431 at 1479.777 kb on + strand, within OHPLBJKB_01431 at 1479.778 kb on - strand, within OHPLBJKB_01431 at 1479.778 kb on - strand, within OHPLBJKB_01431 at 1479.778 kb on - strand, within OHPLBJKB_01431 at 1479.778 kb on - strand, within OHPLBJKB_01431 at 1479.778 kb on - strand, within OHPLBJKB_01431 at 1479.781 kb on + strand, within OHPLBJKB_01431 at 1479.786 kb on + strand, within OHPLBJKB_01431 at 1479.787 kb on - strand, within OHPLBJKB_01431 at 1479.787 kb on - strand, within OHPLBJKB_01431 at 1479.787 kb on - strand, within OHPLBJKB_01431 at 1479.787 kb on - strand, within OHPLBJKB_01431 at 1479.809 kb on + strand, within OHPLBJKB_01431 at 1479.810 kb on - strand, within OHPLBJKB_01431 at 1479.836 kb on + strand, within OHPLBJKB_01431 at 1479.849 kb on + strand, within OHPLBJKB_01431 at 1479.849 kb on + strand, within OHPLBJKB_01431 at 1479.849 kb on + strand, within OHPLBJKB_01431 at 1479.849 kb on + strand, within OHPLBJKB_01431 at 1479.850 kb on - strand, within OHPLBJKB_01431 at 1479.913 kb on - strand at 1479.913 kb on - strand at 1479.931 kb on - strand at 1479.967 kb on - strand at 1479.987 kb on - strand at 1479.991 kb on - strand at 1480.000 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 1,476,602 + OHPLBJKB_01429 0.38 -0.3 1,476,649 + OHPLBJKB_01429 0.42 -1.9 1,476,674 + OHPLBJKB_01429 0.43 -0.3 1,476,681 + OHPLBJKB_01429 0.44 -0.3 1,476,884 - OHPLBJKB_01429 0.57 -1.7 1,476,884 - OHPLBJKB_01429 0.57 -0.6 1,476,962 + OHPLBJKB_01429 0.62 -0.3 1,476,963 - OHPLBJKB_01429 0.62 -2.3 1,476,963 - OHPLBJKB_01429 0.62 -0.3 1,477,004 + OHPLBJKB_01429 0.65 -0.7 1,477,004 + OHPLBJKB_01429 0.65 -0.9 1,477,109 - OHPLBJKB_01429 0.72 +0.3 1,477,237 + OHPLBJKB_01429 0.80 -1.5 1,477,332 + OHPLBJKB_01429 0.86 -0.3 1,477,516 + -0.1 1,477,529 - +0.3 1,477,841 + OHPLBJKB_01430 0.20 +0.3 1,477,879 - OHPLBJKB_01430 0.23 -0.7 1,478,025 - OHPLBJKB_01430 0.33 -0.3 1,478,082 - OHPLBJKB_01430 0.36 -0.3 1,478,137 + OHPLBJKB_01430 0.40 -0.3 1,478,238 + OHPLBJKB_01430 0.47 -1.0 1,478,238 + OHPLBJKB_01430 0.47 +1.0 1,478,238 + OHPLBJKB_01430 0.47 +1.3 1,478,239 - OHPLBJKB_01430 0.47 +0.7 1,478,239 - OHPLBJKB_01430 0.47 +0.3 1,478,240 + OHPLBJKB_01430 0.47 -1.2 1,478,327 + OHPLBJKB_01430 0.53 -0.3 1,478,328 - OHPLBJKB_01430 0.53 -0.7 1,478,455 + OHPLBJKB_01430 0.62 -0.3 1,478,456 - OHPLBJKB_01430 0.62 +0.1 1,478,456 - OHPLBJKB_01430 0.62 -1.3 1,478,456 - OHPLBJKB_01430 0.62 -2.3 1,478,738 + OHPLBJKB_01430 0.81 +0.9 1,478,819 + OHPLBJKB_01430 0.87 -0.8 1,478,823 - OHPLBJKB_01430 0.87 -0.5 1,479,005 + -1.4 1,479,005 + -1.3 1,479,005 + -0.4 1,479,005 + +1.9 1,479,005 + -1.2 1,479,021 - -0.7 1,479,074 + -0.4 1,479,074 + +0.6 1,479,074 + +0.1 1,479,074 + +1.3 1,479,074 + -0.5 1,479,075 - -0.9 1,479,075 - +0.0 1,479,093 - +0.3 1,479,105 + -0.0 1,479,133 + +0.5 1,479,134 - -0.6 1,479,166 - -0.4 1,479,176 + OHPLBJKB_01431 0.10 +0.3 1,479,221 + OHPLBJKB_01431 0.15 -1.3 1,479,226 - OHPLBJKB_01431 0.16 +0.8 1,479,230 - OHPLBJKB_01431 0.16 +0.9 1,479,303 + OHPLBJKB_01431 0.25 -1.0 1,479,304 - OHPLBJKB_01431 0.25 +1.6 1,479,331 - OHPLBJKB_01431 0.28 +1.3 1,479,458 + OHPLBJKB_01431 0.43 +0.5 1,479,466 - OHPLBJKB_01431 0.44 +0.6 1,479,572 - OHPLBJKB_01431 0.57 +0.5 1,479,721 - OHPLBJKB_01431 0.74 -1.3 1,479,739 + OHPLBJKB_01431 0.76 +0.9 1,479,775 + OHPLBJKB_01431 0.81 -0.4 1,479,776 - OHPLBJKB_01431 0.81 +1.3 1,479,776 - OHPLBJKB_01431 0.81 -0.3 1,479,777 + OHPLBJKB_01431 0.81 -0.3 1,479,777 + OHPLBJKB_01431 0.81 -0.8 1,479,777 + OHPLBJKB_01431 0.81 +0.1 1,479,777 + OHPLBJKB_01431 0.81 -0.0 1,479,778 - OHPLBJKB_01431 0.81 -1.4 1,479,778 - OHPLBJKB_01431 0.81 +0.2 1,479,778 - OHPLBJKB_01431 0.81 -0.0 1,479,778 - OHPLBJKB_01431 0.81 +0.4 1,479,778 - OHPLBJKB_01431 0.81 +0.3 1,479,781 + OHPLBJKB_01431 0.81 -0.1 1,479,786 + OHPLBJKB_01431 0.82 +0.2 1,479,787 - OHPLBJKB_01431 0.82 +0.5 1,479,787 - OHPLBJKB_01431 0.82 -0.2 1,479,787 - OHPLBJKB_01431 0.82 +1.0 1,479,787 - OHPLBJKB_01431 0.82 +0.9 1,479,809 + OHPLBJKB_01431 0.85 -0.7 1,479,810 - OHPLBJKB_01431 0.85 +0.8 1,479,836 + OHPLBJKB_01431 0.88 +0.4 1,479,849 + OHPLBJKB_01431 0.89 +0.2 1,479,849 + OHPLBJKB_01431 0.89 +0.5 1,479,849 + OHPLBJKB_01431 0.89 +0.3 1,479,849 + OHPLBJKB_01431 0.89 +1.0 1,479,850 - OHPLBJKB_01431 0.89 +0.1 1,479,913 - +0.3 1,479,913 - +1.2 1,479,931 - +0.3 1,479,967 - -0.3 1,479,987 - -0.0 1,479,991 - -1.2 1,480,000 - +0.9
Or see this region's nucleotide sequence