Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01422 and OHPLBJKB_01423 are separated by 52 nucleotides OHPLBJKB_01423 and OHPLBJKB_01424 overlap by 4 nucleotides OHPLBJKB_01424 and OHPLBJKB_01425 are separated by 14 nucleotides
OHPLBJKB_01422: OHPLBJKB_01422 - NADH-quinone oxidoreductase subunit F, at 1,467,500 to 1,468,837
_01422
OHPLBJKB_01423: OHPLBJKB_01423 - NADH-quinone oxidoreductase subunit G, at 1,468,890 to 1,471,616
_01423
OHPLBJKB_01424: OHPLBJKB_01424 - NADH-quinone oxidoreductase subunit H, at 1,471,613 to 1,472,590
_01424
OHPLBJKB_01425: OHPLBJKB_01425 - NADH-quinone oxidoreductase subunit I, at 1,472,605 to 1,473,147
_01425
Position (kb)
1468
1469
1470
1471
1472 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1467.905 kb on + strand, within OHPLBJKB_01422 at 1467.906 kb on - strand, within OHPLBJKB_01422 at 1467.906 kb on - strand, within OHPLBJKB_01422 at 1467.922 kb on - strand, within OHPLBJKB_01422 at 1467.980 kb on - strand, within OHPLBJKB_01422 at 1468.032 kb on - strand, within OHPLBJKB_01422 at 1468.033 kb on + strand, within OHPLBJKB_01422 at 1468.034 kb on - strand, within OHPLBJKB_01422 at 1468.168 kb on + strand, within OHPLBJKB_01422 at 1468.301 kb on - strand, within OHPLBJKB_01422 at 1468.328 kb on + strand, within OHPLBJKB_01422 at 1468.520 kb on - strand, within OHPLBJKB_01422 at 1468.561 kb on + strand, within OHPLBJKB_01422 at 1468.889 kb on - strand at 1468.889 kb on - strand at 1468.906 kb on + strand at 1468.906 kb on + strand at 1468.907 kb on - strand at 1468.907 kb on - strand at 1469.288 kb on + strand, within OHPLBJKB_01423 at 1469.297 kb on + strand, within OHPLBJKB_01423 at 1469.298 kb on - strand, within OHPLBJKB_01423 at 1469.407 kb on - strand, within OHPLBJKB_01423 at 1469.504 kb on - strand, within OHPLBJKB_01423 at 1469.540 kb on + strand, within OHPLBJKB_01423 at 1469.540 kb on + strand, within OHPLBJKB_01423 at 1469.541 kb on - strand, within OHPLBJKB_01423 at 1469.595 kb on - strand, within OHPLBJKB_01423 at 1469.667 kb on + strand, within OHPLBJKB_01423 at 1469.668 kb on - strand, within OHPLBJKB_01423 at 1469.704 kb on - strand, within OHPLBJKB_01423 at 1469.801 kb on + strand, within OHPLBJKB_01423 at 1469.902 kb on - strand, within OHPLBJKB_01423 at 1469.902 kb on - strand, within OHPLBJKB_01423 at 1469.973 kb on + strand, within OHPLBJKB_01423 at 1469.973 kb on + strand, within OHPLBJKB_01423 at 1469.973 kb on + strand, within OHPLBJKB_01423 at 1469.973 kb on + strand, within OHPLBJKB_01423 at 1469.974 kb on - strand, within OHPLBJKB_01423 at 1469.974 kb on - strand, within OHPLBJKB_01423 at 1469.974 kb on - strand, within OHPLBJKB_01423 at 1470.213 kb on - strand, within OHPLBJKB_01423 at 1470.259 kb on + strand, within OHPLBJKB_01423 at 1470.260 kb on - strand, within OHPLBJKB_01423 at 1470.384 kb on - strand, within OHPLBJKB_01423 at 1470.405 kb on - strand, within OHPLBJKB_01423 at 1470.409 kb on + strand, within OHPLBJKB_01423 at 1470.409 kb on + strand, within OHPLBJKB_01423 at 1470.789 kb on + strand, within OHPLBJKB_01423 at 1470.801 kb on + strand, within OHPLBJKB_01423 at 1470.804 kb on + strand, within OHPLBJKB_01423 at 1470.844 kb on + strand, within OHPLBJKB_01423 at 1470.844 kb on + strand, within OHPLBJKB_01423 at 1470.844 kb on + strand, within OHPLBJKB_01423 at 1470.945 kb on - strand, within OHPLBJKB_01423 at 1471.026 kb on - strand, within OHPLBJKB_01423 at 1471.076 kb on + strand, within OHPLBJKB_01423 at 1471.272 kb on + strand, within OHPLBJKB_01423 at 1471.322 kb on + strand, within OHPLBJKB_01423 at 1471.335 kb on + strand, within OHPLBJKB_01423 at 1471.404 kb on + strand at 1471.405 kb on - strand at 1471.454 kb on + strand at 1471.551 kb on - strand at 1471.759 kb on + strand, within OHPLBJKB_01424 at 1471.760 kb on - strand, within OHPLBJKB_01424 at 1472.024 kb on - strand, within OHPLBJKB_01424 at 1472.024 kb on - strand, within OHPLBJKB_01424 at 1472.204 kb on - strand, within OHPLBJKB_01424 at 1472.336 kb on + strand, within OHPLBJKB_01424 at 1472.336 kb on + strand, within OHPLBJKB_01424 at 1472.336 kb on + strand, within OHPLBJKB_01424 at 1472.337 kb on - strand, within OHPLBJKB_01424 at 1472.337 kb on - strand, within OHPLBJKB_01424 at 1472.337 kb on - strand, within OHPLBJKB_01424
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 1,467,905 + OHPLBJKB_01422 0.30 -0.0 1,467,906 - OHPLBJKB_01422 0.30 +0.3 1,467,906 - OHPLBJKB_01422 0.30 +0.3 1,467,922 - OHPLBJKB_01422 0.32 -1.7 1,467,980 - OHPLBJKB_01422 0.36 -0.6 1,468,032 - OHPLBJKB_01422 0.40 -1.0 1,468,033 + OHPLBJKB_01422 0.40 -2.0 1,468,034 - OHPLBJKB_01422 0.40 -1.5 1,468,168 + OHPLBJKB_01422 0.50 +1.3 1,468,301 - OHPLBJKB_01422 0.60 +0.9 1,468,328 + OHPLBJKB_01422 0.62 +0.7 1,468,520 - OHPLBJKB_01422 0.76 -1.7 1,468,561 + OHPLBJKB_01422 0.79 -0.7 1,468,889 - +0.7 1,468,889 - -1.2 1,468,906 + -0.3 1,468,906 + -1.3 1,468,907 - +0.3 1,468,907 - +0.1 1,469,288 + OHPLBJKB_01423 0.15 +0.9 1,469,297 + OHPLBJKB_01423 0.15 -1.5 1,469,298 - OHPLBJKB_01423 0.15 -0.7 1,469,407 - OHPLBJKB_01423 0.19 -1.3 1,469,504 - OHPLBJKB_01423 0.23 -1.5 1,469,540 + OHPLBJKB_01423 0.24 -0.1 1,469,540 + OHPLBJKB_01423 0.24 -2.0 1,469,541 - OHPLBJKB_01423 0.24 -1.5 1,469,595 - OHPLBJKB_01423 0.26 -0.5 1,469,667 + OHPLBJKB_01423 0.28 -1.6 1,469,668 - OHPLBJKB_01423 0.29 -0.7 1,469,704 - OHPLBJKB_01423 0.30 +1.3 1,469,801 + OHPLBJKB_01423 0.33 -1.0 1,469,902 - OHPLBJKB_01423 0.37 -0.5 1,469,902 - OHPLBJKB_01423 0.37 +0.7 1,469,973 + OHPLBJKB_01423 0.40 -1.0 1,469,973 + OHPLBJKB_01423 0.40 -0.3 1,469,973 + OHPLBJKB_01423 0.40 +0.1 1,469,973 + OHPLBJKB_01423 0.40 -0.1 1,469,974 - OHPLBJKB_01423 0.40 -0.0 1,469,974 - OHPLBJKB_01423 0.40 +0.3 1,469,974 - OHPLBJKB_01423 0.40 -1.9 1,470,213 - OHPLBJKB_01423 0.49 -1.0 1,470,259 + OHPLBJKB_01423 0.50 -1.2 1,470,260 - OHPLBJKB_01423 0.50 +0.1 1,470,384 - OHPLBJKB_01423 0.55 +0.1 1,470,405 - OHPLBJKB_01423 0.56 -0.3 1,470,409 + OHPLBJKB_01423 0.56 -1.5 1,470,409 + OHPLBJKB_01423 0.56 +1.3 1,470,789 + OHPLBJKB_01423 0.70 -1.3 1,470,801 + OHPLBJKB_01423 0.70 -0.5 1,470,804 + OHPLBJKB_01423 0.70 +0.3 1,470,844 + OHPLBJKB_01423 0.72 +0.2 1,470,844 + OHPLBJKB_01423 0.72 +1.9 1,470,844 + OHPLBJKB_01423 0.72 +0.1 1,470,945 - OHPLBJKB_01423 0.75 +0.0 1,471,026 - OHPLBJKB_01423 0.78 -0.1 1,471,076 + OHPLBJKB_01423 0.80 -0.3 1,471,272 + OHPLBJKB_01423 0.87 +0.7 1,471,322 + OHPLBJKB_01423 0.89 -0.8 1,471,335 + OHPLBJKB_01423 0.90 +0.3 1,471,404 + +1.3 1,471,405 - +0.1 1,471,454 + -0.3 1,471,551 - -1.0 1,471,759 + OHPLBJKB_01424 0.15 +1.1 1,471,760 - OHPLBJKB_01424 0.15 -0.7 1,472,024 - OHPLBJKB_01424 0.42 -0.7 1,472,024 - OHPLBJKB_01424 0.42 -1.5 1,472,204 - OHPLBJKB_01424 0.60 +0.1 1,472,336 + OHPLBJKB_01424 0.74 +0.5 1,472,336 + OHPLBJKB_01424 0.74 +0.7 1,472,336 + OHPLBJKB_01424 0.74 +0.3 1,472,337 - OHPLBJKB_01424 0.74 +0.3 1,472,337 - OHPLBJKB_01424 0.74 -0.3 1,472,337 - OHPLBJKB_01424 0.74 -0.0
Or see this region's nucleotide sequence