Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01353 and OHPLBJKB_01354 overlap by 1 nucleotides OHPLBJKB_01354 and OHPLBJKB_01355 are separated by 107 nucleotides
OHPLBJKB_01353: OHPLBJKB_01353 - putative multidrug resistance protein EmrK, at 1,395,882 to 1,397,045
_01353
OHPLBJKB_01354: OHPLBJKB_01354 - putative multidrug resistance protein EmrY, at 1,397,045 to 1,398,583
_01354
OHPLBJKB_01355: OHPLBJKB_01355 - D-serine dehydratase, at 1,398,691 to 1,400,019
_01355
Position (kb)
1397
1398
1399 Strain fitness (log2 ratio)
-1
0
1
2 at 1396.209 kb on - strand, within OHPLBJKB_01353 at 1396.280 kb on - strand, within OHPLBJKB_01353 at 1396.402 kb on - strand, within OHPLBJKB_01353 at 1396.424 kb on - strand, within OHPLBJKB_01353 at 1396.478 kb on + strand, within OHPLBJKB_01353 at 1396.514 kb on + strand, within OHPLBJKB_01353 at 1396.515 kb on - strand, within OHPLBJKB_01353 at 1396.534 kb on - strand, within OHPLBJKB_01353 at 1396.536 kb on - strand, within OHPLBJKB_01353 at 1396.657 kb on + strand, within OHPLBJKB_01353 at 1396.680 kb on - strand, within OHPLBJKB_01353 at 1396.682 kb on + strand, within OHPLBJKB_01353 at 1396.682 kb on + strand, within OHPLBJKB_01353 at 1396.682 kb on + strand, within OHPLBJKB_01353 at 1396.768 kb on + strand, within OHPLBJKB_01353 at 1396.769 kb on - strand, within OHPLBJKB_01353 at 1396.876 kb on + strand, within OHPLBJKB_01353 at 1396.892 kb on + strand, within OHPLBJKB_01353 at 1396.892 kb on + strand, within OHPLBJKB_01353 at 1396.893 kb on - strand, within OHPLBJKB_01353 at 1396.893 kb on - strand, within OHPLBJKB_01353 at 1396.962 kb on + strand at 1396.964 kb on + strand at 1397.012 kb on + strand at 1397.056 kb on + strand at 1397.150 kb on - strand at 1397.176 kb on - strand at 1397.284 kb on - strand, within OHPLBJKB_01354 at 1397.292 kb on + strand, within OHPLBJKB_01354 at 1397.683 kb on - strand, within OHPLBJKB_01354 at 1397.926 kb on + strand, within OHPLBJKB_01354 at 1397.960 kb on - strand, within OHPLBJKB_01354 at 1397.960 kb on - strand, within OHPLBJKB_01354 at 1398.145 kb on + strand, within OHPLBJKB_01354 at 1398.146 kb on - strand, within OHPLBJKB_01354 at 1398.202 kb on - strand, within OHPLBJKB_01354 at 1398.413 kb on + strand, within OHPLBJKB_01354 at 1398.414 kb on - strand, within OHPLBJKB_01354 at 1398.414 kb on - strand, within OHPLBJKB_01354 at 1398.520 kb on + strand at 1398.525 kb on + strand at 1398.526 kb on - strand at 1398.530 kb on - strand at 1398.587 kb on + strand at 1398.603 kb on + strand at 1398.625 kb on + strand at 1398.625 kb on + strand at 1398.625 kb on + strand at 1398.626 kb on - strand at 1398.626 kb on - strand at 1398.689 kb on + strand at 1398.690 kb on - strand at 1398.710 kb on + strand at 1398.817 kb on + strand at 1398.818 kb on - strand at 1398.879 kb on + strand, within OHPLBJKB_01355 at 1398.880 kb on - strand, within OHPLBJKB_01355 at 1398.914 kb on + strand, within OHPLBJKB_01355 at 1398.915 kb on - strand, within OHPLBJKB_01355 at 1398.915 kb on - strand, within OHPLBJKB_01355 at 1398.915 kb on - strand, within OHPLBJKB_01355 at 1398.915 kb on - strand, within OHPLBJKB_01355 at 1398.915 kb on - strand, within OHPLBJKB_01355 at 1398.938 kb on + strand, within OHPLBJKB_01355 at 1398.938 kb on + strand, within OHPLBJKB_01355 at 1398.938 kb on + strand, within OHPLBJKB_01355 at 1398.939 kb on - strand, within OHPLBJKB_01355 at 1399.086 kb on + strand, within OHPLBJKB_01355 at 1399.086 kb on + strand, within OHPLBJKB_01355 at 1399.086 kb on + strand, within OHPLBJKB_01355 at 1399.086 kb on + strand, within OHPLBJKB_01355 at 1399.086 kb on + strand, within OHPLBJKB_01355 at 1399.086 kb on + strand, within OHPLBJKB_01355 at 1399.087 kb on - strand, within OHPLBJKB_01355 at 1399.087 kb on - strand, within OHPLBJKB_01355 at 1399.087 kb on - strand, within OHPLBJKB_01355 at 1399.087 kb on - strand, within OHPLBJKB_01355 at 1399.087 kb on - strand, within OHPLBJKB_01355 at 1399.197 kb on - strand, within OHPLBJKB_01355 at 1399.197 kb on - strand, within OHPLBJKB_01355 at 1399.255 kb on - strand, within OHPLBJKB_01355 at 1399.348 kb on - strand, within OHPLBJKB_01355 at 1399.348 kb on - strand, within OHPLBJKB_01355 at 1399.348 kb on - strand, within OHPLBJKB_01355 at 1399.374 kb on - strand, within OHPLBJKB_01355 at 1399.386 kb on - strand, within OHPLBJKB_01355 at 1399.399 kb on - strand, within OHPLBJKB_01355 at 1399.452 kb on + strand, within OHPLBJKB_01355 at 1399.453 kb on - strand, within OHPLBJKB_01355 at 1399.453 kb on - strand, within OHPLBJKB_01355 at 1399.489 kb on - strand, within OHPLBJKB_01355 at 1399.489 kb on - strand, within OHPLBJKB_01355
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 1,396,209 - OHPLBJKB_01353 0.28 -1.7 1,396,280 - OHPLBJKB_01353 0.34 -1.6 1,396,402 - OHPLBJKB_01353 0.45 +0.7 1,396,424 - OHPLBJKB_01353 0.47 +0.2 1,396,478 + OHPLBJKB_01353 0.51 -0.7 1,396,514 + OHPLBJKB_01353 0.54 -1.7 1,396,515 - OHPLBJKB_01353 0.54 -0.3 1,396,534 - OHPLBJKB_01353 0.56 +0.7 1,396,536 - OHPLBJKB_01353 0.56 +0.4 1,396,657 + OHPLBJKB_01353 0.67 +0.4 1,396,680 - OHPLBJKB_01353 0.69 +0.0 1,396,682 + OHPLBJKB_01353 0.69 +0.0 1,396,682 + OHPLBJKB_01353 0.69 +0.3 1,396,682 + OHPLBJKB_01353 0.69 +0.0 1,396,768 + OHPLBJKB_01353 0.76 -0.4 1,396,769 - OHPLBJKB_01353 0.76 +1.9 1,396,876 + OHPLBJKB_01353 0.85 +0.0 1,396,892 + OHPLBJKB_01353 0.87 +0.4 1,396,892 + OHPLBJKB_01353 0.87 +0.1 1,396,893 - OHPLBJKB_01353 0.87 -0.6 1,396,893 - OHPLBJKB_01353 0.87 +0.9 1,396,962 + +0.3 1,396,964 + +0.2 1,397,012 + +0.8 1,397,056 + -0.8 1,397,150 - -0.6 1,397,176 - +0.8 1,397,284 - OHPLBJKB_01354 0.16 -0.5 1,397,292 + OHPLBJKB_01354 0.16 -0.5 1,397,683 - OHPLBJKB_01354 0.41 -1.0 1,397,926 + OHPLBJKB_01354 0.57 -0.5 1,397,960 - OHPLBJKB_01354 0.59 -0.6 1,397,960 - OHPLBJKB_01354 0.59 -1.5 1,398,145 + OHPLBJKB_01354 0.71 -1.3 1,398,146 - OHPLBJKB_01354 0.72 -0.1 1,398,202 - OHPLBJKB_01354 0.75 +0.3 1,398,413 + OHPLBJKB_01354 0.89 -1.1 1,398,414 - OHPLBJKB_01354 0.89 -0.2 1,398,414 - OHPLBJKB_01354 0.89 -0.3 1,398,520 + +0.7 1,398,525 + -1.5 1,398,526 - -0.3 1,398,530 - -0.8 1,398,587 + -0.2 1,398,603 + +0.3 1,398,625 + -0.5 1,398,625 + -0.6 1,398,625 + -1.2 1,398,626 - -1.3 1,398,626 - -0.2 1,398,689 + -0.7 1,398,690 - -0.1 1,398,710 + -0.3 1,398,817 + -1.1 1,398,818 - +0.9 1,398,879 + OHPLBJKB_01355 0.14 +2.3 1,398,880 - OHPLBJKB_01355 0.14 -0.6 1,398,914 + OHPLBJKB_01355 0.17 +0.3 1,398,915 - OHPLBJKB_01355 0.17 +0.3 1,398,915 - OHPLBJKB_01355 0.17 -0.1 1,398,915 - OHPLBJKB_01355 0.17 -0.5 1,398,915 - OHPLBJKB_01355 0.17 +0.6 1,398,915 - OHPLBJKB_01355 0.17 -0.4 1,398,938 + OHPLBJKB_01355 0.19 -0.6 1,398,938 + OHPLBJKB_01355 0.19 +1.0 1,398,938 + OHPLBJKB_01355 0.19 -1.1 1,398,939 - OHPLBJKB_01355 0.19 +0.0 1,399,086 + OHPLBJKB_01355 0.30 +0.9 1,399,086 + OHPLBJKB_01355 0.30 +0.9 1,399,086 + OHPLBJKB_01355 0.30 +2.0 1,399,086 + OHPLBJKB_01355 0.30 +0.7 1,399,086 + OHPLBJKB_01355 0.30 +0.1 1,399,086 + OHPLBJKB_01355 0.30 +0.3 1,399,087 - OHPLBJKB_01355 0.30 +0.0 1,399,087 - OHPLBJKB_01355 0.30 +0.6 1,399,087 - OHPLBJKB_01355 0.30 +0.3 1,399,087 - OHPLBJKB_01355 0.30 -1.0 1,399,087 - OHPLBJKB_01355 0.30 -0.7 1,399,197 - OHPLBJKB_01355 0.38 -0.8 1,399,197 - OHPLBJKB_01355 0.38 +0.3 1,399,255 - OHPLBJKB_01355 0.42 -0.8 1,399,348 - OHPLBJKB_01355 0.49 +0.1 1,399,348 - OHPLBJKB_01355 0.49 +0.3 1,399,348 - OHPLBJKB_01355 0.49 -0.4 1,399,374 - OHPLBJKB_01355 0.51 +1.2 1,399,386 - OHPLBJKB_01355 0.52 -1.7 1,399,399 - OHPLBJKB_01355 0.53 +0.3 1,399,452 + OHPLBJKB_01355 0.57 +0.2 1,399,453 - OHPLBJKB_01355 0.57 -0.7 1,399,453 - OHPLBJKB_01355 0.57 -1.7 1,399,489 - OHPLBJKB_01355 0.60 +0.7 1,399,489 - OHPLBJKB_01355 0.60 +0.8
Or see this region's nucleotide sequence