Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01130 and OHPLBJKB_01131 are separated by 270 nucleotides OHPLBJKB_01131 and OHPLBJKB_01132 are separated by 131 nucleotides OHPLBJKB_01132 and OHPLBJKB_01133 overlap by 16 nucleotides
OHPLBJKB_01130: OHPLBJKB_01130 - IS110 family transposase IS621, at 1,156,809 to 1,157,789
_01130
OHPLBJKB_01131: OHPLBJKB_01131 - ATP-dependent RNA helicase SrmB, at 1,158,060 to 1,159,394
_01131
OHPLBJKB_01132: OHPLBJKB_01132 - tRNA1(Val) (adenine(37)-N6)-methyltransferase, at 1,159,526 to 1,160,263
_01132
OHPLBJKB_01133: OHPLBJKB_01133 - L-aspartate oxidase, at 1,160,248 to 1,161,870
_01133
Position (kb)
1158
1159
1160 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1157.995 kb on + strand at 1158.031 kb on + strand at 1158.031 kb on + strand at 1158.034 kb on + strand at 1158.043 kb on + strand at 1158.044 kb on - strand at 1158.201 kb on + strand, within OHPLBJKB_01131 at 1158.202 kb on - strand, within OHPLBJKB_01131 at 1158.282 kb on - strand, within OHPLBJKB_01131 at 1158.282 kb on - strand, within OHPLBJKB_01131 at 1158.297 kb on - strand, within OHPLBJKB_01131 at 1158.299 kb on - strand, within OHPLBJKB_01131 at 1158.306 kb on + strand, within OHPLBJKB_01131 at 1158.307 kb on - strand, within OHPLBJKB_01131 at 1158.362 kb on + strand, within OHPLBJKB_01131 at 1158.381 kb on - strand, within OHPLBJKB_01131 at 1158.400 kb on + strand, within OHPLBJKB_01131 at 1158.401 kb on - strand, within OHPLBJKB_01131 at 1158.401 kb on - strand, within OHPLBJKB_01131 at 1158.401 kb on - strand, within OHPLBJKB_01131 at 1158.405 kb on - strand, within OHPLBJKB_01131 at 1158.493 kb on - strand, within OHPLBJKB_01131 at 1158.546 kb on + strand, within OHPLBJKB_01131 at 1158.565 kb on + strand, within OHPLBJKB_01131 at 1158.719 kb on - strand, within OHPLBJKB_01131 at 1158.875 kb on + strand, within OHPLBJKB_01131 at 1158.875 kb on + strand, within OHPLBJKB_01131 at 1158.875 kb on + strand, within OHPLBJKB_01131 at 1158.875 kb on + strand, within OHPLBJKB_01131 at 1158.875 kb on + strand, within OHPLBJKB_01131 at 1158.875 kb on + strand, within OHPLBJKB_01131 at 1158.876 kb on - strand, within OHPLBJKB_01131 at 1158.912 kb on - strand, within OHPLBJKB_01131 at 1158.912 kb on - strand, within OHPLBJKB_01131 at 1158.912 kb on - strand, within OHPLBJKB_01131 at 1158.912 kb on - strand, within OHPLBJKB_01131 at 1158.912 kb on - strand, within OHPLBJKB_01131 at 1158.972 kb on + strand, within OHPLBJKB_01131 at 1158.972 kb on + strand, within OHPLBJKB_01131 at 1158.973 kb on - strand, within OHPLBJKB_01131 at 1158.976 kb on + strand, within OHPLBJKB_01131 at 1158.976 kb on + strand, within OHPLBJKB_01131 at 1158.976 kb on + strand, within OHPLBJKB_01131 at 1158.977 kb on - strand, within OHPLBJKB_01131 at 1158.977 kb on - strand, within OHPLBJKB_01131 at 1158.977 kb on - strand, within OHPLBJKB_01131 at 1159.046 kb on + strand, within OHPLBJKB_01131 at 1159.047 kb on - strand, within OHPLBJKB_01131 at 1159.047 kb on - strand, within OHPLBJKB_01131 at 1159.047 kb on - strand, within OHPLBJKB_01131 at 1159.048 kb on + strand, within OHPLBJKB_01131 at 1159.048 kb on + strand, within OHPLBJKB_01131 at 1159.048 kb on + strand, within OHPLBJKB_01131 at 1159.048 kb on + strand, within OHPLBJKB_01131 at 1159.048 kb on + strand, within OHPLBJKB_01131 at 1159.048 kb on + strand, within OHPLBJKB_01131 at 1159.048 kb on + strand, within OHPLBJKB_01131 at 1159.048 kb on + strand, within OHPLBJKB_01131 at 1159.048 kb on + strand, within OHPLBJKB_01131 at 1159.049 kb on - strand, within OHPLBJKB_01131 at 1159.049 kb on - strand, within OHPLBJKB_01131 at 1159.049 kb on - strand, within OHPLBJKB_01131 at 1159.049 kb on - strand, within OHPLBJKB_01131 at 1159.088 kb on + strand, within OHPLBJKB_01131 at 1159.089 kb on - strand, within OHPLBJKB_01131 at 1159.089 kb on - strand, within OHPLBJKB_01131 at 1159.089 kb on - strand, within OHPLBJKB_01131 at 1159.089 kb on - strand, within OHPLBJKB_01131 at 1159.263 kb on + strand at 1159.263 kb on + strand at 1159.399 kb on + strand at 1159.399 kb on + strand at 1159.399 kb on + strand at 1159.400 kb on - strand at 1159.400 kb on - strand at 1159.400 kb on - strand at 1159.421 kb on + strand at 1159.423 kb on + strand at 1159.424 kb on - strand at 1159.455 kb on + strand at 1159.455 kb on + strand at 1159.456 kb on - strand at 1159.537 kb on + strand at 1159.537 kb on + strand at 1159.537 kb on + strand at 1159.538 kb on - strand at 1159.538 kb on - strand at 1159.538 kb on - strand at 1159.624 kb on + strand, within OHPLBJKB_01132 at 1159.624 kb on + strand, within OHPLBJKB_01132 at 1159.705 kb on - strand, within OHPLBJKB_01132 at 1159.705 kb on - strand, within OHPLBJKB_01132 at 1159.789 kb on + strand, within OHPLBJKB_01132 at 1159.837 kb on + strand, within OHPLBJKB_01132 at 1159.898 kb on + strand, within OHPLBJKB_01132 at 1159.898 kb on + strand, within OHPLBJKB_01132 at 1159.899 kb on - strand, within OHPLBJKB_01132 at 1159.899 kb on - strand, within OHPLBJKB_01132 at 1159.899 kb on - strand, within OHPLBJKB_01132 at 1159.915 kb on - strand, within OHPLBJKB_01132 at 1159.958 kb on - strand, within OHPLBJKB_01132 at 1160.025 kb on + strand, within OHPLBJKB_01132 at 1160.070 kb on + strand, within OHPLBJKB_01132 at 1160.071 kb on - strand, within OHPLBJKB_01132 at 1160.089 kb on - strand, within OHPLBJKB_01132 at 1160.177 kb on - strand, within OHPLBJKB_01132 at 1160.214 kb on - strand at 1160.214 kb on - strand at 1160.214 kb on - strand at 1160.214 kb on - strand at 1160.225 kb on + strand at 1160.225 kb on + strand at 1160.225 kb on + strand at 1160.226 kb on - strand at 1160.226 kb on - strand at 1160.257 kb on + strand at 1160.257 kb on + strand at 1160.258 kb on - strand at 1160.261 kb on + strand at 1160.261 kb on + strand at 1160.261 kb on + strand at 1160.262 kb on - strand at 1160.389 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 1,157,995 + -1.1 1,158,031 + +0.5 1,158,031 + +0.6 1,158,034 + -0.1 1,158,043 + -0.5 1,158,044 - +0.4 1,158,201 + OHPLBJKB_01131 0.11 -0.6 1,158,202 - OHPLBJKB_01131 0.11 +1.1 1,158,282 - OHPLBJKB_01131 0.17 -1.7 1,158,282 - OHPLBJKB_01131 0.17 -0.7 1,158,297 - OHPLBJKB_01131 0.18 -1.2 1,158,299 - OHPLBJKB_01131 0.18 -0.6 1,158,306 + OHPLBJKB_01131 0.18 -0.3 1,158,307 - OHPLBJKB_01131 0.19 -1.6 1,158,362 + OHPLBJKB_01131 0.23 -0.0 1,158,381 - OHPLBJKB_01131 0.24 -2.1 1,158,400 + OHPLBJKB_01131 0.25 +0.3 1,158,401 - OHPLBJKB_01131 0.26 -0.3 1,158,401 - OHPLBJKB_01131 0.26 -2.3 1,158,401 - OHPLBJKB_01131 0.26 -1.1 1,158,405 - OHPLBJKB_01131 0.26 +0.3 1,158,493 - OHPLBJKB_01131 0.32 +0.3 1,158,546 + OHPLBJKB_01131 0.36 -0.3 1,158,565 + OHPLBJKB_01131 0.38 +1.8 1,158,719 - OHPLBJKB_01131 0.49 +0.7 1,158,875 + OHPLBJKB_01131 0.61 +0.8 1,158,875 + OHPLBJKB_01131 0.61 -0.3 1,158,875 + OHPLBJKB_01131 0.61 -1.7 1,158,875 + OHPLBJKB_01131 0.61 -2.2 1,158,875 + OHPLBJKB_01131 0.61 -0.6 1,158,875 + OHPLBJKB_01131 0.61 -0.7 1,158,876 - OHPLBJKB_01131 0.61 -0.3 1,158,912 - OHPLBJKB_01131 0.64 -1.7 1,158,912 - OHPLBJKB_01131 0.64 -1.3 1,158,912 - OHPLBJKB_01131 0.64 -1.1 1,158,912 - OHPLBJKB_01131 0.64 -2.3 1,158,912 - OHPLBJKB_01131 0.64 +1.8 1,158,972 + OHPLBJKB_01131 0.68 -0.1 1,158,972 + OHPLBJKB_01131 0.68 +0.5 1,158,973 - OHPLBJKB_01131 0.68 -0.7 1,158,976 + OHPLBJKB_01131 0.69 -1.8 1,158,976 + OHPLBJKB_01131 0.69 -0.3 1,158,976 + OHPLBJKB_01131 0.69 -0.7 1,158,977 - OHPLBJKB_01131 0.69 -0.7 1,158,977 - OHPLBJKB_01131 0.69 -1.7 1,158,977 - OHPLBJKB_01131 0.69 -1.3 1,159,046 + OHPLBJKB_01131 0.74 -2.8 1,159,047 - OHPLBJKB_01131 0.74 -1.6 1,159,047 - OHPLBJKB_01131 0.74 +1.0 1,159,047 - OHPLBJKB_01131 0.74 -0.9 1,159,048 + OHPLBJKB_01131 0.74 +0.5 1,159,048 + OHPLBJKB_01131 0.74 -1.2 1,159,048 + OHPLBJKB_01131 0.74 -0.7 1,159,048 + OHPLBJKB_01131 0.74 -0.2 1,159,048 + OHPLBJKB_01131 0.74 -1.3 1,159,048 + OHPLBJKB_01131 0.74 -1.6 1,159,048 + OHPLBJKB_01131 0.74 -1.2 1,159,048 + OHPLBJKB_01131 0.74 -2.4 1,159,048 + OHPLBJKB_01131 0.74 -2.1 1,159,049 - OHPLBJKB_01131 0.74 -1.2 1,159,049 - OHPLBJKB_01131 0.74 +1.3 1,159,049 - OHPLBJKB_01131 0.74 +0.8 1,159,049 - OHPLBJKB_01131 0.74 -1.8 1,159,088 + OHPLBJKB_01131 0.77 -2.4 1,159,089 - OHPLBJKB_01131 0.77 -1.6 1,159,089 - OHPLBJKB_01131 0.77 -1.3 1,159,089 - OHPLBJKB_01131 0.77 +1.3 1,159,089 - OHPLBJKB_01131 0.77 -1.1 1,159,263 + -1.9 1,159,263 + -0.3 1,159,399 + -1.7 1,159,399 + -1.3 1,159,399 + +0.0 1,159,400 - +0.6 1,159,400 - -0.1 1,159,400 - -1.1 1,159,421 + -0.3 1,159,423 + +0.7 1,159,424 - -0.5 1,159,455 + -0.4 1,159,455 + -0.4 1,159,456 - +0.7 1,159,537 + +0.7 1,159,537 + +0.1 1,159,537 + +0.4 1,159,538 - +0.2 1,159,538 - -0.2 1,159,538 - -1.0 1,159,624 + OHPLBJKB_01132 0.13 -1.0 1,159,624 + OHPLBJKB_01132 0.13 -0.0 1,159,705 - OHPLBJKB_01132 0.24 +0.3 1,159,705 - OHPLBJKB_01132 0.24 -1.7 1,159,789 + OHPLBJKB_01132 0.36 -1.0 1,159,837 + OHPLBJKB_01132 0.42 +0.3 1,159,898 + OHPLBJKB_01132 0.50 +0.1 1,159,898 + OHPLBJKB_01132 0.50 +0.9 1,159,899 - OHPLBJKB_01132 0.51 -0.1 1,159,899 - OHPLBJKB_01132 0.51 -0.4 1,159,899 - OHPLBJKB_01132 0.51 +0.9 1,159,915 - OHPLBJKB_01132 0.53 -0.0 1,159,958 - OHPLBJKB_01132 0.59 +0.3 1,160,025 + OHPLBJKB_01132 0.68 -0.6 1,160,070 + OHPLBJKB_01132 0.74 -0.2 1,160,071 - OHPLBJKB_01132 0.74 -2.3 1,160,089 - OHPLBJKB_01132 0.76 -0.3 1,160,177 - OHPLBJKB_01132 0.88 -0.0 1,160,214 - -0.5 1,160,214 - -0.1 1,160,214 - +0.7 1,160,214 - -1.7 1,160,225 + +0.7 1,160,225 + -0.4 1,160,225 + -2.6 1,160,226 - +0.5 1,160,226 - +1.4 1,160,257 + -0.3 1,160,257 + -0.1 1,160,258 - -1.3 1,160,261 + -0.4 1,160,261 + -0.8 1,160,261 + +0.8 1,160,262 - +1.0 1,160,389 + -0.5
Or see this region's nucleotide sequence