Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01033 and OHPLBJKB_01034 are separated by 144 nucleotides OHPLBJKB_01034 and OHPLBJKB_01035 are separated by 79 nucleotides OHPLBJKB_01035 and OHPLBJKB_01036 are separated by 68 nucleotides OHPLBJKB_01036 and OHPLBJKB_01037 are separated by 127 nucleotides
OHPLBJKB_01033: OHPLBJKB_01033 - Membrane-bound lytic murein transglycosylase B, at 1,067,803 to 1,068,993
_01033
OHPLBJKB_01034: OHPLBJKB_01034 - Nicotinamide-nucleotide amidohydrolase PncC, at 1,069,138 to 1,069,635
_01034
OHPLBJKB_01035: OHPLBJKB_01035 - Protein RecA, at 1,069,715 to 1,070,776
_01035
OHPLBJKB_01036: OHPLBJKB_01036 - Regulatory protein RecX, at 1,070,845 to 1,071,345
_01036
OHPLBJKB_01037: OHPLBJKB_01037 - Alanine--tRNA ligase, at 1,071,473 to 1,074,103
_01037
Position (kb)
1069
1070
1071 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1068.771 kb on + strand, within OHPLBJKB_01033 at 1068.771 kb on + strand, within OHPLBJKB_01033 at 1068.771 kb on + strand, within OHPLBJKB_01033 at 1068.772 kb on - strand, within OHPLBJKB_01033 at 1068.772 kb on - strand, within OHPLBJKB_01033 at 1068.772 kb on - strand, within OHPLBJKB_01033 at 1068.772 kb on - strand, within OHPLBJKB_01033 at 1068.772 kb on - strand, within OHPLBJKB_01033 at 1068.772 kb on - strand, within OHPLBJKB_01033 at 1068.775 kb on + strand, within OHPLBJKB_01033 at 1068.775 kb on + strand, within OHPLBJKB_01033 at 1068.776 kb on - strand, within OHPLBJKB_01033 at 1068.776 kb on - strand, within OHPLBJKB_01033 at 1068.776 kb on - strand, within OHPLBJKB_01033 at 1068.807 kb on - strand, within OHPLBJKB_01033 at 1068.904 kb on + strand at 1068.904 kb on + strand at 1068.904 kb on + strand at 1068.905 kb on - strand at 1068.905 kb on - strand at 1068.905 kb on - strand at 1068.959 kb on + strand at 1068.960 kb on - strand at 1068.960 kb on - strand at 1068.960 kb on - strand at 1068.960 kb on - strand at 1068.986 kb on + strand at 1068.986 kb on + strand at 1068.986 kb on + strand at 1068.986 kb on + strand at 1068.987 kb on - strand at 1068.987 kb on - strand at 1068.987 kb on - strand at 1068.991 kb on + strand at 1068.991 kb on + strand at 1068.991 kb on + strand at 1068.991 kb on + strand at 1068.991 kb on + strand at 1068.991 kb on + strand at 1068.992 kb on - strand at 1068.992 kb on - strand at 1068.992 kb on - strand at 1068.992 kb on - strand at 1068.992 kb on - strand at 1068.992 kb on - strand at 1068.995 kb on + strand at 1068.995 kb on + strand at 1068.995 kb on + strand at 1068.995 kb on + strand at 1068.996 kb on - strand at 1068.996 kb on - strand at 1068.996 kb on - strand at 1068.996 kb on - strand at 1068.996 kb on - strand at 1068.996 kb on - strand at 1068.996 kb on - strand at 1068.996 kb on - strand at 1068.999 kb on + strand at 1068.999 kb on + strand at 1069.000 kb on - strand at 1069.098 kb on + strand at 1069.098 kb on + strand at 1069.098 kb on + strand at 1069.099 kb on - strand at 1069.164 kb on - strand at 1069.164 kb on - strand at 1069.208 kb on + strand, within OHPLBJKB_01034 at 1069.208 kb on + strand, within OHPLBJKB_01034 at 1069.227 kb on + strand, within OHPLBJKB_01034 at 1069.254 kb on + strand, within OHPLBJKB_01034 at 1069.303 kb on + strand, within OHPLBJKB_01034 at 1069.303 kb on + strand, within OHPLBJKB_01034 at 1069.303 kb on + strand, within OHPLBJKB_01034 at 1069.303 kb on + strand, within OHPLBJKB_01034 at 1069.304 kb on - strand, within OHPLBJKB_01034 at 1069.304 kb on - strand, within OHPLBJKB_01034 at 1069.304 kb on - strand, within OHPLBJKB_01034 at 1069.304 kb on - strand, within OHPLBJKB_01034 at 1069.304 kb on - strand, within OHPLBJKB_01034 at 1069.304 kb on - strand, within OHPLBJKB_01034 at 1069.304 kb on - strand, within OHPLBJKB_01034 at 1069.304 kb on - strand, within OHPLBJKB_01034 at 1069.429 kb on + strand, within OHPLBJKB_01034 at 1069.440 kb on + strand, within OHPLBJKB_01034 at 1069.440 kb on + strand, within OHPLBJKB_01034 at 1069.441 kb on - strand, within OHPLBJKB_01034 at 1069.441 kb on - strand, within OHPLBJKB_01034 at 1069.441 kb on - strand, within OHPLBJKB_01034 at 1069.441 kb on - strand, within OHPLBJKB_01034 at 1069.443 kb on + strand, within OHPLBJKB_01034 at 1069.444 kb on - strand, within OHPLBJKB_01034 at 1069.444 kb on - strand, within OHPLBJKB_01034 at 1069.592 kb on - strand at 1069.592 kb on - strand at 1069.592 kb on - strand at 1069.622 kb on + strand at 1069.675 kb on + strand at 1069.675 kb on + strand at 1069.676 kb on - strand at 1069.689 kb on + strand at 1070.024 kb on + strand, within OHPLBJKB_01035 at 1070.224 kb on + strand, within OHPLBJKB_01035 at 1070.225 kb on - strand, within OHPLBJKB_01035 at 1070.225 kb on - strand, within OHPLBJKB_01035 at 1070.245 kb on + strand, within OHPLBJKB_01035 at 1070.370 kb on - strand, within OHPLBJKB_01035 at 1070.370 kb on - strand, within OHPLBJKB_01035 at 1070.518 kb on + strand, within OHPLBJKB_01035 at 1070.594 kb on + strand, within OHPLBJKB_01035 at 1070.595 kb on - strand, within OHPLBJKB_01035 at 1070.650 kb on + strand, within OHPLBJKB_01035 at 1070.685 kb on + strand at 1070.685 kb on + strand at 1070.685 kb on + strand at 1070.685 kb on + strand at 1070.733 kb on + strand at 1070.733 kb on + strand at 1070.733 kb on + strand at 1070.733 kb on + strand at 1070.734 kb on - strand at 1070.740 kb on + strand at 1070.762 kb on - strand at 1070.774 kb on + strand at 1070.790 kb on + strand at 1070.791 kb on - strand at 1070.791 kb on - strand at 1070.826 kb on + strand at 1070.827 kb on - strand at 1070.827 kb on - strand at 1070.827 kb on - strand at 1070.833 kb on + strand at 1070.834 kb on - strand at 1070.834 kb on - strand at 1070.834 kb on - strand at 1070.840 kb on - strand at 1070.875 kb on + strand at 1070.875 kb on + strand at 1070.875 kb on + strand at 1070.875 kb on + strand at 1070.875 kb on + strand at 1070.875 kb on + strand at 1070.875 kb on + strand at 1070.875 kb on + strand at 1070.876 kb on - strand at 1070.876 kb on - strand at 1070.901 kb on - strand, within OHPLBJKB_01036 at 1070.946 kb on + strand, within OHPLBJKB_01036 at 1070.947 kb on - strand, within OHPLBJKB_01036 at 1071.011 kb on - strand, within OHPLBJKB_01036 at 1071.011 kb on - strand, within OHPLBJKB_01036 at 1071.046 kb on + strand, within OHPLBJKB_01036 at 1071.046 kb on + strand, within OHPLBJKB_01036 at 1071.047 kb on - strand, within OHPLBJKB_01036 at 1071.047 kb on - strand, within OHPLBJKB_01036 at 1071.090 kb on + strand, within OHPLBJKB_01036 at 1071.104 kb on - strand, within OHPLBJKB_01036 at 1071.144 kb on + strand, within OHPLBJKB_01036 at 1071.144 kb on + strand, within OHPLBJKB_01036 at 1071.144 kb on + strand, within OHPLBJKB_01036 at 1071.144 kb on + strand, within OHPLBJKB_01036 at 1071.145 kb on - strand, within OHPLBJKB_01036 at 1071.145 kb on - strand, within OHPLBJKB_01036 at 1071.145 kb on - strand, within OHPLBJKB_01036 at 1071.145 kb on - strand, within OHPLBJKB_01036 at 1071.145 kb on - strand, within OHPLBJKB_01036 at 1071.229 kb on + strand, within OHPLBJKB_01036 at 1071.229 kb on + strand, within OHPLBJKB_01036 at 1071.230 kb on - strand, within OHPLBJKB_01036 at 1071.268 kb on - strand, within OHPLBJKB_01036 at 1071.268 kb on - strand, within OHPLBJKB_01036 at 1071.298 kb on + strand at 1071.312 kb on + strand at 1071.312 kb on + strand at 1071.313 kb on - strand at 1071.313 kb on - strand at 1071.352 kb on - strand at 1071.356 kb on + strand at 1071.357 kb on - strand at 1071.357 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 1,068,771 + OHPLBJKB_01033 0.81 +1.3 1,068,771 + OHPLBJKB_01033 0.81 +1.7 1,068,771 + OHPLBJKB_01033 0.81 -0.7 1,068,772 - OHPLBJKB_01033 0.81 -2.1 1,068,772 - OHPLBJKB_01033 0.81 -0.4 1,068,772 - OHPLBJKB_01033 0.81 +0.5 1,068,772 - OHPLBJKB_01033 0.81 +0.3 1,068,772 - OHPLBJKB_01033 0.81 +0.5 1,068,772 - OHPLBJKB_01033 0.81 -0.2 1,068,775 + OHPLBJKB_01033 0.82 +0.2 1,068,775 + OHPLBJKB_01033 0.82 +0.5 1,068,776 - OHPLBJKB_01033 0.82 -0.4 1,068,776 - OHPLBJKB_01033 0.82 -0.1 1,068,776 - OHPLBJKB_01033 0.82 +0.3 1,068,807 - OHPLBJKB_01033 0.84 -0.1 1,068,904 + -0.9 1,068,904 + +0.1 1,068,904 + -0.1 1,068,905 - -0.6 1,068,905 - -1.0 1,068,905 - +0.8 1,068,959 + +0.5 1,068,960 - +0.4 1,068,960 - +0.3 1,068,960 - -1.1 1,068,960 - +2.1 1,068,986 + -0.3 1,068,986 + +0.2 1,068,986 + +0.3 1,068,986 + +0.3 1,068,987 - +1.1 1,068,987 - -0.3 1,068,987 - -0.9 1,068,991 + -0.2 1,068,991 + -0.2 1,068,991 + +2.3 1,068,991 + -0.0 1,068,991 + +0.1 1,068,991 + +1.3 1,068,992 - +0.3 1,068,992 - -0.5 1,068,992 - -0.7 1,068,992 - +1.7 1,068,992 - -0.6 1,068,992 - +0.7 1,068,995 + +0.3 1,068,995 + +0.2 1,068,995 + +0.2 1,068,995 + +0.3 1,068,996 - +0.5 1,068,996 - -0.6 1,068,996 - +0.7 1,068,996 - -0.9 1,068,996 - +0.4 1,068,996 - +0.4 1,068,996 - -0.5 1,068,996 - -0.8 1,068,999 + +0.7 1,068,999 + -0.7 1,069,000 - -1.4 1,069,098 + +0.3 1,069,098 + +0.7 1,069,098 + -0.2 1,069,099 - -0.2 1,069,164 - -0.3 1,069,164 - -0.9 1,069,208 + OHPLBJKB_01034 0.14 -0.4 1,069,208 + OHPLBJKB_01034 0.14 +0.2 1,069,227 + OHPLBJKB_01034 0.18 +0.3 1,069,254 + OHPLBJKB_01034 0.23 +0.4 1,069,303 + OHPLBJKB_01034 0.33 -0.1 1,069,303 + OHPLBJKB_01034 0.33 +0.3 1,069,303 + OHPLBJKB_01034 0.33 -0.3 1,069,303 + OHPLBJKB_01034 0.33 +0.7 1,069,304 - OHPLBJKB_01034 0.33 +0.1 1,069,304 - OHPLBJKB_01034 0.33 +0.5 1,069,304 - OHPLBJKB_01034 0.33 -0.1 1,069,304 - OHPLBJKB_01034 0.33 +0.1 1,069,304 - OHPLBJKB_01034 0.33 -0.3 1,069,304 - OHPLBJKB_01034 0.33 -1.1 1,069,304 - OHPLBJKB_01034 0.33 -0.1 1,069,304 - OHPLBJKB_01034 0.33 +0.4 1,069,429 + OHPLBJKB_01034 0.58 -0.1 1,069,440 + OHPLBJKB_01034 0.61 -0.5 1,069,440 + OHPLBJKB_01034 0.61 -0.7 1,069,441 - OHPLBJKB_01034 0.61 -0.1 1,069,441 - OHPLBJKB_01034 0.61 +0.4 1,069,441 - OHPLBJKB_01034 0.61 +0.4 1,069,441 - OHPLBJKB_01034 0.61 +0.0 1,069,443 + OHPLBJKB_01034 0.61 -0.1 1,069,444 - OHPLBJKB_01034 0.61 -0.2 1,069,444 - OHPLBJKB_01034 0.61 +0.5 1,069,592 - -0.5 1,069,592 - -1.2 1,069,592 - +0.3 1,069,622 + +0.0 1,069,675 + -1.6 1,069,675 + -1.1 1,069,676 - -1.1 1,069,689 + -0.7 1,070,024 + OHPLBJKB_01035 0.29 -0.1 1,070,224 + OHPLBJKB_01035 0.48 -1.1 1,070,225 - OHPLBJKB_01035 0.48 +1.3 1,070,225 - OHPLBJKB_01035 0.48 -1.1 1,070,245 + OHPLBJKB_01035 0.50 -1.1 1,070,370 - OHPLBJKB_01035 0.62 -0.7 1,070,370 - OHPLBJKB_01035 0.62 -1.3 1,070,518 + OHPLBJKB_01035 0.76 +0.7 1,070,594 + OHPLBJKB_01035 0.83 -0.3 1,070,595 - OHPLBJKB_01035 0.83 -1.1 1,070,650 + OHPLBJKB_01035 0.88 -1.3 1,070,685 + -0.4 1,070,685 + -1.2 1,070,685 + -3.1 1,070,685 + +0.3 1,070,733 + -1.7 1,070,733 + +0.6 1,070,733 + -0.9 1,070,733 + +0.3 1,070,734 - -1.1 1,070,740 + -0.2 1,070,762 - -0.7 1,070,774 + +1.3 1,070,790 + -0.6 1,070,791 - -1.7 1,070,791 - -0.1 1,070,826 + +0.4 1,070,827 - -0.6 1,070,827 - -0.3 1,070,827 - +0.5 1,070,833 + +0.8 1,070,834 - +0.1 1,070,834 - -0.8 1,070,834 - -0.1 1,070,840 - +1.0 1,070,875 + -0.4 1,070,875 + +0.3 1,070,875 + -0.3 1,070,875 + -1.9 1,070,875 + -0.4 1,070,875 + -0.1 1,070,875 + +0.3 1,070,875 + +0.3 1,070,876 - +0.2 1,070,876 - +1.6 1,070,901 - OHPLBJKB_01036 0.11 +0.4 1,070,946 + OHPLBJKB_01036 0.20 -1.3 1,070,947 - OHPLBJKB_01036 0.20 -0.5 1,071,011 - OHPLBJKB_01036 0.33 +1.3 1,071,011 - OHPLBJKB_01036 0.33 -0.2 1,071,046 + OHPLBJKB_01036 0.40 -0.6 1,071,046 + OHPLBJKB_01036 0.40 +0.6 1,071,047 - OHPLBJKB_01036 0.40 +0.3 1,071,047 - OHPLBJKB_01036 0.40 -0.5 1,071,090 + OHPLBJKB_01036 0.49 +0.4 1,071,104 - OHPLBJKB_01036 0.52 -0.0 1,071,144 + OHPLBJKB_01036 0.60 -0.7 1,071,144 + OHPLBJKB_01036 0.60 -1.1 1,071,144 + OHPLBJKB_01036 0.60 -0.5 1,071,144 + OHPLBJKB_01036 0.60 +0.4 1,071,145 - OHPLBJKB_01036 0.60 +0.3 1,071,145 - OHPLBJKB_01036 0.60 -0.7 1,071,145 - OHPLBJKB_01036 0.60 -0.5 1,071,145 - OHPLBJKB_01036 0.60 +0.4 1,071,145 - OHPLBJKB_01036 0.60 -0.3 1,071,229 + OHPLBJKB_01036 0.77 -1.3 1,071,229 + OHPLBJKB_01036 0.77 -0.7 1,071,230 - OHPLBJKB_01036 0.77 -0.1 1,071,268 - OHPLBJKB_01036 0.84 +0.2 1,071,268 - OHPLBJKB_01036 0.84 -0.9 1,071,298 + +0.3 1,071,312 + -1.6 1,071,312 + -0.4 1,071,313 - +0.1 1,071,313 - -0.4 1,071,352 - +0.8 1,071,356 + +1.3 1,071,357 - +0.8 1,071,357 - -1.7
Or see this region's nucleotide sequence