Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00881 and OHPLBJKB_00882 are separated by 120 nucleotides OHPLBJKB_00882 and OHPLBJKB_00883 are separated by 81 nucleotides
OHPLBJKB_00881: OHPLBJKB_00881 - hypothetical protein, at 903,269 to 904,078
_00881
OHPLBJKB_00882: OHPLBJKB_00882 - hypothetical protein, at 904,199 to 904,330
_00882
OHPLBJKB_00883: OHPLBJKB_00883 - hypothetical protein, at 904,412 to 905,044
_00883
Position (kb) 904
905 Strain fitness (log2 ratio) -2
-1
0
1 at 903.413 kb on - strand, within OHPLBJKB_00881 at 903.553 kb on + strand, within OHPLBJKB_00881 at 903.609 kb on - strand, within OHPLBJKB_00881 at 903.622 kb on + strand, within OHPLBJKB_00881 at 903.715 kb on + strand, within OHPLBJKB_00881 at 903.737 kb on + strand, within OHPLBJKB_00881 at 903.758 kb on - strand, within OHPLBJKB_00881 at 903.818 kb on - strand, within OHPLBJKB_00881 at 903.865 kb on - strand, within OHPLBJKB_00881 at 903.866 kb on + strand, within OHPLBJKB_00881 at 903.867 kb on - strand, within OHPLBJKB_00881 at 903.867 kb on - strand, within OHPLBJKB_00881 at 903.867 kb on - strand, within OHPLBJKB_00881 at 903.867 kb on - strand, within OHPLBJKB_00881 at 903.874 kb on + strand, within OHPLBJKB_00881 at 903.874 kb on + strand, within OHPLBJKB_00881 at 903.875 kb on - strand, within OHPLBJKB_00881 at 903.889 kb on + strand, within OHPLBJKB_00881 at 903.889 kb on + strand, within OHPLBJKB_00881 at 903.889 kb on + strand, within OHPLBJKB_00881 at 903.956 kb on + strand, within OHPLBJKB_00881 at 903.956 kb on + strand, within OHPLBJKB_00881 at 903.956 kb on + strand, within OHPLBJKB_00881 at 903.957 kb on - strand, within OHPLBJKB_00881 at 904.000 kb on + strand at 904.001 kb on - strand at 904.012 kb on + strand at 904.012 kb on + strand at 904.026 kb on - strand at 904.026 kb on - strand at 904.094 kb on - strand at 904.118 kb on + strand at 904.119 kb on - strand at 904.142 kb on + strand at 904.143 kb on - strand at 904.154 kb on - strand at 904.154 kb on - strand at 904.155 kb on + strand at 904.156 kb on - strand at 904.156 kb on - strand at 904.157 kb on + strand at 904.169 kb on - strand at 904.310 kb on + strand, within OHPLBJKB_00882 at 904.314 kb on - strand, within OHPLBJKB_00882 at 904.352 kb on + strand at 904.451 kb on + strand at 904.452 kb on - strand at 904.502 kb on - strand, within OHPLBJKB_00883 at 904.721 kb on - strand, within OHPLBJKB_00883 at 904.890 kb on - strand, within OHPLBJKB_00883 at 904.904 kb on - strand, within OHPLBJKB_00883 at 904.931 kb on - strand, within OHPLBJKB_00883 at 904.953 kb on + strand, within OHPLBJKB_00883 at 905.069 kb on + strand at 905.277 kb on + strand at 905.282 kb on - strand at 905.315 kb on - strand at 905.315 kb on - strand at 905.327 kb on + strand at 905.327 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 903,413 - OHPLBJKB_00881 0.18 +0.3 903,553 + OHPLBJKB_00881 0.35 -0.3 903,609 - OHPLBJKB_00881 0.42 -0.3 903,622 + OHPLBJKB_00881 0.44 +0.3 903,715 + OHPLBJKB_00881 0.55 +0.3 903,737 + OHPLBJKB_00881 0.58 -0.7 903,758 - OHPLBJKB_00881 0.60 -1.8 903,818 - OHPLBJKB_00881 0.68 -0.7 903,865 - OHPLBJKB_00881 0.74 +0.1 903,866 + OHPLBJKB_00881 0.74 -0.9 903,867 - OHPLBJKB_00881 0.74 +0.9 903,867 - OHPLBJKB_00881 0.74 +1.3 903,867 - OHPLBJKB_00881 0.74 -1.1 903,867 - OHPLBJKB_00881 0.74 +0.1 903,874 + OHPLBJKB_00881 0.75 +1.0 903,874 + OHPLBJKB_00881 0.75 +0.6 903,875 - OHPLBJKB_00881 0.75 +0.3 903,889 + OHPLBJKB_00881 0.77 -0.5 903,889 + OHPLBJKB_00881 0.77 -0.6 903,889 + OHPLBJKB_00881 0.77 -0.5 903,956 + OHPLBJKB_00881 0.85 -0.3 903,956 + OHPLBJKB_00881 0.85 +1.0 903,956 + OHPLBJKB_00881 0.85 +0.1 903,957 - OHPLBJKB_00881 0.85 -1.1 904,000 + -0.9 904,001 - +0.1 904,012 + +1.3 904,012 + +1.6 904,026 - -0.3 904,026 - -0.6 904,094 - -0.6 904,118 + +0.2 904,119 - -0.4 904,142 + -1.0 904,143 - +0.5 904,154 - -0.4 904,154 - +0.5 904,155 + +0.7 904,156 - -0.0 904,156 - +1.1 904,157 + +1.0 904,169 - +1.3 904,310 + OHPLBJKB_00882 0.84 -1.4 904,314 - OHPLBJKB_00882 0.87 -0.4 904,352 + +0.5 904,451 + +0.0 904,452 - +0.5 904,502 - OHPLBJKB_00883 0.14 +0.6 904,721 - OHPLBJKB_00883 0.49 +0.1 904,890 - OHPLBJKB_00883 0.76 +1.0 904,904 - OHPLBJKB_00883 0.78 -0.2 904,931 - OHPLBJKB_00883 0.82 -1.0 904,953 + OHPLBJKB_00883 0.85 -1.2 905,069 + -0.7 905,277 + +0.2 905,282 - +0.3 905,315 - +0.9 905,315 - -2.0 905,327 + -0.2 905,327 + -2.4
Or see this region's nucleotide sequence