Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_00809

Experiment: Control_HSF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_00808 and OHPLBJKB_00809 are separated by 22 nucleotidesOHPLBJKB_00809 and OHPLBJKB_00810 are separated by 446 nucleotides OHPLBJKB_00808: OHPLBJKB_00808 - 2-octaprenyl-6-methoxyphenol hydroxylase, at 829,872 to 831,050 _00808 OHPLBJKB_00809: OHPLBJKB_00809 - 2-octaprenylphenol hydroxylase, at 831,073 to 832,275 _00809 OHPLBJKB_00810: OHPLBJKB_00810 - Aminomethyltransferase, at 832,722 to 833,816 _00810 Position (kb) 831 832 833Strain fitness (log2 ratio) -2 -1 0 1 2at 830.992 kb on + strandat 831.090 kb on - strandat 831.090 kb on - strandat 831.090 kb on - strandat 831.090 kb on - strandat 831.252 kb on - strand, within OHPLBJKB_00809at 831.374 kb on - strand, within OHPLBJKB_00809at 831.374 kb on - strand, within OHPLBJKB_00809at 831.476 kb on + strand, within OHPLBJKB_00809at 831.477 kb on - strand, within OHPLBJKB_00809at 831.570 kb on + strand, within OHPLBJKB_00809at 831.571 kb on - strand, within OHPLBJKB_00809at 831.571 kb on - strand, within OHPLBJKB_00809at 831.571 kb on - strand, within OHPLBJKB_00809at 831.819 kb on - strand, within OHPLBJKB_00809at 831.823 kb on - strand, within OHPLBJKB_00809at 831.848 kb on + strand, within OHPLBJKB_00809at 831.848 kb on + strand, within OHPLBJKB_00809at 831.849 kb on - strand, within OHPLBJKB_00809at 832.064 kb on - strand, within OHPLBJKB_00809at 832.119 kb on + strand, within OHPLBJKB_00809at 832.120 kb on - strand, within OHPLBJKB_00809at 832.295 kb on + strandat 832.296 kb on - strandat 832.296 kb on - strandat 832.359 kb on + strandat 832.365 kb on - strandat 832.387 kb on + strandat 832.397 kb on - strandat 832.465 kb on + strandat 832.552 kb on - strandat 832.552 kb on - strandat 832.556 kb on + strandat 832.556 kb on + strandat 832.557 kb on - strandat 832.574 kb on + strandat 832.574 kb on + strandat 832.575 kb on - strandat 832.579 kb on + strandat 832.604 kb on + strandat 832.605 kb on - strandat 832.743 kb on + strandat 832.744 kb on - strandat 832.744 kb on - strandat 832.840 kb on + strand, within OHPLBJKB_00810at 832.841 kb on - strand, within OHPLBJKB_00810at 832.841 kb on - strand, within OHPLBJKB_00810at 832.874 kb on + strand, within OHPLBJKB_00810at 832.874 kb on + strand, within OHPLBJKB_00810at 832.874 kb on + strand, within OHPLBJKB_00810at 832.874 kb on + strand, within OHPLBJKB_00810at 832.874 kb on + strand, within OHPLBJKB_00810at 832.874 kb on + strand, within OHPLBJKB_00810at 832.874 kb on + strand, within OHPLBJKB_00810at 832.875 kb on - strand, within OHPLBJKB_00810at 832.875 kb on - strand, within OHPLBJKB_00810at 832.875 kb on - strand, within OHPLBJKB_00810at 832.875 kb on - strand, within OHPLBJKB_00810at 832.875 kb on - strand, within OHPLBJKB_00810at 832.875 kb on - strand, within OHPLBJKB_00810at 832.875 kb on - strand, within OHPLBJKB_00810at 832.975 kb on - strand, within OHPLBJKB_00810at 833.008 kb on + strand, within OHPLBJKB_00810at 833.008 kb on + strand, within OHPLBJKB_00810at 833.008 kb on + strand, within OHPLBJKB_00810at 833.008 kb on + strand, within OHPLBJKB_00810at 833.008 kb on + strand, within OHPLBJKB_00810at 833.008 kb on + strand, within OHPLBJKB_00810at 833.009 kb on - strand, within OHPLBJKB_00810at 833.009 kb on - strand, within OHPLBJKB_00810at 833.009 kb on - strand, within OHPLBJKB_00810at 833.009 kb on - strand, within OHPLBJKB_00810at 833.025 kb on + strand, within OHPLBJKB_00810at 833.028 kb on + strand, within OHPLBJKB_00810at 833.028 kb on + strand, within OHPLBJKB_00810at 833.029 kb on - strand, within OHPLBJKB_00810at 833.034 kb on - strand, within OHPLBJKB_00810at 833.060 kb on + strand, within OHPLBJKB_00810at 833.060 kb on + strand, within OHPLBJKB_00810at 833.061 kb on - strand, within OHPLBJKB_00810at 833.201 kb on + strand, within OHPLBJKB_00810

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_HSF
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830,992 + -0.3
831,090 - -0.3
831,090 - +2.6
831,090 - -0.7
831,090 - -0.9
831,252 - OHPLBJKB_00809 0.15 -0.3
831,374 - OHPLBJKB_00809 0.25 +0.6
831,374 - OHPLBJKB_00809 0.25 -0.9
831,476 + OHPLBJKB_00809 0.33 +1.3
831,477 - OHPLBJKB_00809 0.34 -0.7
831,570 + OHPLBJKB_00809 0.41 +0.3
831,571 - OHPLBJKB_00809 0.41 -1.3
831,571 - OHPLBJKB_00809 0.41 -1.7
831,571 - OHPLBJKB_00809 0.41 -1.0
831,819 - OHPLBJKB_00809 0.62 +0.7
831,823 - OHPLBJKB_00809 0.62 +2.3
831,848 + OHPLBJKB_00809 0.64 -0.8
831,848 + OHPLBJKB_00809 0.64 -0.9
831,849 - OHPLBJKB_00809 0.65 -1.0
832,064 - OHPLBJKB_00809 0.82 -0.3
832,119 + OHPLBJKB_00809 0.87 +0.9
832,120 - OHPLBJKB_00809 0.87 -0.3
832,295 + -0.0
832,296 - +0.1
832,296 - -0.5
832,359 + -0.7
832,365 - -0.8
832,387 + +0.1
832,397 - -1.9
832,465 + -0.6
832,552 - -0.9
832,552 - -0.0
832,556 + +0.7
832,556 + +0.0
832,557 - -0.8
832,574 + +0.6
832,574 + -1.7
832,575 - -0.3
832,579 + +1.1
832,604 + +0.1
832,605 - -1.3
832,743 + +0.3
832,744 - -0.3
832,744 - -0.8
832,840 + OHPLBJKB_00810 0.11 +0.8
832,841 - OHPLBJKB_00810 0.11 +0.2
832,841 - OHPLBJKB_00810 0.11 -0.6
832,874 + OHPLBJKB_00810 0.14 -0.8
832,874 + OHPLBJKB_00810 0.14 -0.4
832,874 + OHPLBJKB_00810 0.14 -0.6
832,874 + OHPLBJKB_00810 0.14 +0.5
832,874 + OHPLBJKB_00810 0.14 +0.4
832,874 + OHPLBJKB_00810 0.14 +1.8
832,874 + OHPLBJKB_00810 0.14 -0.1
832,875 - OHPLBJKB_00810 0.14 -0.3
832,875 - OHPLBJKB_00810 0.14 +0.2
832,875 - OHPLBJKB_00810 0.14 +0.2
832,875 - OHPLBJKB_00810 0.14 +0.0
832,875 - OHPLBJKB_00810 0.14 +2.3
832,875 - OHPLBJKB_00810 0.14 +0.3
832,875 - OHPLBJKB_00810 0.14 -0.6
832,975 - OHPLBJKB_00810 0.23 -0.9
833,008 + OHPLBJKB_00810 0.26 -0.2
833,008 + OHPLBJKB_00810 0.26 +1.3
833,008 + OHPLBJKB_00810 0.26 +0.7
833,008 + OHPLBJKB_00810 0.26 -1.7
833,008 + OHPLBJKB_00810 0.26 +0.2
833,008 + OHPLBJKB_00810 0.26 +2.2
833,009 - OHPLBJKB_00810 0.26 -0.4
833,009 - OHPLBJKB_00810 0.26 -1.3
833,009 - OHPLBJKB_00810 0.26 -0.0
833,009 - OHPLBJKB_00810 0.26 -1.5
833,025 + OHPLBJKB_00810 0.28 +0.7
833,028 + OHPLBJKB_00810 0.28 +0.3
833,028 + OHPLBJKB_00810 0.28 +1.3
833,029 - OHPLBJKB_00810 0.28 -1.0
833,034 - OHPLBJKB_00810 0.28 +0.1
833,060 + OHPLBJKB_00810 0.31 -0.3
833,060 + OHPLBJKB_00810 0.31 +0.3
833,061 - OHPLBJKB_00810 0.31 -0.6
833,201 + OHPLBJKB_00810 0.44 +1.3

Or see this region's nucleotide sequence