Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_00787

Experiment: Control_HSF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_00785 and OHPLBJKB_00786 overlap by 4 nucleotidesOHPLBJKB_00786 and OHPLBJKB_00787 are separated by 21 nucleotidesOHPLBJKB_00787 and OHPLBJKB_00788 overlap by 4 nucleotidesOHPLBJKB_00788 and OHPLBJKB_00789 are separated by 284 nucleotides OHPLBJKB_00785: OHPLBJKB_00785 - Mannitol-1-phosphate 5-dehydrogenase, at 805,934 to 807,211 _00785 OHPLBJKB_00786: OHPLBJKB_00786 - Fructose-1,6-bisphosphatase 2 class 2, at 807,208 to 808,173 _00786 OHPLBJKB_00787: OHPLBJKB_00787 - Fumarase E, at 808,195 to 808,704 _00787 OHPLBJKB_00788: OHPLBJKB_00788 - Pantothenate kinase, at 808,701 to 809,414 _00788 OHPLBJKB_00789: OHPLBJKB_00789 - D-erythrose-4-phosphate dehydrogenase, at 809,699 to 810,718 _00789 Position (kb) 808 809Strain fitness (log2 ratio) -2 -1 0 1 2at 807.230 kb on + strandat 807.230 kb on + strandat 807.336 kb on - strand, within OHPLBJKB_00786at 807.534 kb on + strand, within OHPLBJKB_00786at 807.535 kb on - strand, within OHPLBJKB_00786at 807.542 kb on + strand, within OHPLBJKB_00786at 807.543 kb on - strand, within OHPLBJKB_00786at 807.543 kb on - strand, within OHPLBJKB_00786at 807.543 kb on - strand, within OHPLBJKB_00786at 807.543 kb on - strand, within OHPLBJKB_00786at 807.543 kb on - strand, within OHPLBJKB_00786at 807.555 kb on + strand, within OHPLBJKB_00786at 807.555 kb on + strand, within OHPLBJKB_00786at 807.559 kb on + strand, within OHPLBJKB_00786at 807.559 kb on + strand, within OHPLBJKB_00786at 807.559 kb on + strand, within OHPLBJKB_00786at 807.559 kb on + strand, within OHPLBJKB_00786at 807.559 kb on + strand, within OHPLBJKB_00786at 807.559 kb on + strand, within OHPLBJKB_00786at 807.559 kb on + strand, within OHPLBJKB_00786at 807.559 kb on + strand, within OHPLBJKB_00786at 807.559 kb on + strand, within OHPLBJKB_00786at 807.560 kb on - strand, within OHPLBJKB_00786at 807.560 kb on - strand, within OHPLBJKB_00786at 807.560 kb on - strand, within OHPLBJKB_00786at 807.560 kb on - strand, within OHPLBJKB_00786at 807.560 kb on - strand, within OHPLBJKB_00786at 807.560 kb on - strand, within OHPLBJKB_00786at 807.560 kb on - strand, within OHPLBJKB_00786at 807.560 kb on - strand, within OHPLBJKB_00786at 807.560 kb on - strand, within OHPLBJKB_00786at 807.560 kb on - strand, within OHPLBJKB_00786at 807.560 kb on - strand, within OHPLBJKB_00786at 807.560 kb on - strand, within OHPLBJKB_00786at 807.685 kb on - strand, within OHPLBJKB_00786at 807.809 kb on - strand, within OHPLBJKB_00786at 807.820 kb on + strand, within OHPLBJKB_00786at 807.820 kb on + strand, within OHPLBJKB_00786at 807.820 kb on + strand, within OHPLBJKB_00786at 807.820 kb on + strand, within OHPLBJKB_00786at 807.820 kb on + strand, within OHPLBJKB_00786at 807.821 kb on - strand, within OHPLBJKB_00786at 807.821 kb on - strand, within OHPLBJKB_00786at 807.821 kb on - strand, within OHPLBJKB_00786at 807.821 kb on - strand, within OHPLBJKB_00786at 807.821 kb on - strand, within OHPLBJKB_00786at 807.821 kb on - strand, within OHPLBJKB_00786at 807.821 kb on - strand, within OHPLBJKB_00786at 807.821 kb on - strand, within OHPLBJKB_00786at 807.885 kb on + strand, within OHPLBJKB_00786at 807.919 kb on - strand, within OHPLBJKB_00786at 808.003 kb on + strand, within OHPLBJKB_00786at 808.003 kb on + strand, within OHPLBJKB_00786at 808.003 kb on + strand, within OHPLBJKB_00786at 808.003 kb on + strand, within OHPLBJKB_00786at 808.004 kb on - strand, within OHPLBJKB_00786at 808.121 kb on + strandat 808.121 kb on + strandat 808.149 kb on + strandat 808.149 kb on + strandat 808.150 kb on - strandat 808.152 kb on + strandat 808.152 kb on + strandat 808.152 kb on + strandat 808.152 kb on + strandat 808.152 kb on + strandat 808.152 kb on + strandat 808.152 kb on + strandat 808.152 kb on + strandat 808.153 kb on - strandat 808.153 kb on - strandat 808.153 kb on - strandat 808.153 kb on - strandat 808.153 kb on - strandat 808.153 kb on - strandat 808.153 kb on - strandat 808.153 kb on - strandat 808.154 kb on + strandat 808.154 kb on + strandat 808.154 kb on + strandat 808.154 kb on + strandat 808.154 kb on + strandat 808.154 kb on + strandat 808.154 kb on + strandat 808.154 kb on + strandat 808.154 kb on + strandat 808.155 kb on - strandat 808.155 kb on - strandat 808.155 kb on - strandat 808.155 kb on - strandat 808.155 kb on - strandat 808.155 kb on - strandat 808.157 kb on + strandat 808.157 kb on + strandat 808.158 kb on - strandat 808.158 kb on - strandat 808.158 kb on - strandat 808.250 kb on + strand, within OHPLBJKB_00787at 808.251 kb on - strand, within OHPLBJKB_00787at 808.251 kb on - strand, within OHPLBJKB_00787at 808.260 kb on + strand, within OHPLBJKB_00787at 808.261 kb on - strand, within OHPLBJKB_00787at 808.261 kb on - strand, within OHPLBJKB_00787at 808.348 kb on + strand, within OHPLBJKB_00787at 808.348 kb on + strand, within OHPLBJKB_00787at 808.348 kb on + strand, within OHPLBJKB_00787at 808.349 kb on - strand, within OHPLBJKB_00787at 808.418 kb on - strand, within OHPLBJKB_00787at 808.437 kb on + strand, within OHPLBJKB_00787at 808.437 kb on + strand, within OHPLBJKB_00787at 808.447 kb on + strand, within OHPLBJKB_00787at 808.447 kb on + strand, within OHPLBJKB_00787at 808.580 kb on - strand, within OHPLBJKB_00787at 808.694 kb on + strandat 808.714 kb on + strandat 808.715 kb on - strandat 808.735 kb on + strandat 808.771 kb on + strandat 808.772 kb on - strandat 808.775 kb on + strand, within OHPLBJKB_00788at 808.775 kb on + strand, within OHPLBJKB_00788at 808.775 kb on + strand, within OHPLBJKB_00788at 808.775 kb on + strand, within OHPLBJKB_00788at 808.776 kb on - strand, within OHPLBJKB_00788at 808.776 kb on - strand, within OHPLBJKB_00788at 808.804 kb on + strand, within OHPLBJKB_00788at 808.805 kb on - strand, within OHPLBJKB_00788at 808.814 kb on - strand, within OHPLBJKB_00788at 808.830 kb on - strand, within OHPLBJKB_00788at 808.959 kb on + strand, within OHPLBJKB_00788at 808.959 kb on + strand, within OHPLBJKB_00788at 808.960 kb on - strand, within OHPLBJKB_00788at 808.960 kb on - strand, within OHPLBJKB_00788at 808.960 kb on - strand, within OHPLBJKB_00788at 808.960 kb on - strand, within OHPLBJKB_00788at 808.964 kb on + strand, within OHPLBJKB_00788at 808.964 kb on + strand, within OHPLBJKB_00788at 808.965 kb on - strand, within OHPLBJKB_00788at 808.965 kb on - strand, within OHPLBJKB_00788at 808.965 kb on - strand, within OHPLBJKB_00788at 809.069 kb on + strand, within OHPLBJKB_00788at 809.069 kb on + strand, within OHPLBJKB_00788at 809.069 kb on + strand, within OHPLBJKB_00788at 809.070 kb on - strand, within OHPLBJKB_00788at 809.070 kb on - strand, within OHPLBJKB_00788at 809.082 kb on + strand, within OHPLBJKB_00788at 809.083 kb on - strand, within OHPLBJKB_00788at 809.219 kb on + strand, within OHPLBJKB_00788at 809.258 kb on + strand, within OHPLBJKB_00788at 809.264 kb on + strand, within OHPLBJKB_00788at 809.265 kb on - strand, within OHPLBJKB_00788at 809.282 kb on - strand, within OHPLBJKB_00788at 809.294 kb on - strand, within OHPLBJKB_00788at 809.294 kb on - strand, within OHPLBJKB_00788at 809.307 kb on + strand, within OHPLBJKB_00788at 809.307 kb on + strand, within OHPLBJKB_00788at 809.307 kb on + strand, within OHPLBJKB_00788at 809.308 kb on - strand, within OHPLBJKB_00788at 809.308 kb on - strand, within OHPLBJKB_00788at 809.308 kb on - strand, within OHPLBJKB_00788at 809.351 kb on + strandat 809.372 kb on - strandat 809.372 kb on - strandat 809.374 kb on + strandat 809.375 kb on - strandat 809.375 kb on - strandat 809.397 kb on + strandat 809.440 kb on + strandat 809.444 kb on - strandat 809.444 kb on - strandat 809.505 kb on + strandat 809.505 kb on + strandat 809.505 kb on + strandat 809.505 kb on + strandat 809.505 kb on + strandat 809.505 kb on + strandat 809.505 kb on + strandat 809.506 kb on - strandat 809.539 kb on + strandat 809.556 kb on - strandat 809.597 kb on + strandat 809.597 kb on + strandat 809.625 kb on + strandat 809.626 kb on - strandat 809.626 kb on - strandat 809.654 kb on - strandat 809.654 kb on - strandat 809.698 kb on + strandat 809.698 kb on + strandat 809.698 kb on + strandat 809.698 kb on + strandat 809.698 kb on + strandat 809.699 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_HSF
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807,230 + -0.6
807,230 + +0.3
807,336 - OHPLBJKB_00786 0.13 -0.7
807,534 + OHPLBJKB_00786 0.34 +0.5
807,535 - OHPLBJKB_00786 0.34 -0.3
807,542 + OHPLBJKB_00786 0.35 -0.2
807,543 - OHPLBJKB_00786 0.35 +0.0
807,543 - OHPLBJKB_00786 0.35 -1.5
807,543 - OHPLBJKB_00786 0.35 -1.3
807,543 - OHPLBJKB_00786 0.35 +0.8
807,543 - OHPLBJKB_00786 0.35 -0.3
807,555 + OHPLBJKB_00786 0.36 +0.8
807,555 + OHPLBJKB_00786 0.36 +0.6
807,559 + OHPLBJKB_00786 0.36 +0.1
807,559 + OHPLBJKB_00786 0.36 -0.1
807,559 + OHPLBJKB_00786 0.36 +0.9
807,559 + OHPLBJKB_00786 0.36 +0.1
807,559 + OHPLBJKB_00786 0.36 -0.6
807,559 + OHPLBJKB_00786 0.36 +0.5
807,559 + OHPLBJKB_00786 0.36 -1.5
807,559 + OHPLBJKB_00786 0.36 -0.4
807,559 + OHPLBJKB_00786 0.36 -0.4
807,560 - OHPLBJKB_00786 0.36 -0.6
807,560 - OHPLBJKB_00786 0.36 +0.7
807,560 - OHPLBJKB_00786 0.36 -0.7
807,560 - OHPLBJKB_00786 0.36 -0.0
807,560 - OHPLBJKB_00786 0.36 +0.7
807,560 - OHPLBJKB_00786 0.36 -2.6
807,560 - OHPLBJKB_00786 0.36 -0.2
807,560 - OHPLBJKB_00786 0.36 +0.4
807,560 - OHPLBJKB_00786 0.36 -2.4
807,560 - OHPLBJKB_00786 0.36 -0.8
807,560 - OHPLBJKB_00786 0.36 -2.5
807,560 - OHPLBJKB_00786 0.36 -1.1
807,685 - OHPLBJKB_00786 0.49 +0.4
807,809 - OHPLBJKB_00786 0.62 -1.3
807,820 + OHPLBJKB_00786 0.63 -0.2
807,820 + OHPLBJKB_00786 0.63 +1.0
807,820 + OHPLBJKB_00786 0.63 -0.3
807,820 + OHPLBJKB_00786 0.63 +0.0
807,820 + OHPLBJKB_00786 0.63 -0.1
807,821 - OHPLBJKB_00786 0.63 -0.7
807,821 - OHPLBJKB_00786 0.63 +0.6
807,821 - OHPLBJKB_00786 0.63 +1.0
807,821 - OHPLBJKB_00786 0.63 -0.9
807,821 - OHPLBJKB_00786 0.63 +0.2
807,821 - OHPLBJKB_00786 0.63 +0.2
807,821 - OHPLBJKB_00786 0.63 +0.4
807,821 - OHPLBJKB_00786 0.63 +0.6
807,885 + OHPLBJKB_00786 0.70 +0.3
807,919 - OHPLBJKB_00786 0.74 +0.0
808,003 + OHPLBJKB_00786 0.82 +0.4
808,003 + OHPLBJKB_00786 0.82 +1.0
808,003 + OHPLBJKB_00786 0.82 +0.8
808,003 + OHPLBJKB_00786 0.82 -0.9
808,004 - OHPLBJKB_00786 0.82 +0.5
808,121 + -0.3
808,121 + -0.8
808,149 + -0.3
808,149 + -0.0
808,150 - -0.3
808,152 + -0.0
808,152 + +0.6
808,152 + +1.8
808,152 + +0.5
808,152 + -0.8
808,152 + -0.1
808,152 + -0.3
808,152 + -0.2
808,153 - +1.4
808,153 - -0.7
808,153 - -0.7
808,153 - -0.6
808,153 - -0.8
808,153 - +0.2
808,153 - -0.6
808,153 - +1.0
808,154 + -0.3
808,154 + +0.6
808,154 + +0.3
808,154 + -0.1
808,154 + -0.1
808,154 + +0.1
808,154 + -0.7
808,154 + -0.4
808,154 + -1.0
808,155 - -0.3
808,155 - +0.2
808,155 - +0.8
808,155 - +0.2
808,155 - +1.1
808,155 - +0.3
808,157 + -0.4
808,157 + -0.8
808,158 - -0.6
808,158 - +0.0
808,158 - -0.8
808,250 + OHPLBJKB_00787 0.11 +0.3
808,251 - OHPLBJKB_00787 0.11 -0.1
808,251 - OHPLBJKB_00787 0.11 -0.2
808,260 + OHPLBJKB_00787 0.13 +0.4
808,261 - OHPLBJKB_00787 0.13 +0.6
808,261 - OHPLBJKB_00787 0.13 +0.9
808,348 + OHPLBJKB_00787 0.30 -0.5
808,348 + OHPLBJKB_00787 0.30 +2.3
808,348 + OHPLBJKB_00787 0.30 -1.1
808,349 - OHPLBJKB_00787 0.30 +0.2
808,418 - OHPLBJKB_00787 0.44 +1.3
808,437 + OHPLBJKB_00787 0.47 +0.3
808,437 + OHPLBJKB_00787 0.47 +0.6
808,447 + OHPLBJKB_00787 0.49 -0.1
808,447 + OHPLBJKB_00787 0.49 -1.6
808,580 - OHPLBJKB_00787 0.75 -0.1
808,694 + +0.2
808,714 + +0.7
808,715 - +0.3
808,735 + +1.3
808,771 + -0.6
808,772 - +0.6
808,775 + OHPLBJKB_00788 0.10 -1.1
808,775 + OHPLBJKB_00788 0.10 -0.1
808,775 + OHPLBJKB_00788 0.10 -0.6
808,775 + OHPLBJKB_00788 0.10 +0.6
808,776 - OHPLBJKB_00788 0.11 -0.3
808,776 - OHPLBJKB_00788 0.11 -0.4
808,804 + OHPLBJKB_00788 0.14 +0.5
808,805 - OHPLBJKB_00788 0.15 +0.6
808,814 - OHPLBJKB_00788 0.16 -0.4
808,830 - OHPLBJKB_00788 0.18 -0.4
808,959 + OHPLBJKB_00788 0.36 -0.1
808,959 + OHPLBJKB_00788 0.36 +0.3
808,960 - OHPLBJKB_00788 0.36 -0.3
808,960 - OHPLBJKB_00788 0.36 -0.5
808,960 - OHPLBJKB_00788 0.36 +0.5
808,960 - OHPLBJKB_00788 0.36 +0.0
808,964 + OHPLBJKB_00788 0.37 +0.5
808,964 + OHPLBJKB_00788 0.37 +0.4
808,965 - OHPLBJKB_00788 0.37 +1.0
808,965 - OHPLBJKB_00788 0.37 -0.4
808,965 - OHPLBJKB_00788 0.37 -0.8
809,069 + OHPLBJKB_00788 0.52 -0.3
809,069 + OHPLBJKB_00788 0.52 +2.2
809,069 + OHPLBJKB_00788 0.52 -0.7
809,070 - OHPLBJKB_00788 0.52 -0.7
809,070 - OHPLBJKB_00788 0.52 -0.3
809,082 + OHPLBJKB_00788 0.53 +0.4
809,083 - OHPLBJKB_00788 0.54 -0.3
809,219 + OHPLBJKB_00788 0.73 +1.3
809,258 + OHPLBJKB_00788 0.78 -1.3
809,264 + OHPLBJKB_00788 0.79 +0.0
809,265 - OHPLBJKB_00788 0.79 -1.5
809,282 - OHPLBJKB_00788 0.81 -0.0
809,294 - OHPLBJKB_00788 0.83 +0.3
809,294 - OHPLBJKB_00788 0.83 -0.2
809,307 + OHPLBJKB_00788 0.85 -0.8
809,307 + OHPLBJKB_00788 0.85 -0.1
809,307 + OHPLBJKB_00788 0.85 +0.4
809,308 - OHPLBJKB_00788 0.85 -0.5
809,308 - OHPLBJKB_00788 0.85 -0.2
809,308 - OHPLBJKB_00788 0.85 -0.9
809,351 + -0.6
809,372 - -0.5
809,372 - -0.1
809,374 + -0.2
809,375 - +0.3
809,375 - +0.5
809,397 + +0.6
809,440 + +0.1
809,444 - -0.8
809,444 - +0.9
809,505 + +0.6
809,505 + -0.6
809,505 + -0.2
809,505 + -0.5
809,505 + -0.4
809,505 + -0.5
809,505 + -0.0
809,506 - +0.4
809,539 + -0.1
809,556 - +0.9
809,597 + +0.8
809,597 + -0.6
809,625 + -0.4
809,626 - -0.7
809,626 - -0.6
809,654 - +0.3
809,654 - -2.0
809,698 + +0.7
809,698 + +0.3
809,698 + -0.3
809,698 + -0.2
809,698 + -1.1
809,699 - +0.7

Or see this region's nucleotide sequence