Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_00631

Experiment: Control_HSF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_00630 and OHPLBJKB_00631 are separated by 153 nucleotidesOHPLBJKB_00631 and OHPLBJKB_00632 are separated by 287 nucleotides OHPLBJKB_00630: OHPLBJKB_00630 - Aerotaxis receptor, at 648,381 to 649,901 _00630 OHPLBJKB_00631: OHPLBJKB_00631 - Transcriptional regulator YqjI, at 650,055 to 650,678 _00631 OHPLBJKB_00632: OHPLBJKB_00632 - NADPH-dependent ferric-chelate reductase, at 650,966 to 651,730 _00632 Position (kb) 650 651Strain fitness (log2 ratio) -3 -2 -1 0 1at 649.061 kb on + strand, within OHPLBJKB_00630at 649.061 kb on + strand, within OHPLBJKB_00630at 649.061 kb on + strand, within OHPLBJKB_00630at 649.061 kb on + strand, within OHPLBJKB_00630at 649.061 kb on + strand, within OHPLBJKB_00630at 649.061 kb on + strand, within OHPLBJKB_00630at 649.062 kb on - strand, within OHPLBJKB_00630at 649.062 kb on - strand, within OHPLBJKB_00630at 649.062 kb on - strand, within OHPLBJKB_00630at 649.062 kb on - strand, within OHPLBJKB_00630at 649.062 kb on - strand, within OHPLBJKB_00630at 649.062 kb on - strand, within OHPLBJKB_00630at 649.062 kb on - strand, within OHPLBJKB_00630at 649.062 kb on - strand, within OHPLBJKB_00630at 649.062 kb on - strand, within OHPLBJKB_00630at 649.064 kb on + strand, within OHPLBJKB_00630at 649.065 kb on - strand, within OHPLBJKB_00630at 649.108 kb on + strand, within OHPLBJKB_00630at 649.108 kb on + strand, within OHPLBJKB_00630at 649.109 kb on - strand, within OHPLBJKB_00630at 649.109 kb on - strand, within OHPLBJKB_00630at 649.109 kb on - strand, within OHPLBJKB_00630at 649.109 kb on - strand, within OHPLBJKB_00630at 649.151 kb on + strand, within OHPLBJKB_00630at 649.151 kb on + strand, within OHPLBJKB_00630at 649.151 kb on + strand, within OHPLBJKB_00630at 649.152 kb on - strand, within OHPLBJKB_00630at 649.233 kb on - strand, within OHPLBJKB_00630at 649.352 kb on + strand, within OHPLBJKB_00630at 649.352 kb on + strand, within OHPLBJKB_00630at 649.442 kb on + strand, within OHPLBJKB_00630at 649.442 kb on + strand, within OHPLBJKB_00630at 649.443 kb on - strand, within OHPLBJKB_00630at 649.568 kb on - strand, within OHPLBJKB_00630at 649.682 kb on + strand, within OHPLBJKB_00630at 649.683 kb on - strand, within OHPLBJKB_00630at 649.683 kb on - strand, within OHPLBJKB_00630at 649.683 kb on - strand, within OHPLBJKB_00630at 649.959 kb on + strandat 649.960 kb on - strandat 650.069 kb on + strandat 650.069 kb on + strandat 650.070 kb on - strandat 650.070 kb on - strandat 650.073 kb on - strandat 650.113 kb on - strandat 650.315 kb on + strand, within OHPLBJKB_00631at 650.315 kb on + strand, within OHPLBJKB_00631at 650.402 kb on - strand, within OHPLBJKB_00631at 650.402 kb on - strand, within OHPLBJKB_00631at 650.402 kb on - strand, within OHPLBJKB_00631at 650.402 kb on - strand, within OHPLBJKB_00631at 650.472 kb on - strand, within OHPLBJKB_00631at 650.651 kb on + strandat 650.651 kb on + strandat 650.652 kb on - strandat 650.652 kb on - strandat 650.731 kb on - strandat 650.863 kb on + strandat 650.863 kb on + strandat 650.863 kb on + strandat 650.865 kb on + strandat 650.866 kb on - strandat 650.937 kb on - strandat 650.937 kb on - strandat 650.971 kb on + strandat 651.034 kb on - strandat 651.100 kb on + strand, within OHPLBJKB_00632at 651.100 kb on + strand, within OHPLBJKB_00632at 651.227 kb on + strand, within OHPLBJKB_00632at 651.228 kb on - strand, within OHPLBJKB_00632at 651.228 kb on - strand, within OHPLBJKB_00632at 651.229 kb on + strand, within OHPLBJKB_00632at 651.230 kb on - strand, within OHPLBJKB_00632at 651.230 kb on - strand, within OHPLBJKB_00632at 651.240 kb on - strand, within OHPLBJKB_00632at 651.249 kb on + strand, within OHPLBJKB_00632at 651.278 kb on - strand, within OHPLBJKB_00632at 651.302 kb on - strand, within OHPLBJKB_00632at 651.395 kb on + strand, within OHPLBJKB_00632at 651.395 kb on + strand, within OHPLBJKB_00632at 651.396 kb on - strand, within OHPLBJKB_00632at 651.396 kb on - strand, within OHPLBJKB_00632at 651.396 kb on - strand, within OHPLBJKB_00632at 651.475 kb on + strand, within OHPLBJKB_00632at 651.475 kb on + strand, within OHPLBJKB_00632at 651.515 kb on + strand, within OHPLBJKB_00632at 651.573 kb on + strand, within OHPLBJKB_00632at 651.574 kb on - strand, within OHPLBJKB_00632at 651.614 kb on + strand, within OHPLBJKB_00632at 651.614 kb on + strand, within OHPLBJKB_00632at 651.614 kb on + strand, within OHPLBJKB_00632at 651.615 kb on - strand, within OHPLBJKB_00632at 651.615 kb on - strand, within OHPLBJKB_00632at 651.615 kb on - strand, within OHPLBJKB_00632

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_HSF
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649,061 + OHPLBJKB_00630 0.45 +0.0
649,061 + OHPLBJKB_00630 0.45 +0.3
649,061 + OHPLBJKB_00630 0.45 -0.6
649,061 + OHPLBJKB_00630 0.45 +0.3
649,061 + OHPLBJKB_00630 0.45 +0.1
649,061 + OHPLBJKB_00630 0.45 +0.6
649,062 - OHPLBJKB_00630 0.45 +0.1
649,062 - OHPLBJKB_00630 0.45 -0.5
649,062 - OHPLBJKB_00630 0.45 +0.5
649,062 - OHPLBJKB_00630 0.45 +0.6
649,062 - OHPLBJKB_00630 0.45 +0.3
649,062 - OHPLBJKB_00630 0.45 +0.1
649,062 - OHPLBJKB_00630 0.45 -0.7
649,062 - OHPLBJKB_00630 0.45 +0.6
649,062 - OHPLBJKB_00630 0.45 +0.1
649,064 + OHPLBJKB_00630 0.45 -0.8
649,065 - OHPLBJKB_00630 0.45 +1.0
649,108 + OHPLBJKB_00630 0.48 +0.3
649,108 + OHPLBJKB_00630 0.48 +0.1
649,109 - OHPLBJKB_00630 0.48 +0.4
649,109 - OHPLBJKB_00630 0.48 +0.4
649,109 - OHPLBJKB_00630 0.48 -0.5
649,109 - OHPLBJKB_00630 0.48 -0.8
649,151 + OHPLBJKB_00630 0.51 +0.2
649,151 + OHPLBJKB_00630 0.51 +1.1
649,151 + OHPLBJKB_00630 0.51 -0.1
649,152 - OHPLBJKB_00630 0.51 -0.9
649,233 - OHPLBJKB_00630 0.56 -1.1
649,352 + OHPLBJKB_00630 0.64 -0.2
649,352 + OHPLBJKB_00630 0.64 -0.7
649,442 + OHPLBJKB_00630 0.70 -0.7
649,442 + OHPLBJKB_00630 0.70 -0.5
649,443 - OHPLBJKB_00630 0.70 +0.8
649,568 - OHPLBJKB_00630 0.78 -1.0
649,682 + OHPLBJKB_00630 0.86 -2.8
649,683 - OHPLBJKB_00630 0.86 +0.7
649,683 - OHPLBJKB_00630 0.86 -0.4
649,683 - OHPLBJKB_00630 0.86 +0.3
649,959 + +1.0
649,960 - +1.0
650,069 + -0.8
650,069 + -0.8
650,070 - -0.1
650,070 - -1.0
650,073 - -0.4
650,113 - -0.8
650,315 + OHPLBJKB_00631 0.42 +1.3
650,315 + OHPLBJKB_00631 0.42 -1.0
650,402 - OHPLBJKB_00631 0.56 -1.6
650,402 - OHPLBJKB_00631 0.56 -0.6
650,402 - OHPLBJKB_00631 0.56 -2.1
650,402 - OHPLBJKB_00631 0.56 +0.4
650,472 - OHPLBJKB_00631 0.67 +0.0
650,651 + -0.4
650,651 + -0.3
650,652 - +0.0
650,652 - -1.2
650,731 - -0.2
650,863 + -0.4
650,863 + +0.6
650,863 + -0.1
650,865 + -0.5
650,866 - -0.1
650,937 - +0.2
650,937 - +0.3
650,971 + +0.7
651,034 - -1.2
651,100 + OHPLBJKB_00632 0.18 -0.1
651,100 + OHPLBJKB_00632 0.18 -0.7
651,227 + OHPLBJKB_00632 0.34 +0.5
651,228 - OHPLBJKB_00632 0.34 -0.2
651,228 - OHPLBJKB_00632 0.34 +0.8
651,229 + OHPLBJKB_00632 0.34 -0.2
651,230 - OHPLBJKB_00632 0.35 +0.0
651,230 - OHPLBJKB_00632 0.35 +0.1
651,240 - OHPLBJKB_00632 0.36 +0.1
651,249 + OHPLBJKB_00632 0.37 +1.0
651,278 - OHPLBJKB_00632 0.41 +0.3
651,302 - OHPLBJKB_00632 0.44 +0.0
651,395 + OHPLBJKB_00632 0.56 -0.1
651,395 + OHPLBJKB_00632 0.56 -0.2
651,396 - OHPLBJKB_00632 0.56 -0.1
651,396 - OHPLBJKB_00632 0.56 -0.6
651,396 - OHPLBJKB_00632 0.56 +0.1
651,475 + OHPLBJKB_00632 0.67 +0.1
651,475 + OHPLBJKB_00632 0.67 +0.4
651,515 + OHPLBJKB_00632 0.72 -0.9
651,573 + OHPLBJKB_00632 0.79 +0.2
651,574 - OHPLBJKB_00632 0.79 +0.9
651,614 + OHPLBJKB_00632 0.85 +0.2
651,614 + OHPLBJKB_00632 0.85 -0.1
651,614 + OHPLBJKB_00632 0.85 +0.1
651,615 - OHPLBJKB_00632 0.85 -1.0
651,615 - OHPLBJKB_00632 0.85 -2.0
651,615 - OHPLBJKB_00632 0.85 +0.3

Or see this region's nucleotide sequence