Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00465 and OHPLBJKB_00466 are separated by 55 nucleotides OHPLBJKB_00466 and OHPLBJKB_00467 are separated by 364 nucleotides OHPLBJKB_00467 and OHPLBJKB_00468 are separated by 434 nucleotides
OHPLBJKB_00465: OHPLBJKB_00465 - putative protein YhcO, at 481,184 to 481,456
_00465
OHPLBJKB_00466: OHPLBJKB_00466 - Multiple stress resistance protein BhsA, at 481,512 to 481,775
_00466
OHPLBJKB_00467: OHPLBJKB_00467 - Arginine repressor, at 482,140 to 482,610
_00467
OHPLBJKB_00468: OHPLBJKB_00468 - Malate dehydrogenase, at 483,045 to 483,983
_00468
Position (kb) 482
483 Strain fitness (log2 ratio) -2
-1
0
1
2 at 481.189 kb on + strand at 481.189 kb on + strand at 481.189 kb on + strand at 481.189 kb on + strand at 481.194 kb on - strand at 481.196 kb on - strand at 481.279 kb on - strand, within OHPLBJKB_00465 at 481.392 kb on + strand, within OHPLBJKB_00465 at 481.393 kb on - strand, within OHPLBJKB_00465 at 481.441 kb on + strand at 481.441 kb on + strand at 481.442 kb on - strand at 481.488 kb on - strand at 481.513 kb on + strand at 481.514 kb on - strand at 481.519 kb on + strand at 481.623 kb on - strand, within OHPLBJKB_00466 at 481.740 kb on + strand, within OHPLBJKB_00466 at 481.746 kb on + strand, within OHPLBJKB_00466 at 481.746 kb on + strand, within OHPLBJKB_00466 at 481.746 kb on + strand, within OHPLBJKB_00466 at 481.746 kb on + strand, within OHPLBJKB_00466 at 481.792 kb on + strand at 481.793 kb on - strand at 481.801 kb on - strand at 481.827 kb on - strand at 481.867 kb on + strand at 482.142 kb on - strand at 482.214 kb on + strand, within OHPLBJKB_00467 at 482.215 kb on - strand, within OHPLBJKB_00467 at 482.250 kb on + strand, within OHPLBJKB_00467 at 482.250 kb on + strand, within OHPLBJKB_00467 at 482.313 kb on + strand, within OHPLBJKB_00467 at 482.386 kb on + strand, within OHPLBJKB_00467 at 482.439 kb on + strand, within OHPLBJKB_00467 at 482.439 kb on + strand, within OHPLBJKB_00467 at 482.440 kb on - strand, within OHPLBJKB_00467 at 482.443 kb on + strand, within OHPLBJKB_00467 at 482.443 kb on + strand, within OHPLBJKB_00467 at 482.444 kb on - strand, within OHPLBJKB_00467 at 482.444 kb on - strand, within OHPLBJKB_00467 at 482.479 kb on - strand, within OHPLBJKB_00467 at 482.479 kb on - strand, within OHPLBJKB_00467 at 482.487 kb on + strand, within OHPLBJKB_00467 at 482.488 kb on - strand, within OHPLBJKB_00467 at 482.541 kb on + strand, within OHPLBJKB_00467 at 482.556 kb on + strand, within OHPLBJKB_00467 at 482.556 kb on + strand, within OHPLBJKB_00467 at 482.557 kb on - strand, within OHPLBJKB_00467 at 482.557 kb on - strand, within OHPLBJKB_00467 at 482.560 kb on + strand, within OHPLBJKB_00467 at 482.569 kb on - strand at 482.577 kb on + strand at 482.577 kb on + strand at 482.578 kb on - strand at 482.581 kb on + strand at 482.582 kb on - strand at 482.582 kb on - strand at 482.610 kb on + strand at 482.610 kb on + strand at 482.610 kb on + strand at 482.610 kb on + strand at 482.610 kb on + strand at 482.610 kb on + strand at 482.610 kb on + strand at 482.611 kb on - strand at 482.634 kb on + strand at 482.634 kb on + strand at 482.635 kb on - strand at 482.635 kb on - strand at 482.635 kb on - strand at 482.635 kb on - strand at 482.642 kb on + strand at 482.643 kb on - strand at 482.651 kb on + strand at 482.698 kb on + strand at 482.829 kb on + strand at 482.829 kb on + strand at 482.829 kb on + strand at 482.829 kb on + strand at 482.829 kb on + strand at 482.829 kb on + strand at 482.830 kb on - strand at 482.830 kb on - strand at 482.831 kb on + strand at 482.831 kb on + strand at 482.831 kb on + strand at 482.831 kb on + strand at 482.831 kb on + strand at 482.831 kb on + strand at 482.832 kb on - strand at 482.832 kb on - strand at 482.832 kb on - strand at 482.867 kb on + strand at 482.879 kb on - strand at 482.882 kb on + strand at 482.887 kb on - strand at 482.891 kb on + strand at 482.891 kb on + strand at 482.891 kb on + strand at 482.892 kb on - strand at 482.892 kb on - strand at 482.892 kb on - strand at 482.892 kb on - strand at 482.892 kb on - strand at 482.892 kb on - strand at 482.912 kb on + strand at 482.912 kb on + strand at 482.912 kb on + strand at 482.913 kb on - strand at 482.920 kb on + strand at 482.941 kb on + strand at 482.941 kb on + strand at 482.967 kb on + strand at 483.011 kb on + strand at 483.011 kb on + strand at 483.011 kb on + strand at 483.011 kb on + strand at 483.011 kb on + strand at 483.011 kb on + strand at 483.011 kb on + strand at 483.012 kb on - strand at 483.012 kb on - strand at 483.012 kb on - strand at 483.012 kb on - strand at 483.016 kb on + strand at 483.016 kb on + strand at 483.017 kb on - strand at 483.027 kb on + strand at 483.027 kb on + strand at 483.028 kb on - strand at 483.028 kb on - strand at 483.028 kb on - strand at 483.029 kb on + strand at 483.029 kb on + strand at 483.030 kb on - strand at 483.041 kb on + strand at 483.042 kb on - strand at 483.098 kb on - strand at 483.103 kb on + strand at 483.141 kb on + strand, within OHPLBJKB_00468 at 483.141 kb on + strand, within OHPLBJKB_00468 at 483.188 kb on + strand, within OHPLBJKB_00468 at 483.195 kb on - strand, within OHPLBJKB_00468 at 483.266 kb on + strand, within OHPLBJKB_00468 at 483.267 kb on - strand, within OHPLBJKB_00468 at 483.267 kb on - strand, within OHPLBJKB_00468 at 483.267 kb on - strand, within OHPLBJKB_00468 at 483.350 kb on - strand, within OHPLBJKB_00468 at 483.389 kb on + strand, within OHPLBJKB_00468
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 481,189 + +0.4 481,189 + -0.3 481,189 + +0.4 481,189 + -0.8 481,194 - +1.4 481,196 - -0.4 481,279 - OHPLBJKB_00465 0.35 -0.0 481,392 + OHPLBJKB_00465 0.76 -0.7 481,393 - OHPLBJKB_00465 0.77 -0.3 481,441 + -0.6 481,441 + -1.6 481,442 - +0.3 481,488 - -0.4 481,513 + -0.3 481,514 - -0.7 481,519 + -2.2 481,623 - OHPLBJKB_00466 0.42 +0.3 481,740 + OHPLBJKB_00466 0.86 +0.0 481,746 + OHPLBJKB_00466 0.89 -0.4 481,746 + OHPLBJKB_00466 0.89 +1.1 481,746 + OHPLBJKB_00466 0.89 -0.2 481,746 + OHPLBJKB_00466 0.89 +0.6 481,792 + +1.9 481,793 - +0.7 481,801 - +0.1 481,827 - -1.0 481,867 + +0.4 482,142 - +0.1 482,214 + OHPLBJKB_00467 0.16 -0.5 482,215 - OHPLBJKB_00467 0.16 -1.2 482,250 + OHPLBJKB_00467 0.23 -0.6 482,250 + OHPLBJKB_00467 0.23 +0.7 482,313 + OHPLBJKB_00467 0.37 -0.7 482,386 + OHPLBJKB_00467 0.52 -2.0 482,439 + OHPLBJKB_00467 0.63 +0.2 482,439 + OHPLBJKB_00467 0.63 +0.4 482,440 - OHPLBJKB_00467 0.64 -1.3 482,443 + OHPLBJKB_00467 0.64 -0.2 482,443 + OHPLBJKB_00467 0.64 -0.2 482,444 - OHPLBJKB_00467 0.65 -0.2 482,444 - OHPLBJKB_00467 0.65 -0.2 482,479 - OHPLBJKB_00467 0.72 -1.2 482,479 - OHPLBJKB_00467 0.72 -2.1 482,487 + OHPLBJKB_00467 0.74 -0.1 482,488 - OHPLBJKB_00467 0.74 -0.1 482,541 + OHPLBJKB_00467 0.85 -1.6 482,556 + OHPLBJKB_00467 0.88 -0.5 482,556 + OHPLBJKB_00467 0.88 -1.8 482,557 - OHPLBJKB_00467 0.89 +0.1 482,557 - OHPLBJKB_00467 0.89 +0.2 482,560 + OHPLBJKB_00467 0.89 -0.8 482,569 - -0.5 482,577 + -0.0 482,577 + -0.9 482,578 - -0.0 482,581 + -1.0 482,582 - -0.9 482,582 - -0.5 482,610 + -0.6 482,610 + -0.6 482,610 + -0.3 482,610 + -0.7 482,610 + +1.6 482,610 + -1.6 482,610 + +0.1 482,611 - -0.0 482,634 + -1.5 482,634 + +0.1 482,635 - -0.3 482,635 - -0.3 482,635 - -0.7 482,635 - +0.5 482,642 + -2.4 482,643 - +0.3 482,651 + -1.0 482,698 + -0.8 482,829 + -0.3 482,829 + +1.7 482,829 + +1.1 482,829 + +0.7 482,829 + +0.9 482,829 + +0.2 482,830 - +0.6 482,830 - +0.1 482,831 + +0.1 482,831 + +0.2 482,831 + -0.6 482,831 + +0.2 482,831 + +0.9 482,831 + -0.7 482,832 - +1.3 482,832 - -1.9 482,832 - -0.2 482,867 + -0.2 482,879 - +0.5 482,882 + +0.0 482,887 - +0.4 482,891 + -0.8 482,891 + +0.5 482,891 + -1.4 482,892 - -0.2 482,892 - -0.4 482,892 - -0.5 482,892 - -0.3 482,892 - +0.5 482,892 - -0.3 482,912 + +0.7 482,912 + +0.3 482,912 + -0.4 482,913 - -0.8 482,920 + -1.4 482,941 + -1.2 482,941 + +0.1 482,967 + -0.4 483,011 + +1.0 483,011 + -0.4 483,011 + +1.2 483,011 + +0.6 483,011 + -0.2 483,011 + +0.4 483,011 + -0.5 483,012 - -2.0 483,012 - -0.7 483,012 - +0.8 483,012 - +0.2 483,016 + -0.8 483,016 + +0.3 483,017 - +0.3 483,027 + -0.3 483,027 + +0.1 483,028 - -0.0 483,028 - -0.1 483,028 - -1.7 483,029 + -1.1 483,029 + +0.4 483,030 - +0.8 483,041 + -0.9 483,042 - -0.6 483,098 - +0.7 483,103 + +0.4 483,141 + OHPLBJKB_00468 0.10 +0.2 483,141 + OHPLBJKB_00468 0.10 -0.6 483,188 + OHPLBJKB_00468 0.15 -1.8 483,195 - OHPLBJKB_00468 0.16 +1.4 483,266 + OHPLBJKB_00468 0.24 +0.5 483,267 - OHPLBJKB_00468 0.24 -0.8 483,267 - OHPLBJKB_00468 0.24 -0.2 483,267 - OHPLBJKB_00468 0.24 +0.9 483,350 - OHPLBJKB_00468 0.32 +0.2 483,389 + OHPLBJKB_00468 0.37 +0.0
Or see this region's nucleotide sequence