Experiment: Control_HSF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00087 and OHPLBJKB_00088 are separated by 244 nucleotides OHPLBJKB_00088 and OHPLBJKB_00089 are separated by 141 nucleotides OHPLBJKB_00089 and OHPLBJKB_00090 are separated by 62 nucleotides OHPLBJKB_00090 and OHPLBJKB_00091 overlap by 1 nucleotides
OHPLBJKB_00087: OHPLBJKB_00087 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 91,320 to 92,864
_00087
OHPLBJKB_00088: OHPLBJKB_00088 - putative protein YibN, at 93,109 to 93,540
_00088
OHPLBJKB_00089: OHPLBJKB_00089 - Glutaredoxin 3, at 93,682 to 93,933
_00089
OHPLBJKB_00090: OHPLBJKB_00090 - Protein-export protein SecB, at 93,996 to 94,463
_00090
OHPLBJKB_00091: OHPLBJKB_00091 - Glycerol-3-phosphate dehydrogenase [NAD(P)+], at 94,463 to 95,482
_00091
Position (kb)
93
94 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 92.774 kb on + strand at 92.774 kb on + strand at 92.775 kb on - strand at 92.819 kb on - strand at 92.844 kb on - strand at 92.844 kb on - strand at 92.844 kb on - strand at 92.948 kb on - strand at 92.950 kb on - strand at 93.023 kb on + strand at 93.023 kb on + strand at 93.023 kb on + strand at 93.038 kb on - strand at 93.057 kb on + strand at 93.058 kb on - strand at 93.058 kb on - strand at 93.058 kb on - strand at 93.059 kb on + strand at 93.060 kb on - strand at 93.060 kb on - strand at 93.060 kb on - strand at 93.060 kb on - strand at 93.079 kb on + strand at 93.086 kb on + strand at 93.087 kb on - strand at 93.087 kb on - strand at 93.121 kb on - strand at 93.121 kb on - strand at 93.146 kb on + strand at 93.192 kb on + strand, within OHPLBJKB_00088 at 93.192 kb on + strand, within OHPLBJKB_00088 at 93.192 kb on + strand, within OHPLBJKB_00088 at 93.193 kb on - strand, within OHPLBJKB_00088 at 93.199 kb on - strand, within OHPLBJKB_00088 at 93.244 kb on - strand, within OHPLBJKB_00088 at 93.244 kb on - strand, within OHPLBJKB_00088 at 93.285 kb on - strand, within OHPLBJKB_00088 at 93.327 kb on + strand, within OHPLBJKB_00088 at 93.327 kb on + strand, within OHPLBJKB_00088 at 93.327 kb on + strand, within OHPLBJKB_00088 at 93.328 kb on - strand, within OHPLBJKB_00088 at 93.328 kb on - strand, within OHPLBJKB_00088 at 93.328 kb on - strand, within OHPLBJKB_00088 at 93.328 kb on - strand, within OHPLBJKB_00088 at 93.328 kb on - strand, within OHPLBJKB_00088 at 93.328 kb on - strand, within OHPLBJKB_00088 at 93.328 kb on - strand, within OHPLBJKB_00088 at 93.328 kb on - strand, within OHPLBJKB_00088 at 93.328 kb on - strand, within OHPLBJKB_00088 at 93.328 kb on - strand, within OHPLBJKB_00088 at 93.473 kb on + strand, within OHPLBJKB_00088 at 93.474 kb on - strand, within OHPLBJKB_00088 at 93.474 kb on - strand, within OHPLBJKB_00088 at 93.474 kb on - strand, within OHPLBJKB_00088 at 93.538 kb on + strand at 93.539 kb on - strand at 93.539 kb on - strand at 93.543 kb on + strand at 93.544 kb on - strand at 93.582 kb on + strand at 93.582 kb on + strand at 93.598 kb on + strand at 93.598 kb on + strand at 93.598 kb on + strand at 93.598 kb on + strand at 93.598 kb on + strand at 93.599 kb on - strand at 93.599 kb on - strand at 93.599 kb on - strand at 93.599 kb on - strand at 93.599 kb on - strand at 93.599 kb on - strand at 93.599 kb on - strand at 93.599 kb on - strand at 93.599 kb on - strand at 93.599 kb on - strand at 93.604 kb on + strand at 93.604 kb on + strand at 93.604 kb on + strand at 93.605 kb on - strand at 93.606 kb on + strand at 93.606 kb on + strand at 93.606 kb on + strand at 93.606 kb on + strand at 93.606 kb on + strand at 93.676 kb on + strand at 93.676 kb on + strand at 93.676 kb on + strand at 93.681 kb on + strand at 93.700 kb on + strand at 93.700 kb on + strand at 93.889 kb on + strand, within OHPLBJKB_00089 at 93.889 kb on + strand, within OHPLBJKB_00089 at 93.889 kb on + strand, within OHPLBJKB_00089 at 93.931 kb on + strand at 93.931 kb on + strand at 93.951 kb on + strand at 93.951 kb on + strand at 93.951 kb on + strand at 93.951 kb on + strand at 93.963 kb on + strand at 93.963 kb on + strand at 93.963 kb on + strand at 93.967 kb on + strand at 93.967 kb on + strand at 93.980 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_HSF remove 92,774 + -0.2 92,774 + -1.3 92,775 - +0.6 92,819 - -0.5 92,844 - -0.0 92,844 - +0.6 92,844 - +0.7 92,948 - +0.7 92,950 - -0.4 93,023 + +0.5 93,023 + +0.3 93,023 + -0.0 93,038 - +1.0 93,057 + -0.9 93,058 - +0.4 93,058 - -0.3 93,058 - -0.8 93,059 + +0.0 93,060 - -0.5 93,060 - -0.6 93,060 - -0.8 93,060 - -0.1 93,079 + -0.5 93,086 + -0.2 93,087 - -0.9 93,087 - -0.4 93,121 - -0.7 93,121 - +0.2 93,146 + +0.7 93,192 + OHPLBJKB_00088 0.19 -0.2 93,192 + OHPLBJKB_00088 0.19 -0.9 93,192 + OHPLBJKB_00088 0.19 -0.0 93,193 - OHPLBJKB_00088 0.19 +1.0 93,199 - OHPLBJKB_00088 0.21 +0.2 93,244 - OHPLBJKB_00088 0.31 -0.0 93,244 - OHPLBJKB_00088 0.31 -0.3 93,285 - OHPLBJKB_00088 0.41 +0.1 93,327 + OHPLBJKB_00088 0.50 -0.2 93,327 + OHPLBJKB_00088 0.50 -0.4 93,327 + OHPLBJKB_00088 0.50 +0.0 93,328 - OHPLBJKB_00088 0.51 -1.0 93,328 - OHPLBJKB_00088 0.51 -0.1 93,328 - OHPLBJKB_00088 0.51 -0.1 93,328 - OHPLBJKB_00088 0.51 -0.2 93,328 - OHPLBJKB_00088 0.51 -0.1 93,328 - OHPLBJKB_00088 0.51 +1.0 93,328 - OHPLBJKB_00088 0.51 +0.9 93,328 - OHPLBJKB_00088 0.51 -0.0 93,328 - OHPLBJKB_00088 0.51 -0.3 93,328 - OHPLBJKB_00088 0.51 +1.8 93,473 + OHPLBJKB_00088 0.84 +0.7 93,474 - OHPLBJKB_00088 0.84 -2.4 93,474 - OHPLBJKB_00088 0.84 -1.4 93,474 - OHPLBJKB_00088 0.84 -0.3 93,538 + +0.8 93,539 - -0.0 93,539 - +1.5 93,543 + -0.4 93,544 - +0.0 93,582 + -0.2 93,582 + +0.0 93,598 + -0.3 93,598 + -0.6 93,598 + +0.2 93,598 + -0.3 93,598 + +0.1 93,599 - +1.6 93,599 - +0.2 93,599 - +1.0 93,599 - -1.1 93,599 - -1.3 93,599 - +0.3 93,599 - +0.9 93,599 - +0.1 93,599 - +1.2 93,599 - -0.3 93,604 + -0.9 93,604 + +0.1 93,604 + -0.3 93,605 - +0.5 93,606 + +0.3 93,606 + +0.1 93,606 + +0.6 93,606 + +0.3 93,606 + -0.5 93,676 + -0.1 93,676 + -0.9 93,676 + -0.6 93,681 + -0.0 93,700 + -0.5 93,700 + +0.7 93,889 + OHPLBJKB_00089 0.82 -0.8 93,889 + OHPLBJKB_00089 0.82 -0.1 93,889 + OHPLBJKB_00089 0.82 -0.6 93,931 + -0.5 93,931 + +0.6 93,951 + -0.2 93,951 + +1.5 93,951 + -0.2 93,951 + -0.2 93,963 + -0.8 93,963 + -0.0 93,963 + +0.4 93,967 + -1.2 93,967 + -0.4 93,980 + -0.8
Or see this region's nucleotide sequence